BDGP Sequence Production Resources |
Search the DGRC for LP04141
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 41 |
Well: | 41 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6488-RA |
Protein status: | LP04141.pep: gold |
Sequenced Size: | 1860 |
Gene | Date | Evidence |
---|---|---|
CG6488 | 2008-04-29 | Release 5.5 accounting |
CG6488 | 2008-04-29 | Picked prior to 5.5 |
CG6488 | 2008-08-15 | Release 5.9 accounting |
CG6488 | 2008-12-18 | 5.12 accounting |
1860 bp assembled on 2007-12-03
GenBank Submission: BT031276
> LP04141.complete ATTGGATAATTTTTGATTTATAATTGAAAACAATGGACTTTCCGGACAAA ATGGATTTGGAGAACGAGAGGGTACTGAAGCTGATATTCCCCGACGGTGT GCCAGACAATCTGCGTGGCAATCCGGAGCTGGATAACTACCTCGCCAAAC TGGGTACCTGCAAGGTGGAGCAGCTGAAGAAGGAGCAGACGCGACTGGCG GAAGAGGCGCGCACCATTCTGGAGCAGACACAGGATCTGGCCATCTCCAA CTACAGAACTTTCATCACCACCGCGGAGAACTCGCGTTCGATTTTCAGCG AGTTCCTGCGATCGGAGCAGCAGCTGGACACACTGGTGTCCAAGCTTCCC GACCTCAGTGTCCAGTGCGAACGCTTCCTGCAGGACTCCGCCGAGCTGAA TGAGCAACGGCGACTGAATTCCATTACCCTGCAAAAGAACGCCCAGTTGC TGGAAGTTCTCGAACTGCCGCAACTCATGGAGCGCTGTATTCGCGAGGGC CGCTACGAGGAGGCTCTGGAACTGGCCGCCTACGCCACCCGCTTGGGCCA GCACCAGGGACACATTCCCGTGGTCACAAGCATTGTGCGCTCCGTGGAAG CCCTGTGGCACAACATGCTGGTGCAGCTGGTTGCACAACTGCGGACGGAT CTCCAGCTACCCAAGTGCCTGCAAATCGTGGGCTATCTTCGACGGATGCA GGCATTCGGTGACAACGAACTGCGATTGAAGTTTCTGCAGGCAAGGGACG CGTGGTTAACTTCTTGCCTGGAGGCCATACCCACTGCAGATGCCCAGCAG CATCTATCGAAAACCATCGAGATTACTCGCATAAATCTGTTCAATATAAT CACCCAGTATCGCGCAATTTTCCCGGAAGACGAGGGCACTCTAAAGACTC AGAGTTCTTTAAGACCGCTGCAGGGCGTCAGCTGCAACGGTGACAGACTT TTTCAGGCCTGGCTGCACAATAAGATCAGCGACTTTCTGCAGACTCTGGA ACGTGATCTACAGCTAGGAGTTGGCTCCGTCGAAACAGTGCTTGGGCAGT GCATGTACTTTGGGCTGTCGTTTAGCCGTGTCGGCGCTGATTTTCGTGCC CTTATGGCTCCAATTTTCGTGGGCGTGATCCGCCGTCGCTTTGAGAGCAG CGTGGAACAGGTCGACGAGCAGTTCGAGCGGGAACTGGAGAGATTCACCT TGATCAACAAGGTGGCGCTGCACTCTCACGCCCGCAAGCAGGTTGATCCC GAGCAGGAGTCCTACGCGCCGCCCGAAGCTCTATTGGATTTCTATCCCCT GGCCGCTTTGTGCAATGGCTATCTGAGCGCGTTGAACGAGCTGCGTCTGT GTGCTCCCTTGGCCTTGGCCACCGATGTTACCCGCTGTCTGCAGCACTCC CTGCAACAGGCTGCTCAGCGTGTGCTTGCCTTTTATCGGCAAGAGCAGCA GGCCTTCGCCGGCAGCGAACGAGAGGCATTTGTTCGGCTCTGCTCATGTC TGGCCTACGACCTGGTACCCTATATTCAGAGGTGCATCCATGGAGTCTTC CCCCCGCAGTCGCTAACCGTTCACTTGGGCATTAGCTTGCTTCAGCTGGA GCAACAGCAGCTCACCTACTTGCAGCAGACTCGCATTCTTGAGCCCTTGA AGCACTTACTGCCGACCAAGGCACTGGTGCAGCCCCAGGATAAAGTGATG GAGGCTAAGCCAAGCGCTGGGGTGCCTGTCACTGCCGAGGGATAAAGCAG TCCAACGCAATATTAGTTGTTAAATATATTCCAATATTTATAAATATACC TACCCTTAAAGGCATAAAGTTTAATTATACTATAAACTTTTGAAAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6488-RA | 2059 | CG6488-RA | 206..2052 | 1..1847 | 9235 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 11495527..11496396 | 1842..973 | 4275 | 99.4 | Minus |
chr2L | 23010047 | chr2L | 11496990..11497465 | 578..103 | 2380 | 100 | Minus |
chr2L | 23010047 | chr2L | 11496718..11496931 | 792..579 | 980 | 97.2 | Minus |
chr2L | 23010047 | chr2L | 11496453..11496635 | 974..792 | 885 | 98.9 | Minus |
chr2L | 23010047 | chr2L | 11497533..11497637 | 105..1 | 480 | 97.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 11496799..11497673 | 1847..973 | 4375 | 100 | Minus |
