Clone LP02965 Report

Search the DGRC for LP02965

Clone and Library Details

Library:LP
Tissue Source:Drosophila melanogaster larval-early pupal
Created by:Ling Hong
Date Registered:1998-06-11
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:29
Well:65
Vector:pOT2
Associated Gene/TranscriptCul4-RA
Protein status:LP02965.pep: gold
Sequenced Size:3381

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8711 2003-01-01 Sim4 clustering to Release 3
cul-4 2008-04-29 Release 5.5 accounting
cul-4 2008-08-15 Release 5.9 accounting
cul-4 2008-12-18 5.12 accounting

Clone Sequence Records

LP02965.complete Sequence

3381 bp (3381 high quality bases) assembled on 2004-12-02

GenBank Submission: BT021374

> LP02965.complete
TGCAACCAAAAGCGAAATAATAAAATGTTGCCTGTGTAATTGTACTTCCG
AAGTTTTGTCGATTTGAATAGTCTCTCAGGCGTCGAAGGAACCCCATTTG
TCCAAAAGGACGCCGTTTGTCGGAGAAATCTACTTCGCAGCCGGAAAATT
CACAGGAAGTCTATTTGCCTTGAGTTCGCAAGTTGCCAATTTCTTGACGA
CCCCAGTGCAAAAGTCGCAAAAATATTACGAATATTTGCTGGTAATCATT
TCAAGGGACTAAGCAAAGCCGGTGCGACGAAAGCAGGGCAGGATCAGGAG
AGCAGGAGCGGAGTGGAGATCCTGCTGGCAGCAGGGGCCCTAAGCTATGA
GTGCGGCCAAGAAGTACAAGCCCATGGACACAACTGAGCTGCACGAGAAC
ACAGAGAATATTGCCGCCTGCCTGAAGAAGGCCGAGAACGTCGCCCCCAC
CGCTGCTGCCGCCTCGAGCGTGGGCCGCAGTGCCTTCGCTGCCCAAAACA
TGAATTCTGCGTCCACCAACGGCGAGCGCCTGCCAAACTTCTCCAAGCTA
GGCGGCAGCCATGGCGAGATCCGCACGGCTTCAACTACCTCAAATCTCCT
CAATCGCATGGGGGCTATTCACAACAGCAAGCCTGGCGATGTCAAGAAGA
TAGTGATTAAGAACTTTAAGGATAAGCCTACACTGCCCGATAACTATTCC
AAGGACACGTACGTGAAGCTTGAAGAAGCCGTTATCGCCATCCAACTCTC
CAAGCCCATTAAATATTCGCTGGAGGAGCTCTACCAGGCGGTGGTGAACA
TGTGTAGCCACAAGATGGATGCACAATTATACGCGAAACTCAAGGAGCTA
ACAGAGCAACACGTAAAGCGCAATATTAAGCTCAAGGAGCTCACCGGCGG
TAGCATGGACAAACTGATTTTGCTGGAAAAGATCAACCACTGGTGGCTCT
CGTTCTGCCAACAAATGATCATGATTCGCAGCATATTCTTGTATATGGAT
CGAACTTATGTGCTGCAAAATTCGACCGTTCACTCGATTTGGGACATGGG
GCTGGACCTTTTTCGCATCCATTTTGCTCAAAACAGCGTTGTCCAAAAGC
GAACCGTCGACGGTTTACTAACGCTTATTGAAAAAGAACGACAAGGCTCC
ACCGTGGACCGTGGTTTGCTGAAGAGCTTGGTTCGCATGTTATGCGACCT
GCAGATCTACACCAGCTCCTTTGAGGAGAAGTTCCTCGACGCAACCAATC
AATTGTATAAGGCTGAGAGTCAACGCAAGATGCAAGAACTGGAAGTTCCC
GAGTACTTACAACACGTCAACAAGCGTTTGGCCGAGGAGAACGAGCGTTT
