BDGP Sequence Production Resources |
Search the DGRC for LP03005
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 30 |
Well: | 5 |
Vector: | pOT2 |
Associated Gene/Transcript | vanin-like-RA |
Protein status: | LP03005.pep: gold |
Preliminary Size: | 1801 |
Sequenced Size: | 1892 |
Gene | Date | Evidence |
---|---|---|
CG3648 | 2001-01-01 | Release 2 assignment |
CG32754 | 2001-07-04 | Blastp of sequenced clone |
CG32754 | 2003-01-01 | Sim4 clustering to Release 3 |
vanin-like | 2008-04-29 | Release 5.5 accounting |
vanin-like | 2008-08-15 | Release 5.9 accounting |
vanin-like | 2008-12-18 | 5.12 accounting |
1892 bp (1892 high quality bases) assembled on 2001-07-04
GenBank Submission: AY052034
> LP03005.complete CTCAGGCTCCATACGAAATGTCGAATACCTGGTGGTGGCTTTCAGTAGTG TTACTAATCTTAGGGCTAATGCCTGGCATGAGTCAGCAGGCGGCCCTGGC CGAATCGGATTACTATACGGCCGGAGTGGTGGAGTTCAAACAGTCGATCT TAAGTCTATCGGCCTGGTCGGATTCCCTTGCTGGCTATGTGGAGATCATA AACTCTGAGAACGCCAGTGCCACCGACATCATTGTGTTTCCCGAGAGCAC ACTGAACTCCGCGGGTTCCACGACCTTTGTGCCCAATCCCGAGGATCAGA TAAACCCGTGTTTGAGTGACCCCAATGCCACCTACTATGAGGAGTTTCTG GTGACCCTGTCGTGCGCGGCCCGCAATGCCAGTAAATACATTGTGATCAA TCTGACCGAGAAGCAAAAGTGCGAGGATATTCCCGAGGATACGAGGCCAT GTGCATCTAACGGACTGAATGTTTTCAACACCAATGTAGTGTTCGATCGT CAGGGAGTCGTGGTGTCCAGGTACCGAAAGGTTCATCTCTATGGTGAAGC AAAGAACAGCACTTTTCTGCCCGAGCTGATCACCTTCGAGACAGACTTTG GGGTCACCTTCGGTCATTTCATCTGCTTCGACATCCTGTTCTACACTCCC GCCCATCAACTCATCGTGGAGCAGGGTATTACGGACTTCGTGTATCCGGC CATGTGGTTCTCCCAACTGCCCTTCCTCACGGCTGTTCAGACGCAACAAG GTTGGGCCTATGCCAACGATGTGAATCTCCTGGCGTCTGGAGCCAGTCGT CCCTCCATTGGCAATAGTGGATCGGGCATCTATCACGGACGTTCCGGCAC TTTGACCAGTGTCATGCGCCAGGACTCCGGCGAGAGGGCCATCTATGTGG CCCAGGTGCCCAAGTATACTCGCAGTAGATCCCTGAAGAAACGTGCGAAG AGGAGTCTACAGGAGATCCAAACCCGTCAGGTGGCCTCAAGCTCGAGTTT CTACATGAAGCGCGATTACGTGGAGAACTATGAGTCTGAGTTGCTCAAGT TGGACGAGGGAACTAGTGGTGCTATCAATAGAACCATCTGCCAGGGCAGC TTTTGCTGTAACTTCGACATAGCGTGGAGATCCTTGGGTACAGCGACGGA GAATGGTAGCTACTATAGCTATCGATTGGGAACCTACGATGGCTGGCGCA ACGAGAACAATGTGGATGCCAATTACATACGTAATTGTGCGCTGTTCACC TGTTCTGGGGACTCCATCGATGATTGTGGCAAACTATTGCCCACCGAGGG TGAGCTTCAGCAGTCGCGAGTGACTTTCACGCGCCTGGCGATCGGTGTTA CCTATCCAGAGTCACGGGAGTTTCTGCTATTTCCGGACACCCTGCAAGAT AGTTTGCTGCCCCTGGAACCGAGCCAGTTTGAATGGTCTCAGCGAAAGCC CACGGAAGATAGCTATGTCCAAGAAGTTCGCTTTGCCCTGAAGGAAACCC AGGAGCTGAGCAATCTGTTGACCTTTGGCATCTATGGAAATTACTACGAC AATGAGTGTACATTTGGTGTTGGCACCGAAGAGGAGCAGCTGGCCTGCGG CTATAGAAGCGGATCCCCCGGACTGAGAATCCTTGGGGGTTGGCTAGCAA TGCCGCTGATTATCCTGGCTATTGCCAGGACAATGAGTTCATAAGATCAA AGTGACACGGGTGTCTTAGGCATTTTAAGTCAAATGTCGTAGGGTTCACA TGACGTTGGATTCTTATTTTTTATTTTTTTTTTTACTTACTTCTAATGCT CGATATTAACAGTATTTATATTAAGCAGTCAAAAATAAAAAATGCTCTCG ACTTGTTGATAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