2L | 23513712 | 2L | 11498267..11498742 | 578..103 | 2380 | 100 | Minus |
2L | 23513712 | 2L | 11497995..11498208 | 792..579 | 1070 | 100 | Minus |
2L | 23513712 | 2L | 11497730..11497912 | 974..792 | 915 | 100 | Minus |
2L | 23513712 | 2L | 11498810..11498914 | 105..1 | 525 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 11496799..11497673 | 1847..973 | 4375 | 100 | Minus |
2L | 23513712 | 2L | 11498267..11498742 | 578..103 | 2380 | 100 | Minus |
2L | 23513712 | 2L | 11497995..11498208 | 792..579 | 1070 | 100 | Minus |
2L | 23513712 | 2L | 11497730..11497912 | 974..792 | 915 | 100 | Minus |
2L | 23513712 | 2L | 11498810..11498914 | 105..1 | 525 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy5 | 7369 | gypsy5 GYPSY5 7369bp | 6165..6242 | 1759..1836 | 128 | 65.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 11495527..11496394 | 975..1842 | 99 | <- | Minus |
chr2L | 11496453..11496634 | 793..974 | 98 | <- | Minus |
chr2L | 11496718..11496931 | 579..792 | 97 | <- | Minus |
chr2L | 11496990..11497462 | 106..578 | 100 | <- | Minus |
chr2L | 11497533..11497637 | 1..105 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6488-RA | 1..1713 | 33..1745 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6488-RA | 1..1713 | 33..1745 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6488-RA | 1..1713 | 33..1745 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6488-RA | 1..1713 | 33..1745 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6488-RA | 1..1713 | 33..1745 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6488-RA | 206..2047 | 1..1842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6488-RA | 206..2047 | 1..1842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6488-RA | 35..1876 | 1..1842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6488-RA | 206..2047 | 1..1842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6488-RA | 35..1876 | 1..1842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11496804..11497671 | 975..1842 | 100 | <- | Minus |
2L | 11497730..11497911 | 793..974 | 100 | <- | Minus |
2L | 11497995..11498208 | 579..792 | 100 | <- | Minus |
2L | 11498267..11498739 | 106..578 | 100 | <- | Minus |
2L | 11498810..11498914 | 1..105 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11496804..11497671 | 975..1842 | 100 | <- | Minus |
2L | 11497730..11497911 | 793..974 | 100 | <- | Minus |
2L | 11497995..11498208 | 579..792 | 100 | <- | Minus |
2L | 11498267..11498739 | 106..578 | 100 | <- | Minus |
2L | 11498810..11498914 | 1..105 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11496804..11497671 | 975..1842 | 100 | <- | Minus |
2L | 11497730..11497911 | 793..974 | 100 | <- | Minus |
2L | 11497995..11498208 | 579..792 | 100 | <- | Minus |
2L | 11498267..11498739 | 106..578 | 100 | <- | Minus |
2L | 11498810..11498914 | 1..105 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 11497995..11498208 | 579..792 | 100 | <- | Minus |
arm_2L | 11496804..11497671 | 975..1842 | 100 | <- | Minus |
arm_2L | 11497730..11497911 | 793..974 | 100 | <- | Minus |
arm_2L | 11498267..11498739 | 106..578 | 100 | <- | Minus |