GCGTCACTATCTGGACTCGAGCACCAAACATCCACTGATTTACAATGTGG
AAAAAGAGTTACTTGCCGAACACCTAACGTCAATATTGCAGAAGGGCTTG
GATTCATTGTTGGAAGACAACAGACTGAGTGACCTTACACTGTTGTACGG
GCTGCTTAGTCGAGTCAAAAATGGAACATCCGAGCTGTGCGGCAATTTCA
ACGGTTTCATTAAGAAAAAGGGACGCACCATTGTCATCGATCCCGAGAAG
GATAAGAGCATGGTCCAAGATTTGCTCGATTTCAAGGACAAAATGGATGT
GATAGTTCGCACCTGCTTTGAGCACAATGAGAAATTCACAAACTCGTTGC
GCGAGGCCTTTGAGTTCTTTATCAACCAACGTGCCAACAAGCCGGCCGAG
CTTATTGCTAAATACGTAGATATGAAACTGCGATCTGGCAACAAGGGAAC
CACAGATGAGGAGTTGGAAAAGACTCTAGATAAAATCATGGTTCTGTTTC
GTTTTATACATGGCAAAGATGTATTTGAAGCGTTTTACAAAAAGGACTTG
GCCAAACGATTACTTGTGGGCAAATCGGCATCAGTGGATTCCGAAAAGAG
TATGCTCTCCAAGCTTAAGCAGGAGTGCGGTGGAGGGTTTACGTCCAAGC
TGGAGGGCATGTTTAAGGACATGGAACTGAGCCGAGATATCAACATTGCG
TTCCGCGGACACGCGTTAAGCAACAACCGCGATGTCCACAACTTGGACTT
GTGCGTCAGCATTCTTACCATGGGCTACTGGCCTACATATGCACCTACAG
AGGTCACAATGCCGCCACAGTTCATCAATCCTCAGCAGATTTTCAACAAA
TTTTATCTGGAAAAGCATAGTGGGCGGAAGTTGCAGTGGCAGCCTACATT
AGGAAATTGTATGCTGCGTGCTCAATTCGATGCGGGACCGAAAGAATTGT
TGGTCTCGCTGTTTCAAGCGCTTGTGCTTCTATTGTTTAACGATAAGCCA
GTTCTGAGCTACGAGGAGATATTGGCCGCCACCCTCATCGAGGATGGAGA
GTTGCGTCGAACACTTCAGTCCCTGGCTTGTGGGCGCGCCCGCGTCATAA
CAAAAACACCGAAAGGCCGCGAAATCTTGGATGGCGATCAGTTTGATTTT
AACAATGAGTTCACAAACAAATTGTTTAGAATCAAGATCAACCAAATACA
GATGAAGGAGACAAATGAGGAGCAAAAGGCGACGGAGGAGCGTGTGTTTC
AGGATCGTCAGTATCAAATTGATGCGGCTATTGTGCGCATTATGAAAATG
CGAAAAACGCTGAGCCATAATCTTCTCATCACCGAGCTGTTCAACCAGCT
TACCTTCCCTGTCAAGCCCGCTGACCTAAAGAAGCGAATCGAGTCGCTCA
TCGACCGCGACTACATGGAGCGAGACAAGGATAATCAAAACCAATACAAC
TATGTGGCATAAATGGCCACAGATTCTGTGAAATCCGAACACCGATTCGA
TTGTAATTCGCTCTATACCATACACATACATACTAGCAGTCTAATGAAGT
TTTTGGAGTGCCCTCGTCCGATCGGCGATGTTCAGAGTTTTTCAGCTGTA
ATTTCGTTTCTATAACTAAATCGTTGAACAATCCGCCAGCTAATAGTGTA
GCGACAGTTCTTTTTGTAAGTTACCTTATCATACAATAAATTAAGCGTTT
ATTTTACAAGCCGAGTCCTTTGAAATAGGTCATCGCCCTCGGAACGTCGA
TGCCTCCAGCAATTTAAAAAAGTTTTCGAACCGAAAGCAAACTAGGTGTT
CAATAAACTTATTTATTGGACTTATTCTAATTTGTTTACTTTTAATTGAT
AATTCTCCTTCAATTAACAATAGAAGTGACATTTGCAGGCTAATTTTCTA
AAGGAAACATTAAAATAATTATAACTCGTACTAGTAGCTCTGTATGCAAA
AAAGAGATACGCATAACTTAATAGTTTTTTATTTACCATAAATAAAAAAT
TACTTGAAAATATAAAAAAAAAAAAAAAAAA

