BDGP Sequence Production Resources |
Search the DGRC for LP04135
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 41 |
Well: | 35 |
Vector: | pOT2 |
Associated Gene/Transcript | CG2906-RE |
Protein status: | LP04135.pep: gold |
Preliminary Size: | 1027 |
Sequenced Size: | 1503 |
Gene | Date | Evidence |
---|---|---|
CG2906 | 2002-01-01 | Sim4 clustering to Release 2 |
CG2906 | 2008-04-29 | Release 5.5 accounting |
CG2906 | 2008-04-29 | Picked prior to 5.5 |
CG2906 | 2008-08-15 | Release 5.9 accounting |
CG2906 | 2008-12-18 | 5.12 accounting |
1503 bp assembled on 2007-11-15
GenBank Submission: BT031275
> LP04135.complete GACTTCTTCATAGACGATCATTGGAGTAAACTTCCAGGGAATTGGCAAAA GCACTTAGAAAGCATTCCTCTGGAGAACCTTGGAGATTTGCTCAAAAATG AGAATCATAATACCCAGCTGACATGGCCATTGGATCTGAAGAACCTGCAA GAGGAGCTTAGGAAACTCTGCGTCAGCCGTGTACCAAAGCACCCGCCTGA TGTTGAACTCCCTTCCTTGCTCACTTCTTGATCACCCCAAGCTAAAATAC GTGTTCCTAAAGCGGGTTAAGCCAAAGAAGCACCATGAAATCATTCGAAT GGCCGAAATCTGTGCCCTGAGTCAACAAAAAACTCCTGTGGACTTTATTG TCGACTTTGGGGCTGGTGTCGGTCACCTAGCACGTGTTTTGGGCTACGGG TATGGACTACGAGTGTGCTGCTATGAGATGCAACCCGATCTCAATCAGCA AGCAAGGGAAATTGATTTAAAGCTGGAGTCCATGGCAGCAAAACACCTAT CAGAGGATGAAACCACACACTTTCAGCGACCAGTACACCTTACACATCGC TTGGAGAGCAGCACTAAGCCAGAGCAGTTCCTATCCAGCATTCGGCAGGC CCTGCAGCTAACAGACGACAATTTCCGATTTGGTGTGATAGGCCTGCATC CCTGTGGCAATCTGGGCCCGACACTGATGCGCATGTTTCTCGGCTGCCCG CAGGCCAAGTTCCTCAATTTTGTGGGCTGTTGCTACCAGAAGATGACTAC CCAGTCCACCCATCCCAGGGAGCATGTCCATGGGTACCCGTTGAGCAGTG AACTCAAAGATAAAAACGAATGCCAACTCAGCTACGAGGCCCGTGAGATC TCCTGTCACGCTATGGAGGTGTATCACGATCGTCTGAGGATGGGGGATTA CCAACATCTCCGCATACACTCCCTAAGAGCCGCCGCCGAGCGAATAATAG TGCATCAGTTTCCAGAGCTTCGCCACTGTGCCCTGCGAAATGTAAAGTAC TCACCCGGCATGACGTTTCACCAATATTTCCAGAAAGCCGTACAGGGTAC TCGCTTTGAAGCACTGGACAGCCGAACTCTAAGTAACCAGCAGACGGAAA CAGATTTGGCCAACTGGCAACGGATAGTCTCATTCTACACACTTCGATTA ATGATGGCTCCGCTGGTGGAGAGCATTATTCTTTACGATCGCTGCCTGTT TCTAATGGAAAATGATTGTCAAGTACAGATAGAGGCCATATTCGATCCTC GGCTCTCGCCTAGAAACCACATCACCAGGGCCGTTAAACCGTAATTTTAC TGGGGTAGAATTACCCTAATCTGACCATATATCACGCACAAGCGACATAC CCGCCTGATCCTTATCGTTTAATGCTATAAAGTGTAACCACAACATTGCC TTTCGCGTTTACGTGTGTTTATTTTTAAAAAGATAAAGTAATATATCGTT GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 3844289..3845107 | 205..1023 | 4095 | 100 | Plus |
chr2R | 21145070 | chr2R | 3845409..3845646 | 1214..1451 | 1190 | 100 | Plus |
chr2R | 21145070 | chr2R | 3844028..3844232 | 1..205 | 1025 | 100 | Plus |
chr2R | 21145070 | chr2R | 3845161..3845351 | 1024..1214 | 955 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 7956897..7957715 | 205..1023 | 4095 | 100 | Plus |
2R | 25286936 | 2R | 7958017..7958256 | 1214..1453 | 1200 | 100 | Plus |
2R | 25286936 | 2R | 7956636..7956840 | 1..205 | 1025 | 100 | Plus |