vanin-like-RA | 1931 | vanin-like-RA | 59..1923 | 1..1865 | 9325 | 100 | Plus |
CG32751-RA | 1740 | CG32751-RA | 162..823 | 180..841 | 2575 | 92.5 | Plus |
CG32751.a | 1589 | CG32751.a | 162..712 | 180..730 | 2350 | 95 | Plus |
CG32751.a | 1589 | CG32751.a | 756..847 | 750..841 | 235 | 83.6 | Plus |
CG32751.a | 1589 | CG32751.a | 1485..1572 | 1518..1605 | 215 | 82.9 | Plus |
CG32751-RA | 1740 | CG32751-RA | 1461..1548 | 1518..1605 | 215 | 82.9 | Plus |
CG32751.a | 1589 | CG32751.a | 1144..1261 | 1162..1279 | 170 | 76.2 | Plus |
CG32751-RA | 1740 | CG32751-RA | 1120..1237 | 1162..1279 | 170 | 76.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 6092816..6093550 | 1462..728 | 3660 | 99.9 | Minus |
chrX | 22417052 | chrX | 6093928..6094573 | 732..87 | 3170 | 99.4 | Minus |
chrX | 22417052 | chrX | 6090037..6090587 | 730..180 | 2320 | 94.7 | Minus |
chrX | 22417052 | chrX | 6092351..6092755 | 1864..1460 | 2010 | 99.8 | Minus |
chrX | 22417052 | chrX | 6094634..6094723 | 90..1 | 435 | 98.9 | Minus |
chrX | 22417052 | chrX | 6089622..6089785 | 913..750 | 280 | 78 | Minus |
chrX | 22417052 | chrX | 6088917..6089003 | 1604..1518 | 210 | 82.8 | Minus |
chrX | 22417052 | chrX | 6110698..6110751 | 643..590 | 195 | 90.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 6200653..6201387 | 1462..728 | 3660 | 99.9 | Minus |
X | 23542271 | X | 6201764..6202409 | 732..87 | 3230 | 100 | Minus |
X | 23542271 | X | 6197862..6198412 | 730..180 | 2350 | 95.1 | Minus |
X | 23542271 | X | 6200187..6200592 | 1865..1460 | 2030 | 100 | Minus |
X | 23542271 | X | 6202470..6202559 | 90..1 | 450 | 100 | Minus |
X | 23542271 | X | 6197447..6197610 | 913..750 | 280 | 78 | Minus |
X | 23542271 | X | 6196741..6196828 | 1605..1518 | 215 | 83 | Minus |
X | 23542271 | X | 6218525..6218578 | 643..590 | 195 | 90.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 6208751..6209485 | 1462..728 | 3660 | 99.8 | Minus |
X | 23527363 | X | 6209862..6210507 | 732..87 | 3230 | 100 | Minus |
X | 23527363 | X | 6205960..6206510 | 730..180 | 2350 | 95 | Minus |
X | 23527363 | X | 6208285..6208690 | 1865..1460 | 2030 | 100 | Minus |
X | 23527363 | X | 6210568..6210657 | 90..1 | 450 | 100 | Minus |
X | 23527363 | X | 6205617..6205708 | 841..750 | 235 | 83.6 | Minus |
X | 23527363 | X | 6204839..6204926 | 1605..1518 | 215 | 82.9 | Minus |
X | 23527363 | X | 6226623..6226676 | 643..590 | 195 | 90.7 | Minus |
X | 23527363 | X | 6205203..6205320 | 1279..1162 | 170 | 76.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 6092351..6092752 | 1463..1864 | 94 | <- | Minus |
