BDGP Sequence Production Resources |
Search the DGRC for LP04475
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 44 |
Well: | 75 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8031-RA |
Protein status: | LP04475.pep: gold |
Preliminary Size: | 1316 |
Sequenced Size: | 1282 |
Gene | Date | Evidence |
---|---|---|
CG8031 | 2001-01-01 | Release 2 assignment |
CG8031 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8031 | 2003-08-11 | Blastp of sequenced clone |
CG8031 | 2008-04-29 | Release 5.5 accounting |
CG8031 | 2008-08-15 | Release 5.9 accounting |
CG8031 | 2008-12-18 | 5.12 accounting |
1282 bp (1282 high quality bases) assembled on 2003-08-11
GenBank Submission: AY061544
> LP04475.complete CTCGTTTTTTCTACAAGTAACGGCCAGTTAATAGCTCTTACTAACTAAAC AGACCGATTAGGGATCTCGCACAAAATGTCGGCCAGAAGAGCAACCCATG CAGGCAGCTGGTACACGGACTCGGGCGCCGAGCTCTCGAGACAGTTGGAT CGTTGGCTGGGTGCCGCAGATTTGTCCCATGGACCGGCTCGTGCCATCAT TGCTCCACATGCTGGATATACGTACTGTGGAGCCTGCGCTGCCTTTGCCT ATCGCCAAGTTAGCCCAGTTGTCGTCAAGCGAATCTTCATACTGGGTCCC TCGCATCATGTGCGTCTGCGTGGCTGCGCCTTATCCGTGGCGAAGAAGTA CAGGACACCCCTCTATGATCTCAAAATTGATGCTCAGATCAACTCTGAGC TTGAGAAGACTGGAAAGTTTTCTTGGATGGACATGAAGACTGACGAGGAT GAACACTCCATCGAGATGCATTTACCCTACATTGCCAAAGTGATGGAGGA CTACAAGGATCAGTTCACCATTGTGCCTATTCTGGTGGGTTCGCTCAATC CCGAACAGGAGGCGCAGTACGGCAGCCTGCTGTCCTCGTATCTGATGGAC CCCACCAATCTGTTTGTGATATCTTCCGACTTTTGCCACTGGGGCCATCG CTTCAGCTATACCTACTATGACAGCTCCTGCGGAGCGATTCACAAGTCCA TCGAGAAGCTGGACAAGCAGGGCATGGACATCATTGAGTCGCTCAATCCG CACTCCTTCACCGAGTACTTGCGCAAGTACAACAATACGATATGCGGACG CCATCCCATCGGAGTAATGCTAGGCGCCGTGAAGGCACTGCAGGATCAGG GCTACGACAAGATGAGTTTCAAGTTCCTCAAGTACGCCCAGAGCAGCCAG TGTCAGGACATTGAGGACTCCAGCGTTAGCTACGCCTCCGGATCGCTCGT CTTCGAGATGTGAAAGCACTCAAGTATTTTAGCCACTCGACGGCAACTAA TTCTTGCTATTTAAGCGTAACGTTTTTATATTTACTAGCATCAAATTGAA AATTTAACAATAAATCCAAAATCCCCAACCAGTTTCAATTTAGTCGGCAT TGTTTTATCAATTATAACAAAATACAATTAACAATTAAAATCGCAAGGAG AAATAAAGCTCATTTTGATAATTTAGCTTTGATTATTAGCATAGATTTAG TTAATTTAAGGGGAATTGAATAAAAACACACAATCGCAGGATATGTGAAC TTCCATTTGAGTTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 8833636..8834398 | 1263..501 | 3800 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 8836383..8836507 | 125..1 | 625 | 100 | Minus |
chr3R | 27901430 | chr3R | 8834634..8834746 | 388..276 | 565 | 100 | Minus |
chr3R | 27901430 | chr3R | 8834456..8834567 | 500..389 | 545 | 99.1 | Minus |
chr3R | 27901430 | chr3R | 8834941..8835023 | 206..124 | 415 | 100 | Minus |
chr3R | 27901430 | chr3R | 8834811..8834879 | 275..207 | 345 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 13008382..13009146 | 1265..501 | 3825 | 100 | Minus |
3R | 32079331 | 3R | 13011131..13011255 | 125..1 | 625 | 100 | Minus |
3R | 32079331 | 3R | 13009382..13009494 | 388..276 | 565 | 100 | Minus |
3R | 32079331 | 3R | 13009204..13009315 | 500..389 | 560 | 100 | Minus |
3R | 32079331 | 3R | 13009689..13009771 | 206..124 | 415 | 100 | Minus |
3R | 32079331 | 3R | 13009559..13009627 | 275..207 | 345 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 12749213..12749977 | 1265..501 | 3825 | 100 | Minus |
3R | 31820162 | 3R | 12751962..12752086 | 125..1 | 625 | 100 | Minus |
3R | 31820162 | 3R | 12750213..12750325 | 388..276 | 565 | 100 | Minus |
3R | 31820162 | 3R | 12750035..12750146 | 500..389 | 560 | 100 | Minus |
3R | 31820162 | 3R | 12750520..12750602 | 206..124 | 415 | 100 | Minus |
3R | 31820162 | 3R | 12750390..12750458 | 275..207 | 345 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Penelope | 4158 | Dvir\Penelope DV49102 4158bp Derived from U49102 (Rel. 69, Last updated, Version 4). | 411..478 | 1187..1117 | 149 | 71.8 | Minus |
Dvir\Penelope | 4158 | Dvir\Penelope DV49102 4158bp Derived from U49102 (Rel. 69, Last updated, Version 4). | 3191..3258 | 1187..1117 | 149 | 71.8 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 8834456..8834567 | 389..500 | 99 | <- | Minus |
chr3R | 8834634..8834746 | 276..388 | 100 | <- | Minus |
chr3R | 8834811..8834879 | 207..275 | 100 | <- | Minus |
chr3R | 8834941..8835022 | 125..206 | 100 | <- | Minus |
chr3R | 8836384..8836507 | 1..124 | 100 | Minus | |