arm_2L | 11498810..11498914 | 1..105 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11496804..11497671 | 975..1842 | 100 | <- | Minus |
2L | 11497730..11497911 | 793..974 | 100 | <- | Minus |
2L | 11497995..11498208 | 579..792 | 100 | <- | Minus |
2L | 11498267..11498739 | 106..578 | 100 | <- | Minus |
2L | 11498810..11498914 | 1..105 | 100 | Minus |
Translation from 32 to 1744
> LP04141.hyp MDFPDKMDLENERVLKLIFPDGVPDNLRGNPELDNYLAKLGTCKVEQLKK EQTRLAEEARTILEQTQDLAISNYRTFITTAENSRSIFSEFLRSEQQLDT LVSKLPDLSVQCERFLQDSAELNEQRRLNSITLQKNAQLLEVLELPQLME RCIREGRYEEALELAAYATRLGQHQGHIPVVTSIVRSVEALWHNMLVQLV AQLRTDLQLPKCLQIVGYLRRMQAFGDNELRLKFLQARDAWLTSCLEAIP TADAQQHLSKTIEITRINLFNIITQYRAIFPEDEGTLKTQSSLRPLQGVS CNGDRLFQAWLHNKISDFLQTLERDLQLGVGSVETVLGQCMYFGLSFSRV GADFRALMAPIFVGVIRRRFESSVEQVDEQFERELERFTLINKVALHSHA RKQVDPEQESYAPPEALLDFYPLAALCNGYLSALNELRLCAPLALATDVT RCLQHSLQQAAQRVLAFYRQEQQAFAGSEREAFVRLCSCLAYDLVPYIQR CIHGVFPPQSLTVHLGISLLQLEQQQLTYLQQTRILEPLKHLLPTKALVQ PQDKVMEAKPSAGVPVTAEG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6488-PA | 570 | CG6488-PA | 1..570 | 1..570 | 2900 | 100 | Plus |
Translation from 32 to 1744
> LP04141.pep MDFPDKMDLENERVLKLIFPDGVPDNLRGNPELDNYLAKLGTCKVEQLKK EQTRLAEEARTILEQTQDLAISNYRTFITTAENSRSIFSEFLRSEQQLDT LVSKLPDLSVQCERFLQDSAELNEQRRLNSITLQKNAQLLEVLELPQLME RCIREGRYEEALELAAYATRLGQHQGHIPVVTSIVRSVEALWHNMLVQLV AQLRTDLQLPKCLQIVGYLRRMQAFGDNELRLKFLQARDAWLTSCLEAIP TADAQQHLSKTIEITRINLFNIITQYRAIFPEDEGTLKTQSSLRPLQGVS CNGDRLFQAWLHNKISDFLQTLERDLQLGVGSVETVLGQCMYFGLSFSRV GADFRALMAPIFVGVIRRRFESSVEQVDEQFERELERFTLINKVALHSHA RKQVDPEQESYAPPEALLDFYPLAALCNGYLSALNELRLCAPLALATDVT RCLQHSLQQAAQRVLAFYRQEQQAFAGSEREAFVRLCSCLAYDLVPYIQR CIHGVFPPQSLTVHLGISLLQLEQQQLTYLQQTRILEPLKHLLPTKALVQ PQDKVMEAKPSAGVPVTAEG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15121-PA | 576 | GF15121-PA | 1..576 | 1..570 | 2565 | 87.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10309-PA | 570 | GG10309-PA | 1..570 | 1..570 | 2935 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13522-PA | 570 | GH13522-PA | 1..570 | 7..570 | 2309 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6488-PA | 570 | CG6488-PA | 1..570 | 1..570 | 2900 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18138-PA | 573 | GI18138-PA | 1..573 | 1..570 | 2293 | 76.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18564-PA | 572 | GL18564-PA | 1..572 | 7..570 | 2461 | 83.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19631-PA | 572 | GA19631-PA | 1..572 | 7..570 | 2461 | 83.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11064-PA | 570 | GM11064-PA | 1..570 | 1..570 | 2966 | 98.4 | Plus |
Dsec\GM19683-PA | 218 | GM19683-PA | 3..218 | 25..240 | 1100 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22172-PA | 570 | GD22172-PA | 1..570 | 1..570 | 2978 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14899-PA | 574 | GJ14899-PA | 1..556 | 1..550 | 2318 | 77.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23209-PA | 566 | GK23209-PA | 1..566 | 7..570 | 2338 | 77.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12861-PA | 570 | GE12861-PA | 1..570 | 1..570 | 2950 | 97.7 | Plus |