BDGP Sequence Production Resources |
Search the DGRC for LP03430
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 34 |
Well: | 30 |
Vector: | pOT2 |
Associated Gene/Transcript | Gdi-RA |
Protein status: | LP03430.pep: gold |
Preliminary Size: | 824 |
Sequenced Size: | 2338 |
Gene | Date | Evidence |
---|---|---|
CG4079 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4422 | 2002-05-18 | Blastp of sequenced clone |
CG4079 | 2003-01-01 | Sim4 clustering to Release 3 |
Gdi | 2008-04-29 | Release 5.5 accounting |
Gdi | 2008-08-15 | Release 5.9 accounting |
Taf11 | 2008-08-15 | Release 5.9 accounting |
Gdi | 2008-12-18 | 5.12 accounting |
Taf11 | 2008-12-18 | 5.12 accounting |
2338 bp (2338 high quality bases) assembled on 2002-05-18
GenBank Submission: BT003563
> LP03430.complete ATTTTGTTTATTATTCGCTGGTGCTTTTCAAATTTCATTTAAATGGACGA AATCCTCTTTCCCACGCAGCAAAAAAGCAACTCCCTAAGCGACGGCGACG ATGTCGACCTGAAATTCTTCCAGTCGGCCTCCGGCGAGCGGAAGGACAGC GACACCTCGGATCCGGGAAACGATGCGGATCGTGATGGCAAGGATGCGGA TGGGGACAACGACAACAAGAACACGGACGGAGATGGTGACTCTGGCGAGC CGGCGCACAAAAAGCTCAAGACGAAGAAGGAACTGGAGGAGGAGGAGCGC GAACGAATGCAGGTTCTCGTTTCCAACTTTACGGAAGAACAGCTGGATCG CTACGAAATGTATCGTCGCTCTGCCTTTCCCAAGGCCGCCGTCAAGCGTC TAATGCAAACTATCACCGGCTGTTCCGTGTCCCAGAATGTTGTGATAGCC ATGTCCGGCATTGCGAAGGTCTTCGTCGGCGAGGTTGTGGAGGAAGCCCT CGACGTGATGGAGGCCCAAGGTGAATCCGGTGCCCTGCAGCCCAAATTCA TACGAGAGGCAGTGCGACGACTGAGGACCAAGGATCGGATGCCCATAGGC AGATACCAGCAGCCCTATTTCAGACTGAACTAGCGAGTCGAGACATTAAG AAATATAGTTTGTAAGGCTGTTAGTCAATATAAAAATACATAAACAAGTA AAAAGTAAATAAATATAAAGATTTTTTTAACAAAAAAAAAAAAAAAAAAC TCGAGGAAAAGTCCACCAAATCGAACGTCGCAGCAAGTGAAAAGGGCGAA AACCGGATAAAAAAAATATATAAATTACTGTGATTGCAATATATAAATAA GTGCGATCCAATATGAATGAGGAATACGATGCGATTGTGCTAGGAACGGG CCTCAAGGAGTGCATCCTCAGCGGGATGCTGTCCGTGTCCGGCAAGAAGG TTTTGCATATTGATCGAAACAAGTACTACGGCGGCGAGTCCGCCTCGATA ACGCCGCTGGAGGAGCTCTTCCAGCGCTACGGACTGGAGCCGCCCGGCGA ACGATTTGGGCGTGGCCGCGACTGGAACGTGGACCTGATCCCCAAGTTCC TGATGGCCAATGGCCAGCTGGTCAAGCTGCTGATCCACACGGGCGTCACC CGCTATCTGGAGTTCAAGTCCATCGAGGGCAGCTACGTTTACAAGGGCGG CAAGATAGCCAAGGTGCCGGTGGACCAAAAGGAGGCCCTGGCATCCGATC TCATGGGTATGTTCGAGAAGCGTCGCTTCCGGAACTTCCTCATCTACGTG CAGGATTTCCGAGAAGATGACCCCAAGACCTGGAAGGACTTTGACCCCAC CAAGGCCAACATGCAGGGTCTGTACGACAAGTTCGGACTGGACAAGAACA CGCAGGACTTCACCGGCCACGCCCTGGCCCTTTTCCGCGACGATGAGTAT CTGAACGAGCCGGCCGTGAACACCATCCGGCGGATTAAGCTCTACTCCGA TTCGCTGGCGCGTTACGGCAAGTCGCCCTACCTTTATCCCATGTACGGCC TGGGTGAGCTGCCCCAGGGATTCGCACGTCTGTCGGCCATCTACGGCGGC ACCTACATGCTTGACAAGCCCATCGACGAGATTGTCCTCGGCGAGGGCGG CAAGGTGGTGGGAGTGCGCTCCGGCGAAGAGGTCGCCAAGTGCAAGCAGG TCTACTGCGATCCCAGCTACGTGCCCGAGAAGGTGCGCAAGCGTGGCAAG GTGATTCGCTGCATTTGCATTCTGGACCATCCGGTGGCCAGCACCAAGGA TGGTCTCTCCACGCAGATTATCATTCCACAAAAGCAGGTCGGCCGCAAGT CGGACATCTATGTGTCGCTTGTGAGCTCCACTCATCAGGTGGCCGCCAAG GGTTGGTTCGTGGGCATGGTCTCGACCACCGTTGAGACCGAGAACCCGGA GGTGGAGATCAAGCCTGGCTTGGACTTGCTGGAGCCGATCGCACAAAAGT TTGTAACCATTTCGGACTATTTGGAGCCGATCGATGATGGATCCGAGTCT CAAATCTTTATTTCGGAGTCTTACGATGCGACCACGCACTTTGAGACTAC TTGCCTGGATGTGTTGAACATATTCAAGCGGGGCACTGGCGAGACGTTCG ACTTCTCCAAGATCAAGCACGAGTTGGGTGACGAGGAGCAGTAAACGGGA ATGAAGGCCTCATCTGGTTATGGTGCATTTGGACAGCTCAACATCAGCCA CAAACATCGTAGATCGTCTCAGCGTCGTGGCCAAACCTTAAAAAAAAAAA TACCCAAGATAAGAAAACCCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 9490819..9491409 | 2320..1731 | 2845 | 99.2 | Minus |