chrX | 6092816..6093545 | 733..1462 | 100 | <- | Minus |
chrX | 6093928..6094570 | 90..732 | 99 | <- | Minus |
chrX | 6094635..6094723 | 1..89 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vanin-like-RA | 1..1677 | 18..1694 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vanin-like-RA | 1..1677 | 18..1694 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vanin-like-RA | 1..1677 | 18..1694 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vanin-like-RA | 1..1677 | 18..1694 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vanin-like-RA | 1..1677 | 18..1694 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vanin-like-RA | 1..1864 | 1..1864 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vanin-like-RA | 1..1864 | 1..1864 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vanin-like-RA | 1..1864 | 1..1864 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vanin-like-RA | 1..1864 | 1..1864 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vanin-like-RA | 1..1864 | 1..1864 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6200188..6200589 | 1463..1864 | 100 | <- | Minus |
X | 6200653..6201382 | 733..1462 | 100 | <- | Minus |
X | 6201764..6202406 | 90..732 | 100 | <- | Minus |
X | 6202471..6202559 | 1..89 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6200188..6200589 | 1463..1864 | 100 | <- | Minus |
X | 6200653..6201382 | 733..1462 | 100 | <- | Minus |
X | 6201764..6202406 | 90..732 | 100 | <- | Minus |
X | 6202471..6202559 | 1..89 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6200188..6200589 | 1463..1864 | 100 | <- | Minus |
X | 6200653..6201382 | 733..1462 | 100 | <- | Minus |
X | 6201764..6202406 | 90..732 | 100 | <- | Minus |
X | 6202471..6202559 | 1..89 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 6094221..6094622 | 1463..1864 | 100 | <- | Minus |
arm_X | 6094686..6095415 | 733..1462 | 100 | <- | Minus |
arm_X | 6095797..6096439 | 90..732 | 100 | <- | Minus |
arm_X | 6096504..6096592 | 1..89 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6208286..6208687 | 1463..1864 | 100 | <- | Minus |
X | 6208751..6209480 | 733..1462 | 100 | <- | Minus |
X | 6209862..6210504 | 90..732 | 100 | <- | Minus |
X | 6210569..6210657 | 1..89 | 100 | Minus |
Translation from 2 to 1693
