BDGP Sequence Production Resources |
Search the DGRC for LP04163
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 41 |
Well: | 63 |
Vector: | pOT2 |
Associated Gene/Transcript | sgll-RA |
Protein status: | LP04163.pep: gold |
Preliminary Size: | 1587 |
Sequenced Size: | 1251 |
Gene | Date | Evidence |
---|---|---|
CG2649 | 2002-01-01 | Sim4 clustering to Release 2 |
CG31472 | 2002-05-18 | Blastp of sequenced clone |
CG31472 | 2008-04-29 | Release 5.5 accounting |
CG31472 | 2008-08-15 | Release 5.9 accounting |
CG31472 | 2008-12-18 | 5.12 accounting |
1251 bp (1251 high quality bases) assembled on 2002-05-18
GenBank Submission: AY119015
> LP04163.complete ACTAAGCGCAAACAAGTCTTGCATTTTGCAATAAATTCTCTAACCGGTTT TGTTATTGTTTTGGTGCTCAAGTACCGCAGAAAAGCTCATATCTGACCTT GAATAATGAAGTTGCTGCAAACAATTCGAAGGATGAGCCAAGGTGCCTCG GAGGTGCCACTTTCGGCACTTCGTCTGAAGTACTGTGAGCGCAAGGACGC CTTCCTGGAGGATAACATCAAGGTGAAGAATCCCTTCTGTGTATTCCGAG ACTGGCTGGAGTTGGCGCTGAAAACCCCGGAGATCTTGGAGCCCAATGCC GCCGCCCTGGCTACCGTGAGTGCGGAGGGTAGGCCTTCCAATCGCTATGT GCTGGTTAAAGAAGCCACCGCCGAGGGATTCACCTTCTTCACGAACTACG GTAGCCGCAAGGCTGAGGACATCAAGTCCAATCCCTATGTAGCCATATCC TTCTACTGGCTCCCTTTGCGGCGAAGTGTCCGCATCGAGGGCGTGGCTGA GAAGATCTCGGTGGAAGACTCCCTCAAGTACTTCCACCAGCGACCAAGAG CCAGCCAAATCGGAGCCGCTGCCAGTCCGCAGAGCCAGCGGATTCCGTCG CGCAGCTACTTGGACGACGTGGAGGCGGCAATTAAGCTAGAACTGGGTCC CGATGGCGAGGTGCCGCTGCCCAACTGGGGTGGCTACTTGGTGCGTCCCG ACCTCATTGAGTTCTGGCAGGGTCAGACCGATCGGCTCCACGATCGCATC CGCTTTAGACGAGGTGGAGGAGTAGAATCCGAAGTCGACAGCAAACTGGT TCACAAAGGAGAGGATGGTTGGGTGTACGAACGGCTGGCTCCTTAGGCAC TGGGTTCTGGAGTTCAGCTACAGATGCATTGAAAATGTCTTCCAAATTAA GTTGTTATGCGCAGGATAATAGAGGAACGTTTAAAGCTGCTTCAAAATAA ATGTTAAGACATAACCAACAACTATGTACATCTGTACAAGCTTAACTACC AAATACAAATTTAAGATTGCCTTTAAATATTGTCATAAGGTGTAAGTGAA ATTACAATTCCTTTTTAAATTTGAAAGTACACTAGCTAAGATCACATCCT AAAATATGGCTTATAGCCCTTAAAAAAGTTGGACAAGTAGCCTAAGCATT TTTTATCCGTTGCCTTGAAGTGCGTTATAAATTGTAGAGCATATTAAAAA TTACTATGTCGACTGTTTTGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31472-RA | 1222 | CG31472-RA | 1..1222 | 1..1222 | 6110 | 100 | Plus |
CG31472-RB | 1288 | CG31472-RB | 173..1288 | 107..1222 | 5580 | 100 | Plus |
CG31473-RA | 1027 | CG31473-RA | 1..151 | 1078..1228 | 740 | 99.3 | Plus |
CG31472-RB | 1288 | CG31472-RB | 6..111 | 1..106 | 530 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 3636907..3637963 | 166..1222 | 5225 | 99.6 | Plus |
chr3R | 27901430 | chr3R | 3636614..3636719 | 1..106 | 530 | 100 | Plus |
chr3R | 27901430 | chr3R | 3636781..3636840 | 107..166 | 300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 3636614..3636719 | 1..106 | 100 | -> | Plus |
chr3R | 3636781..3636840 | 107..166 | 100 | -> | Plus |
chr3R | 3636908..3637963 | 167..1222 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31472-RA | 1..741 | 106..846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31472-RA | 1..741 | 106..846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31472-RA | 1..741 | 106..846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31472-RA | 1..741 | 106..846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sgll-RA | 1..741 | 106..846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31472-RA | 1..1222 | 1..1222 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31472-RA | 1..1222 | 1..1222 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31472-RA | 1..1222 | 1..1222 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31472-RA | 1..1222 | 1..1222 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sgll-RA | 32..1253 | 1..1222 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7810563..7810668 | 1..106 | 100 | -> | Plus |
3R | 7810730..7810789 | 107..166 | 100 | -> | Plus |
3R | 7810857..7811912 | 167..1222 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7810563..7810668 | 1..106 | 100 | -> | Plus |
3R | 7810730..7810789 | 107..166 | 100 | -> | Plus |