2R | 25286936 | 2R | 7957769..7957959 | 1024..1214 | 955 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 7958096..7958914 | 205..1023 | 4095 | 100 | Plus |
2R | 25260384 | 2R | 7959216..7959455 | 1214..1453 | 1200 | 100 | Plus |
2R | 25260384 | 2R | 7957835..7958039 | 1..205 | 1025 | 100 | Plus |
2R | 25260384 | 2R | 7958968..7959158 | 1024..1214 | 955 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 3845410..3845646 | 1215..1451 | 100 | Plus | |
chr2R | 3844028..3844232 | 1..205 | 100 | -> | Plus |
chr2R | 3844290..3845107 | 206..1023 | 100 | -> | Plus |
chr2R | 3845161..3845351 | 1024..1214 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2906-RD | 82..1371 | 1..1294 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2906-RD | 82..1371 | 1..1294 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2906-RD | 82..1371 | 1..1294 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2906-RD | 82..1371 | 1..1294 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2906-RD | 82..1371 | 1..1294 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2906-RD | 82..1528 | 1..1451 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2906-RE | 141..1591 | 1..1451 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2906-RE | 141..1591 | 1..1451 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2906-RD | 82..1528 | 1..1451 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2906-RE | 141..1591 | 1..1451 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7956636..7956840 | 1..205 | 100 | -> | Plus |
2R | 7956898..7957715 | 206..1023 | 100 | -> | Plus |
2R | 7957769..7957959 | 1024..1214 | 100 | -> | Plus |
2R | 7958018..7958254 | 1215..1451 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7956636..7956840 | 1..205 | 100 | -> | Plus |
2R | 7956898..7957715 | 206..1023 | 100 | -> | Plus |
2R | 7957769..7957959 | 1024..1214 | 100 | -> | Plus |
2R | 7958018..7958254 | 1215..1451 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7956636..7956840 | 1..205 | 100 | -> | Plus |
2R | 7956898..7957715 | 206..1023 | 100 | -> | Plus |
2R | 7957769..7957959 | 1024..1214 | 100 | -> | Plus |
2R | 7958018..7958254 | 1215..1451 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 3844141..3844345 | 1..205 | 100 | -> | Plus |
arm_2R | 3844403..3845220 | 206..1023 | 100 | -> | Plus |
arm_2R | 3845274..3845464 | 1024..1214 | 100 | -> | Plus |
arm_2R | 3845523..3845759 | 1215..1451 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7958097..7958914 | 206..1023 | 100 | -> | Plus |
2R | 7958968..7959158 | 1024..1214 | 100 | -> | Plus |
2R | 7959217..7959453 | 1215..1451 | 100 | Plus | |
2R | 7957835..7958039 | 1..205 | 100 | -> | Plus |
Translation from 199 to 1293