> LP03005.hyp QAPYEMSNTWWWLSVVLLILGLMPGMSQQAALAESDYYTAGVVEFKQSIL SLSAWSDSLAGYVEIINSENASATDIIVFPESTLNSAGSTTFVPNPEDQI NPCLSDPNATYYEEFLVTLSCAARNASKYIVINLTEKQKCEDIPEDTRPC ASNGLNVFNTNVVFDRQGVVVSRYRKVHLYGEAKNSTFLPELITFETDFG VTFGHFICFDILFYTPAHQLIVEQGITDFVYPAMWFSQLPFLTAVQTQQG WAYANDVNLLASGASRPSIGNSGSGIYHGRSGTLTSVMRQDSGERAIYVA QVPKYTRSRSLKKRAKRSLQEIQTRQVASSSSFYMKRDYVENYESELLKL DEGTSGAINRTICQGSFCCNFDIAWRSLGTATENGSYYSYRLGTYDGWRN ENNVDANYIRNCALFTCSGDSIDDCGKLLPTEGELQQSRVTFTRLAIGVT YPESREFLLFPDTLQDSLLPLEPSQFEWSQRKPTEDSYVQEVRFALKETQ ELSNLLTFGIYGNYYDNECTFGVGTEEEQLACGYRSGSPGLRILGGWLAM PLIILAIARTMSS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
vanin-like-PA | 558 | CG32754-PA | 1..558 | 6..563 | 2927 | 100 | Plus |
CG32751-PA | 517 | CG32751-PA | 1..514 | 6..536 | 2071 | 73.8 | Plus |
CG32751-PB | 525 | CG32751-PB | 1..522 | 6..536 | 2052 | 72.7 | Plus |
CG32750-PA | 523 | CG32750-PA | 25..502 | 34..524 | 832 | 40.7 | Plus |
Btd-PA | 553 | CG3599-PA | 4..508 | 13..515 | 830 | 39.6 | Plus |
Translation from 17 to 1693
> LP03005.pep MSNTWWWLSVVLLILGLMPGMSQQAALAESDYYTAGVVEFKQSILSLSAW SDSLAGYVEIINSENASATDIIVFPESTLNSAGSTTFVPNPEDQINPCLS DPNATYYEEFLVTLSCAARNASKYIVINLTEKQKCEDIPEDTRPCASNGL NVFNTNVVFDRQGVVVSRYRKVHLYGEAKNSTFLPELITFETDFGVTFGH FICFDILFYTPAHQLIVEQGITDFVYPAMWFSQLPFLTAVQTQQGWAYAN DVNLLASGASRPSIGNSGSGIYHGRSGTLTSVMRQDSGERAIYVAQVPKY TRSRSLKKRAKRSLQEIQTRQVASSSSFYMKRDYVENYESELLKLDEGTS GAINRTICQGSFCCNFDIAWRSLGTATENGSYYSYRLGTYDGWRNENNVD ANYIRNCALFTCSGDSIDDCGKLLPTEGELQQSRVTFTRLAIGVTYPESR EFLLFPDTLQDSLLPLEPSQFEWSQRKPTEDSYVQEVRFALKETQELSNL LTFGIYGNYYDNECTFGVGTEEEQLACGYRSGSPGLRILGGWLAMPLIIL AIARTMSS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20308-PA | 555 | GF20308-PA | 6..550 | 4..552 | 2278 | 74.9 | Plus |
Dana\GF20307-PA | 544 | GF20307-PA | 8..544 | 8..553 | 1926 | 67 | Plus |
Dana\GF20306-PA | 560 | GF20306-PA | 4..513 | 8..512 | 821 | 37.5 | Plus |
Dana\GF20309-PA | 523 | GF20309-PA | 6..516 | 15..546 | 783 | 38.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17690-PA | 556 | GG17690-PA | 1..554 | 1..554 | 2741 | 91.3 | Plus |
Dere\GG17692-PA | 524 | GG17692-PA | 26..503 | 29..519 | 876 | 42 | Plus |
Dere\GG17689-PA | 563 | GG17689-PA | 19..552 | 23..552 | 847 | 38.2 | Plus |
Dere\GG17691-PA | 171 | GG17691-PA | 36..88 | 185..238 | 243 | 85.2 | Plus |
Dere\GG17691-PA | 171 | GG17691-PA | 89..168 | 418..515 | 191 | 45.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24839-PA | 575 | GH24839-PA | 32..567 | 20..547 | 1650 | 56.7 | Plus |
Dgri\GH24838-PA | 559 | GH24838-PA | 18..507 | 22..510 | 904 | 40 | Plus |
Dgri\GH24840-PA | 544 | GH24840-PA | 5..496 | 7..511 | 834 | 40.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
vanin-like-PA | 558 | CG32754-PA | 1..558 | 1..558 | 2927 | 100 | Plus |
CG32751-PA | 517 | CG32751-PA | 1..514 | 1..531 | 2071 | 73.8 | Plus |
CG32751-PB | 525 | CG32751-PB | 1..522 | 1..531 | 2052 | 72.7 | Plus |