LP02965.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:52:25
Subject Length Description Subject Range Query Range Score Percent Strand
cul-4-RB 3425 cul-4-RB 63..3425 1..3363 16815 100 Plus
cul-4-RA 3362 cul-4-RA 63..3079 1..3017 15085 100 Plus
cul-4-RA 3362 cul-4-RA 3078..3362 3079..3363 1425 100 Plus
CG11210-RA 3120 CG11210-RA 2860..3120 3365..3105 1305 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:55:49
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 3989700..3990348 3363..2715 3230 99.8 Minus
chr2R 21145070 chr2R 3992131..3992592 1377..916 2310 100 Minus
chr2R 21145070 chr2R 3992965..3993380 671..256 2080 100 Minus
chr2R 21145070 chr2R 3990962..3991354 2285..1893 1950 99.7 Minus
chr2R 21145070 chr2R 3990623..3990902 2563..2284 1400 100 Minus
chr2R 21145070 chr2R 3993456..3993712 257..1 1270 99.6 Minus
chr2R 21145070 chr2R 3992653..3992898 916..671 1230 100 Minus
chr2R 21145070 chr2R 3991598..3991796 1761..1563 980 99.5 Minus
chr2R 21145070 chr2R 3991893..3992079 1564..1378 935 100 Minus
chr2R 21145070 chr2R 3990410..3990562 2716..2564 750 99.3 Minus
chr2R 21145070 chr2R 3991406..3991544 1895..1757 680 99.3 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:47:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:55:47
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8102258..8102908 3365..2715 3255 100 Minus
2R 25286936 2R 8104691..8105152 1377..916 2310 100 Minus
2R 25286936 2R 8105525..8105940 671..256 2080 100 Minus
2R 25286936 2R 8103522..8103914 2285..1893 1965 100 Minus
2R 25286936 2R 8103183..8103462 2563..2284 1400 100 Minus
2R 25286936 2R 8106016..8106272 257..1 1285 100 Minus
2R 25286936 2R 8105213..8105458 916..671 1230 100 Minus
2R 25286936 2R 8104158..8104356 1761..1563 980 99.5 Minus
2R 25286936 2R 8104453..8104639 1564..1378 935 100 Minus
2R 25286936 2R 8102970..8103122 2716..2564 765 100 Minus
2R 25286936 2R 8103966..8104104 1895..1757 695 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:41:34
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 8103457..8104107 3365..2715 3255 100 Minus
2R 25260384 2R 8105890..8106351 1377..916 2310 100 Minus
2R 25260384 2R 8106724..8107139 671..256 2080 100 Minus
2R 25260384 2R 8104721..8105113 2285..1893 1965 100 Minus
2R 25260384 2R 8104382..8104661 2563..2284 1400 100 Minus
2R 25260384 2R 8107215..8107471 257..1 1285 100 Minus
2R 25260384 2R 8106412..8106657 916..671 1230 100 Minus
2R 25260384 2R 8105357..8105555 1761..1563 980 99.4 Minus
2R 25260384 2R 8105652..8105838 1564..1378 935 100 Minus
2R 25260384 2R 8104169..8104321 2716..2564 765 100 Minus
2R 25260384 2R 8105165..8105303 1895..1757 695 100 Minus
Blast to na_te.dros performed 2019-03-15 13:55:47
Subject Length Description Subject Range Query Range Score Percent Strand
HeT-A 6083 HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). 3719..3790 2513..2583 124 67.6 Plus
Tabor 7345 Tabor TABOR 7345bp 5164..5212 3313..3362 121 74 Plus