chr2L | 23010047 | chr2L | 9493085..9493587 | 1258..756 | 2485 | 99.6 | Minus |
chr2L | 23010047 | chr2L | 9491487..9491966 | 1735..1256 | 2355 | 99.4 | Minus |
chr2L | 23010047 | chr2L | 9761260..9761682 | 734..312 | 2115 | 100 | Minus |
chr2L | 23010047 | chr2L | 9761744..9762055 | 312..1 | 1545 | 99.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 9491949..9492547 | 2329..1731 | 2980 | 99.8 | Minus |
2L | 23513712 | 2L | 9494220..9494722 | 1258..756 | 2515 | 100 | Minus |
2L | 23513712 | 2L | 9492625..9493104 | 1735..1256 | 2400 | 100 | Minus |
2L | 23513712 | 2L | 9762421..9762843 | 734..312 | 2115 | 100 | Minus |
2L | 23513712 | 2L | 9762905..9763216 | 312..1 | 1560 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 9491949..9492547 | 2329..1731 | 2980 | 99.8 | Minus |
2L | 23513712 | 2L | 9494220..9494722 | 1258..756 | 2515 | 100 | Minus |
2L | 23513712 | 2L | 9492625..9493104 | 1735..1256 | 2400 | 100 | Minus |
2L | 23513712 | 2L | 9762421..9762843 | 734..312 | 2115 | 100 | Minus |
2L | 23513712 | 2L | 9762905..9763216 | 312..1 | 1560 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 9490819..9491407 | 1733..2320 | 99 | <- | Minus |
chr2L | 9491490..9491965 | 1257..1732 | 99 | <- | Minus |
chr2L | 9493087..9493593 | 750..1256 | 94 | -- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gdi-RA | 1..1332 | 863..2194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gdi-RA | 1..1332 | 863..2194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gdi-RA | 1..1332 | 863..2194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gdi-RA | 1..1332 | 863..2194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gdi-RA | 1..1332 | 863..2194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gdi-RA | 204..1770 | 753..2320 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gdi-RA | 204..1770 | 753..2320 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gdi-RA | 73..1639 | 753..2320 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gdi-RA | 204..1770 | 753..2320 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gdi-RA | 73..1639 | 753..2320 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9491958..9492545 | 1733..2320 | 100 | <- | Minus |
2L | 9492628..9493103 | 1257..1732 | 100 | <- | Minus |
2L | 9494222..9494728 | 750..1256 | 99 | -- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9491958..9492545 | 1733..2320 | 100 | <- | Minus |
2L | 9492628..9493103 | 1257..1732 | 100 | <- | Minus |
2L | 9494222..9494728 | 750..1256 | 99 | -- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9491958..9492545 | 1733..2320 | 100 | <- | Minus |
2L | 9492628..9493103 | 1257..1732 | 100 | <- | Minus |
2L | 9494222..9494728 | 750..1256 | 99 | -- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 9491958..9492545 | 1733..2320 | 100 | <- | Minus |
arm_2L | 9492628..9493103 | 1257..1732 | 100 | <- | Minus |
arm_2L | 9494222..9494728 | 750..1256 | 99 | -- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9491958..9492545 | 1733..2320 | 100 | <- | Minus |
2L | 9492628..9493103 | 1257..1732 | 100 | <- | Minus |
2L | 9494222..9494728 | 750..1256 | 99 | -- | Minus |
Translation from 862 to 2193