CG32750-PA | 523 | CG32750-PA | 25..502 | 29..519 | 832 | 40.7 | Plus |
Btnd-PA | 553 | CG3599-PA | 4..508 | 8..510 | 830 | 39.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16173-PA | 570 | GI16173-PA | 26..565 | 21..552 | 1587 | 55.4 | Plus |
Dmoj\GI16172-PA | 566 | GI16172-PA | 8..559 | 7..553 | 1573 | 53.8 | Plus |
Dmoj\GI16171-PA | 570 | GI16171-PA | 15..562 | 12..549 | 1558 | 53.3 | Plus |
Dmoj\GI16170-PA | 543 | GI16170-PA | 24..499 | 29..510 | 907 | 41.9 | Plus |
Dmoj\GI16174-PA | 558 | GI16174-PA | 22..513 | 28..511 | 808 | 39.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21361-PA | 552 | GL21361-PA | 3..540 | 2..541 | 1886 | 66.5 | Plus |
Dper\GL21362-PA | 523 | GL21362-PA | 6..490 | 7..511 | 832 | 39.2 | Plus |
Dper\GL21358-PA | 465 | GL21358-PA | 108..400 | 219..510 | 423 | 36.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17117-PA | 552 | GA17117-PA | 3..540 | 2..541 | 1880 | 66.4 | Plus |
Dpse\GA17549-PA | 592 | GA17549-PA | 22..527 | 8..510 | 851 | 39.4 | Plus |
Dpse\GA23775-PA | 524 | GA23775-PA | 6..491 | 7..511 | 836 | 39.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12589-PA | 558 | GM12589-PA | 1..558 | 1..558 | 2860 | 95.5 | Plus |
Dsec\GM12590-PA | 482 | GM12590-PA | 1..479 | 1..531 | 1883 | 67.2 | Plus |
Dsec\GM12591-PA | 523 | GM12591-PA | 25..522 | 29..554 | 847 | 39.7 | Plus |
Dsec\GM12588-PA | 336 | GM12588-PA | 4..144 | 8..150 | 187 | 35.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16207-PA | 558 | GD16207-PA | 1..558 | 1..558 | 2870 | 95.9 | Plus |
Dsim\GD16208-PA | 516 | GD16208-PA | 1..513 | 1..531 | 2093 | 73.3 | Plus |
Dsim\GD16209-PA | 523 | GD16209-PA | 25..508 | 29..525 | 852 | 40.9 | Plus |
Dsim\GD16205-PA | 553 | GD16205-PA | 4..508 | 8..510 | 852 | 39.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16663-PA | 591 | GJ16663-PA | 47..591 | 20..558 | 1631 | 55.8 | Plus |
Dvir\GJ16662-PA | 572 | GJ16662-PA | 8..513 | 12..510 | 897 | 40 | Plus |
Dvir\GJ16664-PA | 540 | GJ16664-PA | 22..499 | 28..511 | 815 | 39.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15353-PA | 572 | GK15353-PA | 16..563 | 8..550 | 1795 | 60.9 | Plus |
Dwil\GK17695-PA | 556 | GK17695-PA | 9..489 | 26..510 | 859 | 41 | Plus |
Dwil\GK15373-PA | 592 | GK15373-PA | 20..490 | 28..513 | 759 | 38.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16478-PA | 556 | GE16478-PA | 1..554 | 1..554 | 2707 | 92.1 | Plus |
Dyak\GE16479-PA | 516 | GE16479-PA | 1..513 | 1..531 | 2033 | 71 | Plus |
Dyak\GE16480-PA | 525 | GE16480-PA | 25..494 | 29..511 | 858 | 42.1 | Plus |
Dyak\GE16477-PA | 553 | GE16477-PA | 18..508 | 22..510 | 837 | 39.3 | Plus |