LP02965.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:56:32 Download gff for LP02965.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 3991893..3992079 1378..1564 100 <- Minus
chr2R 3989700..3990346 2717..3363 99 <- Minus
chr2R 3990410..3990562 2564..2716 99 <- Minus
chr2R 3990623..3990901 2285..2563 100 <- Minus
chr2R 3990963..3991352 1895..2284 99 <- Minus
chr2R 3991407..3991543 1758..1894 99 <- Minus
chr2R 3991602..3991794 1565..1757 100 <- Minus
chr2R 3992131..3992591 917..1377 100 <- Minus
chr2R 3992653..3992897 672..916 100 <- Minus
chr2R 3992965..3993379 257..671 100 <- Minus
chr2R 3993457..3993712 1..256 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:34:25 Download gff for LP02965.complete
Subject Subject Range Query Range Percent Splice Strand
cul-4-RA 1..2466 347..2812 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:24:18 Download gff for LP02965.complete
Subject Subject Range Query Range Percent Splice Strand
Cul-4-RB 1..2466 347..2812 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:17:27 Download gff for LP02965.complete
Subject Subject Range Query Range Percent Splice Strand
Cul-4-RA 1..2466 347..2812 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:08:31 Download gff for LP02965.complete
Subject Subject Range Query Range Percent Splice Strand
cul-4-RA 1..2466 347..2812 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:45:36 Download gff for LP02965.complete
Subject Subject Range Query Range Percent Splice Strand
Cul4-RA 1..2466 347..2812 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:26:17 Download gff for LP02965.complete
Subject Subject Range Query Range Percent Splice Strand
cul-4-RA 38..3054 1..3017 100 == Plus
cul-4-RA 3055..3337 3081..3363 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:24:17 Download gff for LP02965.complete
Subject Subject Range Query Range Percent Splice Strand
Cul-4-RB 43..3405 1..3363 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:17:27 Download gff for LP02965.complete
Subject Subject Range Query Range Percent Splice Strand
Cul-4-RB 43..3405 1..3363 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:08:31 Download gff for LP02965.complete
Subject Subject Range Query Range Percent Splice Strand
cul-4-RA 38..3054 1..3017 100 == Plus
cul-4-RA 3055..3337 3081..3363 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:45:36 Download gff for LP02965.complete
Subject Subject Range Query Range Percent Splice Strand
Cul4-RB 43..3405 1..3363 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:56:32 Download gff for LP02965.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8105213..8105457 672..916 100 <- Minus
2R 8106017..8106272 1..256 100   Minus
2R 8105525..8105939 257..671 100 <- Minus
2R 8102260..8102906 2717..3363 100 <- Minus
2R 8102970..8103122 2564..2716 100 <- Minus
2R 8103183..8103461 2285..2563 100 <- Minus
2R 8103523..8103912 1895..2284 100 <- Minus
2R 8103967..8104103 1758..1894 100 <- Minus
2R 8104162..8104354 1565..1757 100 <- Minus
2R 8104453..8104639 1378..1564 100 <- Minus
2R 8104691..8105151 917..1377 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:56:32 Download gff for LP02965.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8105213..8105457 672..916 100 <- Minus
2R 8106017..8106272 1..256 100   Minus
2R 8105525..8105939 257..671 100 <- Minus
2R 8102260..8102906 2717..3363 100 <- Minus
2R 8102970..8103122 2564..2716 100 <- Minus
2R 8103183..8103461 2285..2563 100 <- Minus
2R 8103523..8103912 1895..2284 100 <- Minus
2R 8103967..8104103 1758..1894 100 <- Minus
2R 8104162..8104354 1565..1757 100 <- Minus
2R 8104453..8104639 1378..1564 100 <- Minus
2R 8104691..8105151 917..1377 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:56:32 Download gff for LP02965.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8105213..8105457 672..916 100 <- Minus
2R 8106017..8106272 1..256 100   Minus
2R 8105525..8105939 257..671 100 <- Minus
2R 8102260..8102906 2717..3363 100 <- Minus
2R 8102970..8103122 2564..2716 100 <- Minus
2R 8103183..8103461 2285..2563 100 <- Minus
2R 8103523..8103912 1895..2284 100 <- Minus
2R 8103967..8104103 1758..1894 100 <- Minus
2R 8104162..8104354 1565..1757 100 <- Minus
2R 8104453..8104639 1378..1564 100 <- Minus
2R 8104691..8105151 917..1377 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:17:27 Download gff for LP02965.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3992718..3992962 672..916 100 <- Minus
arm_2R 3991667..3991859 1565..1757 100 <- Minus
arm_2R 3991958..3992144 1378..1564 100 <- Minus
arm_2R 3989765..3990411 2717..3363 100 <- Minus
arm_2R 3990475..3990627 2564..2716 100 <- Minus
arm_2R 3990688..3990966 2285..2563 100 <- Minus
arm_2R 3991028..3991417 1895..2284 100 <- Minus
arm_2R 3991472..3991608 1758..1894 100 <- Minus
arm_2R 3992196..3992656 917..1377 100 <- Minus
arm_2R 3993030..3993444 257..671 100 <- Minus
arm_2R 3993522..3993777 1..256 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:44:45 Download gff for LP02965.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8106412..8106656 672..916 100 <- Minus
2R 8103459..8104105 2717..3363 100 <- Minus
2R 8104169..8104321 2564..2716 100 <- Minus
2R 8104382..8104660 2285..2563 100 <- Minus
2R 8104722..8105111 1895..2284 100 <- Minus
2R 8105166..8105302 1758..1894 100 <- Minus
2R 8105361..8105553 1565..1757 100 <- Minus
2R 8105652..8105838 1378..1564 100 <- Minus
2R 8105890..8106350 917..1377 100 <- Minus
2R 8106724..8107138 257..671 100 <- Minus
2R 8107216..8107471 1..256 100   Minus