> LP04135.hyp MLNSLPCSLLDHPKLKYVFLKRVKPKKHHEIIRMAEICALSQQKTPVDFI VDFGAGVGHLARVLGYGYGLRVCCYEMQPDLNQQAREIDLKLESMAAKHL SEDETTHFQRPVHLTHRLESSTKPEQFLSSIRQALQLTDDNFRFGVIGLH PCGNLGPTLMRMFLGCPQAKFLNFVGCCYQKMTTQSTHPREHVHGYPLSS ELKDKNECQLSYEAREISCHAMEVYHDRLRMGDYQHLRIHSLRAAAERII VHQFPELRHCALRNVKYSPGMTFHQYFQKAVQGTRFEALDSRTLSNQQTE TDLANWQRIVSFYTLRLMMAPLVESIILYDRCLFLMENDCQVQIEAIFDP RLSPRNHITRAVKP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2906-PE | 364 | CG2906-PE | 1..364 | 1..364 | 1940 | 100 | Plus |
CG2906-PD | 456 | CG2906-PD | 95..456 | 3..364 | 1931 | 100 | Plus |
CG33964-PA | 494 | CG33964-PA | 122..489 | 26..363 | 212 | 25.9 | Plus |
Translation from 199 to 1293
> LP04135.pep MLNSLPCSLLDHPKLKYVFLKRVKPKKHHEIIRMAEICALSQQKTPVDFI VDFGAGVGHLARVLGYGYGLRVCCYEMQPDLNQQAREIDLKLESMAAKHL SEDETTHFQRPVHLTHRLESSTKPEQFLSSIRQALQLTDDNFRFGVIGLH PCGNLGPTLMRMFLGCPQAKFLNFVGCCYQKMTTQSTHPREHVHGYPLSS ELKDKNECQLSYEAREISCHAMEVYHDRLRMGDYQHLRIHSLRAAAERII VHQFPELRHCALRNVKYSPGMTFHQYFQKAVQGTRFEALDSRTLSNQQTE TDLANWQRIVSFYTLRLMMAPLVESIILYDRCLFLMENDCQVQIEAIFDP RLSPRNHITRAVKP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13650-PA | 444 | GF13650-PA | 80..441 | 3..364 | 1614 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23319-PA | 465 | GG23319-PA | 95..430 | 3..338 | 1674 | 92 | Plus |
Dere\GG20255-PA | 492 | GG20255-PA | 119..490 | 23..364 | 184 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20605-PA | 462 | GH20605-PA | 100..461 | 4..363 | 1278 | 65.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2906-PE | 364 | CG2906-PE | 1..364 | 1..364 | 1940 | 100 | Plus |
CG2906-PD | 456 | CG2906-PD | 95..456 | 3..364 | 1931 | 100 | Plus |
CG33964-PA | 494 | CG33964-PA | 122..489 | 26..363 | 212 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20447-PA | 454 | GI20447-PA | 69..435 | 4..359 | 1246 | 64.8 | Plus |
Dmoj\GI20589-PA | 495 | GI20589-PA | 151..493 | 49..363 | 165 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11477-PA | 470 | GL11477-PA | 100..458 | 4..363 | 1428 | 72.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15509-PA | 470 | GA15509-PA | 100..458 | 4..363 | 1418 | 71.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20996-PA | 456 | GM20996-PA | 95..456 | 3..364 | 1894 | 96.7 | Plus |
Dsec\GM21342-PA | 494 | GM21342-PA | 119..490 | 23..364 | 168 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10527-PA | 456 | GD10527-PA | 95..456 | 3..364 | 1900 | 97 | Plus |
Dsim\GD10526-PA | 367 | GD10526-PA | 95..367 | 3..275 | 1431 | 96.7 | Plus |
Dsim\GD15405-PA | 494 | GD15405-PA | 119..490 | 23..364 | 166 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20117-PA | 436 | GJ20117-PA | 102..432 | 6..338 | 1265 | 69.1 | Plus |
Dvir\GJ20770-PA | 493 | GJ20770-PA | 104..493 | 5..364 | 220 | 25.1 | Plus |
Dvir\GJ20414-PA | 474 | GJ20414-PA | 106..473 | 21..363 | 167 | 24.8 | Plus |