3R | 7810857..7811912 | 167..1222 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7810563..7810668 | 1..106 | 100 | -> | Plus |
3R | 7810730..7810789 | 107..166 | 100 | -> | Plus |
3R | 7810857..7811912 | 167..1222 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 3636285..3636390 | 1..106 | 100 | -> | Plus |
arm_3R | 3636452..3636511 | 107..166 | 100 | -> | Plus |
arm_3R | 3636579..3637634 | 167..1222 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7551688..7552743 | 167..1222 | 100 | Plus | |
3R | 7551394..7551499 | 1..106 | 100 | -> | Plus |
3R | 7551561..7551620 | 107..166 | 100 | -> | Plus |
Translation from 105 to 845
> LP04163.hyp MKLLQTIRRMSQGASEVPLSALRLKYCERKDAFLEDNIKVKNPFCVFRDW LELALKTPEILEPNAAALATVSAEGRPSNRYVLVKEATAEGFTFFTNYGS RKAEDIKSNPYVAISFYWLPLRRSVRIEGVAEKISVEDSLKYFHQRPRAS QIGAAASPQSQRIPSRSYLDDVEAAIKLELGPDGEVPLPNWGGYLVRPDL IEFWQGQTDRLHDRIRFRRGGGVESEVDSKLVHKGEDGWVYERLAP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sgll-PA | 246 | CG31472-PA | 1..246 | 1..246 | 1279 | 100 | Plus |
sgll-PB | 237 | CG31472-PB | 1..237 | 10..246 | 1237 | 100 | Plus |
CG31473-PA | 257 | CG31473-PA | 39..252 | 35..242 | 289 | 33.6 | Plus |
Translation from 105 to 845
> LP04163.pep MKLLQTIRRMSQGASEVPLSALRLKYCERKDAFLEDNIKVKNPFCVFRDW LELALKTPEILEPNAAALATVSAEGRPSNRYVLVKEATAEGFTFFTNYGS RKAEDIKSNPYVAISFYWLPLRRSVRIEGVAEKISVEDSLKYFHQRPRAS QIGAAASPQSQRIPSRSYLDDVEAAIKLELGPDGEVPLPNWGGYLVRPDL IEFWQGQTDRLHDRIRFRRGGGVESEVDSKLVHKGEDGWVYERLAP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16863-PA | 237 | GF16863-PA | 1..237 | 10..246 | 1110 | 87.3 | Plus |
Dana\GF16862-PA | 232 | GF16862-PA | 1..232 | 10..246 | 882 | 70.9 | Plus |
Dana\GF18174-PA | 260 | GF18174-PA | 49..256 | 40..242 | 285 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14208-PA | 237 | GG14208-PA | 1..237 | 10..246 | 1208 | 96.2 | Plus |
Dere\GG14219-PA | 257 | GG14219-PA | 39..252 | 35..242 | 290 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18971-PA | 238 | GH18971-PA | 1..238 | 10..246 | 953 | 77.7 | Plus |
Dgri\GH18972-PA | 221 | GH18972-PA | 9..214 | 40..242 | 308 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sgll-PA | 246 | CG31472-PA | 1..246 | 1..246 | 1279 | 100 | Plus |
sgll-PB | 237 | CG31472-PB | 1..237 | 10..246 | 1237 | 100 | Plus |
CG31473-PA | 257 | CG31473-PA | 39..252 | 35..242 | 289 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24131-PA | 237 | GI24131-PA | 1..237 | 10..246 | 995 | 80.6 | Plus |
Dmoj\GI24132-PA | 260 | GI24132-PA | 47..254 | 35..242 | 275 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12458-PA | 237 | GL12458-PA | 1..237 | 10..246 | 1069 | 83.1 | Plus |
Dper\GL12459-PA | 260 | GL12459-PA | 40..253 | 35..242 | 326 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27512-PA | 237 | GA27512-PA | 1..237 | 10..246 | 1071 | 83.1 | Plus |
Dpse\GA16274-PA | 260 | GA16274-PA | 40..253 | 35..242 | 326 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10975-PA | 237 | GM10975-PA | 1..237 | 10..246 | 1227 | 98.3 | Plus |
Dsec\GM10976-PA | 257 | GM10976-PA | 39..252 | 35..242 | 294 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19951-PA | 237 | GD19951-PA | 1..237 | 10..246 | 1230 | 98.3 | Plus |
Dsim\GD19952-PA | 257 | GD19952-PA | 39..252 | 35..242 | 293 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10954-PA | 237 | GJ10954-PA | 1..237 | 10..246 | 1037 | 81.9 | Plus |
Dvir\GJ10955-PA | 237 | GJ10955-PA | 22..227 | 37..242 | 252 | 30.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12024-PA | 237 | GK12024-PA | 1..237 | 10..246 | 1073 | 84.4 | Plus |
Dwil\GK12025-PA | 263 | GK12025-PA | 40..257 | 34..242 | 323 | 33 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11187-PA | 237 | GE11187-PA | 1..237 | 10..246 | 1198 | 95.4 | Plus |
Dyak\GE24943-PA | 237 | GE24943-PA | 1..237 | 10..246 | 1190 | 95.4 | Plus |
Dyak\GE11188-PA | 257 | GE11188-PA | 39..252 | 35..242 | 288 | 33.2 | Plus |