LP02965.pep Sequence

Translation from 346 to 2811

> LP02965.pep
MSAAKKYKPMDTTELHENTENIAACLKKAENVAPTAAAASSVGRSAFAAQ
NMNSASTNGERLPNFSKLGGSHGEIRTASTTSNLLNRMGAIHNSKPGDVK
KIVIKNFKDKPTLPDNYSKDTYVKLEEAVIAIQLSKPIKYSLEELYQAVV
NMCSHKMDAQLYAKLKELTEQHVKRNIKLKELTGGSMDKLILLEKINHWW
LSFCQQMIMIRSIFLYMDRTYVLQNSTVHSIWDMGLDLFRIHFAQNSVVQ
KRTVDGLLTLIEKERQGSTVDRGLLKSLVRMLCDLQIYTSSFEEKFLDAT
NQLYKAESQRKMQELEVPEYLQHVNKRLAEENERLRHYLDSSTKHPLIYN
VEKELLAEHLTSILQKGLDSLLEDNRLSDLTLLYGLLSRVKNGTSELCGN
FNGFIKKKGRTIVIDPEKDKSMVQDLLDFKDKMDVIVRTCFEHNEKFTNS
LREAFEFFINQRANKPAELIAKYVDMKLRSGNKGTTDEELEKTLDKIMVL
FRFIHGKDVFEAFYKKDLAKRLLVGKSASVDSEKSMLSKLKQECGGGFTS
KLEGMFKDMELSRDINIAFRGHALSNNRDVHNLDLCVSILTMGYWPTYAP
TEVTMPPQFINPQQIFNKFYLEKHSGRKLQWQPTLGNCMLRAQFDAGPKE
LLVSLFQALVLLLFNDKPVLSYEEILAATLIEDGELRRTLQSLACGRARV
ITKTPKGREILDGDQFDFNNEFTNKLFRIKINQIQMKETNEEQKATEERV
FQDRQYQIDAAIVRIMKMRKTLSHNLLITELFNQLTFPVKPADLKKRIES
LIDRDYMERDKDNQNQYNYVA*