> LP03430.pep MNEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLE ELFQRYGLEPPGERFGRGRDWNVDLIPKFLMANGQLVKLLIHTGVTRYLE FKSIEGSYVYKGGKIAKVPVDQKEALASDLMGMFEKRRFRNFLIYVQDFR EDDPKTWKDFDPTKANMQGLYDKFGLDKNTQDFTGHALALFRDDEYLNEP AVNTIRRIKLYSDSLARYGKSPYLYPMYGLGELPQGFARLSAIYGGTYML DKPIDEIVLGEGGKVVGVRSGEEVAKCKQVYCDPSYVPEKVRKRGKVIRC ICILDHPVASTKDGLSTQIIIPQKQVGRKSDIYVSLVSSTHQVAAKGWFV GMVSTTVETENPEVEIKPGLDLLEPIAQKFVTISDYLEPIDDGSESQIFI SESYDATTHFETTCLDVLNIFKRGTGETFDFSKIKHELGDEEQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21994-PA | 443 | GF21994-PA | 1..443 | 1..443 | 2336 | 99.1 | Plus |
Dana\GF11718-PA | 517 | GF11718-PA | 7..409 | 3..373 | 376 | 26 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24025-PA | 443 | GG24025-PA | 1..443 | 1..443 | 2346 | 99.3 | Plus |
Dere\GG21980-PA | 511 | GG21980-PA | 5..396 | 1..366 | 378 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10775-PA | 443 | GH10775-PA | 1..443 | 1..443 | 2285 | 96.4 | Plus |
Dgri\GH23002-PA | 505 | GH23002-PA | 5..316 | 1..294 | 384 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gdi-PC | 443 | CG4422-PC | 1..443 | 1..443 | 2318 | 100 | Plus |
Gdi-PB | 443 | CG4422-PB | 1..443 | 1..443 | 2318 | 100 | Plus |
Gdi-PA | 443 | CG4422-PA | 1..443 | 1..443 | 2318 | 100 | Plus |
Rep-PA | 511 | CG8432-PA | 7..396 | 3..366 | 351 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17638-PA | 443 | GI17638-PA | 1..443 | 1..443 | 2326 | 98.2 | Plus |
Dmoj\GI18968-PA | 517 | GI18968-PA | 5..408 | 1..380 | 348 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25634-PA | 443 | GL25634-PA | 1..443 | 1..443 | 2347 | 99.3 | Plus |
Dper\GL11541-PA | 522 | GL11541-PA | 5..448 | 1..403 | 372 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18172-PA | 443 | GA18172-PA | 1..443 | 1..443 | 2347 | 99.3 | Plus |
Dpse\GA21074-PA | 522 | GA21074-PA | 5..448 | 1..403 | 371 | 24.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12441-PA | 443 | GM12441-PA | 1..443 | 1..443 | 2350 | 99.8 | Plus |
Dsec\GM21968-PA | 513 | GM21968-PA | 5..314 | 1..288 | 370 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22354-PA | 443 | GD22354-PA | 1..443 | 1..443 | 2350 | 99.8 | Plus |
Dsim\GD11461-PA | 511 | GD11461-PA | 5..314 | 1..288 | 369 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18203-PA | 443 | GJ18203-PA | 1..443 | 1..443 | 2322 | 98 | Plus |
Dvir\GJ20912-PA | 508 | GJ20912-PA | 5..402 | 1..382 | 362 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24240-PA | 443 | GK24240-PA | 1..443 | 1..443 | 2317 | 98 | Plus |
Dwil\GK15875-PA | 512 | GK15875-PA | 5..401 | 1..368 | 398 | 26.1 | Plus |
Dwil\GK24043-PA | 412 | GK24043-PA | 7..334 | 3..368 | 208 | 24.3 | Plus |
Translation from 862 to 2193
> LP03430.hyp MNEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLE ELFQRYGLEPPGERFGRGRDWNVDLIPKFLMANGQLVKLLIHTGVTRYLE FKSIEGSYVYKGGKIAKVPVDQKEALASDLMGMFEKRRFRNFLIYVQDFR EDDPKTWKDFDPTKANMQGLYDKFGLDKNTQDFTGHALALFRDDEYLNEP AVNTIRRIKLYSDSLARYGKSPYLYPMYGLGELPQGFARLSAIYGGTYML DKPIDEIVLGEGGKVVGVRSGEEVAKCKQVYCDPSYVPEKVRKRGKVIRC ICILDHPVASTKDGLSTQIIIPQKQVGRKSDIYVSLVSSTHQVAAKGWFV GMVSTTVETENPEVEIKPGLDLLEPIAQKFVTISDYLEPIDDGSESQIFI SESYDATTHFETTCLDVLNIFKRGTGETFDFSKIKHELGDEEQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gdi-PC | 443 | CG4422-PC | 1..443 | 1..443 | 2318 | 100 | Plus |
Gdi-PB | 443 | CG4422-PB | 1..443 | 1..443 | 2318 | 100 | Plus |
Gdi-PA | 443 | CG4422-PA | 1..443 | 1..443 | 2318 | 100 | Plus |
Rep-PA | 511 | CG8432-PA | 7..396 | 3..366 | 351 | 26.1 | Plus |