LP02965.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 17:05:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11213-PA 821 GF11213-PA 1..821 1..821 4212 96.1 Plus
Dana\GF14531-PA 874 GF14531-PA 123..874 112..821 1159 36.7 Plus
Dana\GF13641-PA 775 GF13641-PA 105..775 191..821 796 32.1 Plus
Dana\GF15487-PA 748 GF15487-PA 53..748 157..821 649 28.3 Plus
Dana\GF18726-PA 840 GF18726-PA 217..840 249..821 543 28.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:05:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10678-PA 821 GG10678-PA 1..821 1..821 4400 99.5 Plus
Dere\GG24216-PA 1027 GG24216-PA 276..1027 112..821 1158 36.7 Plus
Dere\GG23311-PA 858 GG23311-PA 161..858 160..821 797 31.4 Plus
Dere\GG21342-PA 753 GG21342-PA 53..753 157..821 635 28.3 Plus
Dere\GG12041-PA 852 GG12041-PA 229..852 249..821 535 28.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 17:05:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19988-PA 826 GH19988-PA 1..826 1..821 4079 92.9 Plus
Dgri\GH13125-PA 990 GH13125-PA 185..990 63..821 1140 34.6 Plus
Dgri\GH21298-PA 773 GH21298-PA 105..773 191..821 749 31.1 Plus
Dgri\GH10784-PA 756 GH10784-PA 24..756 131..821 644 28 Plus
Dgri\GH18911-PA 858 GH18911-PA 235..858 249..821 534 28.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:10:44
Subject Length Description Subject Range Query Range Score Percent Strand
Cul4-PB 821 CG8711-PB 1..821 1..821 4205 100 Plus
Cul4-PA 821 CG8711-PA 1..821 1..821 4205 100 Plus
Cul3-PE 773 CG11861-PB 22..773 112..821 1159 37 Plus
Cul3-PC 773 CG11861-PA 22..773 112..821 1159 37 Plus
Cul3-PD 773 CG11861-PC 22..773 112..821 1159 37 Plus
Cul3-PF 934 CG42615-PF 183..934 112..821 1159 37 Plus
Cul1-PD 774 CG1877-PD 77..774 160..821 826 31.4 Plus
Cul1-PA 774 CG1877-PA 77..774 160..821 826 31.4 Plus
Cul1-PB 774 CG1877-PB 77..774 160..821 826 31.4 Plus
Cul1-PC 774 CG1877-PC 77..774 160..821 826 31.4 Plus
Cul2-PB 753 CG1512-PB 53..753 157..821 666 28.1 Plus
Cul2-PA 753 CG1512-PA 53..753 157..821 666 28.1 Plus
Cul5-PA 852 CG1401-PA 229..852 249..821 558 27.3 Plus
CG11261-PA 670 CG11261-PA 327..670 466..820 207 24 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 17:05:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20275-PA 822 GI20275-PA 1..822 1..821 4129 93.6 Plus
Dmoj\GI22726-PA 1023 GI22726-PA 272..1023 112..821 1141 35.9 Plus
Dmoj\GI19786-PA 827 GI19786-PA 159..827 191..821 760 31.4 Plus
Dmoj\GI17442-PA 757 GI17442-PA 53..757 157..821 623 28.1 Plus
Dmoj\GI23410-PA 834 GI23410-PA 211..834 249..821 535 28.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 17:05:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17383-PA 816 GL17383-PA 1..816 1..821 4158 94.3 Plus
Dper\GL26600-PA 1008 GL26600-PA 257..1008 112..821 1156 36.8 Plus
Dper\GL11695-PA 774 GL11695-PA 76..774 160..821 820 31.9 Plus
Dper\GL25796-PA 756 GL25796-PA 24..756 131..821 635 27.7 Plus
Dper\GL23281-PA 846 GL23281-PA 223..846 249..821 533 28.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 17:05:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21273-PA 816 GA21273-PA 1..816 1..821 4158 94.3 Plus
Dpse\GA16511-PA 1008 GA16511-PA 257..1008 112..821 1157 36.8 Plus
Dpse\GA15074-PB 774 GA15074-PB 76..774 160..821 820 31.9 Plus
Dpse\GA13508-PA 756 GA13508-PA 24..756 131..821 635 27.7 Plus
Dpse\GA12695-PA 848 GA12695-PA 225..848 249..821 536 28.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:05:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20725-PA 698 GM20725-PA 1..667 1..668 3492 97.5 Plus
Dsec\GM14478-PA 1028 GM14478-PA 277..1028 112..821 1160 36.9 Plus
Dsec\GM20989-PA 774 GM20989-PA 77..774 160..821 798 31.4 Plus
Dsec\GM16141-PA 753 GM16141-PA 53..753 157..821 640 28.4 Plus
Dsec\GM12268-PA 766 GM12268-PA 229..710 249..695 450 28.4 Plus
Dsec\GM20725-PA 698 GM20725-PA 668..698 791..821 169 100 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:05:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21965-PA 1003 GD21965-PA 277..1003 112..821 1097 36.1 Plus
Dsim\GD10516-PA 774 GD10516-PA 77..774 160..821 798 31.4 Plus
Dsim\GD24329-PA 753 GD24329-PA 53..753 157..821 637 28.4 Plus
Dsim\GD12683-PA 660 GD12683-PA 325..659 466..817 226 26.3 Plus
Dsim\GD17999-PA 387 GD17999-PA 229..382 249..395 163 28.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 17:05:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20228-PA 821 GJ20228-PA 1..821 1..821 4103 93.1 Plus
Dvir\GJ23288-PA 985 GJ23288-PA 234..985 112..821 1143 36.1 Plus
Dvir\GJ17750-PA 773 GJ17750-PA 77..773 160..821 756 30.7 Plus
Dvir\GJ14230-PA 756 GJ14230-PA 24..756 131..821 650 28 Plus
Dvir\GJ10616-PA 836 GJ10616-PA 213..836 249..821 537 28.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 17:05:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23161-PA 821 GK23161-PA 1..821 1..821 4157 94.5 Plus
Dwil\GK18258-PA 775 GK18258-PA 3..775 91..821 1167 36.4 Plus
Dwil\GK21971-PA 775 GK21971-PA 96..775 178..821 798 31.9 Plus
Dwil\GK22602-PA 840 GK22602-PA 217..840 249..821 531 28.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:05:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23323-PA 821 GE23323-PA 1..821 1..821 4379 98.9 Plus
Dyak\GE19410-PA 1027 GE19410-PA 276..1027 112..821 1157 36.7 Plus
Dyak\GE19156-PA 774 GE19156-PA 77..774 160..821 797 31.4 Plus
Dyak\GE12924-PA 753 GE12924-PA 53..753 157..821 633 28.3 Plus
Dyak\GE10480-PA 852 GE10480-PA 229..852 249..821 536 28.2 Plus

LP02965.hyp Sequence

Translation from 346 to 2811

> LP02965.hyp
MSAAKKYKPMDTTELHENTENIAACLKKAENVAPTAAAASSVGRSAFAAQ
NMNSASTNGERLPNFSKLGGSHGEIRTASTTSNLLNRMGAIHNSKPGDVK
KIVIKNFKDKPTLPDNYSKDTYVKLEEAVIAIQLSKPIKYSLEELYQAVV
NMCSHKMDAQLYAKLKELTEQHVKRNIKLKELTGGSMDKLILLEKINHWW
LSFCQQMIMIRSIFLYMDRTYVLQNSTVHSIWDMGLDLFRIHFAQNSVVQ
KRTVDGLLTLIEKERQGSTVDRGLLKSLVRMLCDLQIYTSSFEEKFLDAT
NQLYKAESQRKMQELEVPEYLQHVNKRLAEENERLRHYLDSSTKHPLIYN
VEKELLAEHLTSILQKGLDSLLEDNRLSDLTLLYGLLSRVKNGTSELCGN
FNGFIKKKGRTIVIDPEKDKSMVQDLLDFKDKMDVIVRTCFEHNEKFTNS
LREAFEFFINQRANKPAELIAKYVDMKLRSGNKGTTDEELEKTLDKIMVL
FRFIHGKDVFEAFYKKDLAKRLLVGKSASVDSEKSMLSKLKQECGGGFTS
KLEGMFKDMELSRDINIAFRGHALSNNRDVHNLDLCVSILTMGYWPTYAP
TEVTMPPQFINPQQIFNKFYLEKHSGRKLQWQPTLGNCMLRAQFDAGPKE
LLVSLFQALVLLLFNDKPVLSYEEILAATLIEDGELRRTLQSLACGRARV
ITKTPKGREILDGDQFDFNNEFTNKLFRIKINQIQMKETNEEQKATEERV
FQDRQYQIDAAIVRIMKMRKTLSHNLLITELFNQLTFPVKPADLKKRIES
LIDRDYMERDKDNQNQYNYVA*

LP02965.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:55:05
Subject Length Description Subject Range Query Range Score Percent Strand
Cul4-PB 821 CG8711-PB 1..821 1..821 4205 100 Plus
Cul4-PA 821 CG8711-PA 1..821 1..821 4205 100 Plus
Cul3-PE 773 CG11861-PB 22..773 112..821 1159 37 Plus
Cul3-PC 773 CG11861-PA 22..773 112..821 1159 37 Plus
Cul3-PD 773 CG11861-PC 22..773 112..821 1159 37 Plus