chr3R | 8833636..8834398 | 501..1263 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8031-RA | 1..888 | 76..963 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8031-RA | 1..888 | 76..963 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8031-RA | 1..888 | 76..963 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8031-RA | 1..888 | 76..963 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8031-RA | 1..888 | 76..963 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8031-RA | 1..1263 | 1..1263 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8031-RA | 34..1296 | 1..1263 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8031-RA | 56..1318 | 1..1263 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8031-RA | 1..1263 | 1..1263 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8031-RA | 56..1318 | 1..1263 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13008384..13009146 | 501..1263 | 100 | <- | Minus |
3R | 13009204..13009315 | 389..500 | 100 | <- | Minus |
3R | 13009382..13009494 | 276..388 | 100 | <- | Minus |
3R | 13009559..13009627 | 207..275 | 100 | <- | Minus |
3R | 13009689..13009770 | 125..206 | 100 | <- | Minus |
3R | 13011132..13011255 | 1..124 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13008384..13009146 | 501..1263 | 100 | <- | Minus |
3R | 13009204..13009315 | 389..500 | 100 | <- | Minus |
3R | 13009382..13009494 | 276..388 | 100 | <- | Minus |
3R | 13009559..13009627 | 207..275 | 100 | <- | Minus |
3R | 13009689..13009770 | 125..206 | 100 | <- | Minus |
3R | 13011132..13011255 | 1..124 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13008384..13009146 | 501..1263 | 100 | <- | Minus |
3R | 13009204..13009315 | 389..500 | 100 | <- | Minus |
3R | 13009382..13009494 | 276..388 | 100 | <- | Minus |
3R | 13009559..13009627 | 207..275 | 100 | <- | Minus |
3R | 13009689..13009770 | 125..206 | 100 | <- | Minus |
3R | 13011132..13011255 | 1..124 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 8834106..8834868 | 501..1263 | 100 | <- | Minus |
arm_3R | 8834926..8835037 | 389..500 | 100 | <- | Minus |
arm_3R | 8835104..8835216 | 276..388 | 100 | <- | Minus |
arm_3R | 8835281..8835349 | 207..275 | 100 | <- | Minus |
arm_3R | 8835411..8835492 | 125..206 | 100 | <- | Minus |
arm_3R | 8836854..8836977 | 1..124 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12750035..12750146 | 389..500 | 100 | <- | Minus |
3R | 12750213..12750325 | 276..388 | 100 | <- | Minus |
3R | 12750390..12750458 | 207..275 | 100 | <- | Minus |
3R | 12750520..12750601 | 125..206 | 100 | <- | Minus |
3R | 12751963..12752086 | 1..124 | 100 | Minus | |
3R | 12749215..12749977 | 501..1263 | 100 | <- | Minus |
Translation from 75 to 962
> LP04475.pep MSARRATHAGSWYTDSGAELSRQLDRWLGAADLSHGPARAIIAPHAGYTY CGACAAFAYRQVSPVVVKRIFILGPSHHVRLRGCALSVAKKYRTPLYDLK IDAQINSELEKTGKFSWMDMKTDEDEHSIEMHLPYIAKVMEDYKDQFTIV PILVGSLNPEQEAQYGSLLSSYLMDPTNLFVISSDFCHWGHRFSYTYYDS SCGAIHKSIEKLDKQGMDIIESLNPHSFTEYLRKYNNTICGRHPIGVMLG AVKALQDQGYDKMSFKFLKYAQSSQCQDIEDSSVSYASGSLVFEM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18089-PA | 295 | GF18089-PA | 1..295 | 1..295 | 1524 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17083-PA | 295 | GG17083-PA | 1..295 | 1..295 | 1550 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19198-PA | 295 | GH19198-PA | 1..294 | 1..294 | 1437 | 87.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8031-PA | 295 | CG8031-PA | 1..295 | 1..295 | 1565 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24231-PA | 295 | GI24231-PA | 1..294 | 1..294 | 1441 | 87.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23150-PA | 269 | GL23150-PA | 1..269 | 1..295 | 1313 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20778-PA | 295 | GA20778-PA | 1..295 | 1..295 | 1505 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25966-PA | 295 | GM25966-PA | 1..295 | 1..295 | 1531 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20526-PA | 295 | GD20526-PA | 1..295 | 1..295 | 1530 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10804-PA | 295 | GJ10804-PA | 1..294 | 1..294 | 1457 | 89.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10855-PA | 295 | GK10855-PA | 1..295 | 1..295 | 1493 | 91.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24472-PA | 295 | GE24472-PA | 1..295 | 1..295 | 1553 | 96.6 | Plus |
Translation from 75 to 962
> LP04475.hyp MSARRATHAGSWYTDSGAELSRQLDRWLGAADLSHGPARAIIAPHAGYTY CGACAAFAYRQVSPVVVKRIFILGPSHHVRLRGCALSVAKKYRTPLYDLK IDAQINSELEKTGKFSWMDMKTDEDEHSIEMHLPYIAKVMEDYKDQFTIV PILVGSLNPEQEAQYGSLLSSYLMDPTNLFVISSDFCHWGHRFSYTYYDS SCGAIHKSIEKLDKQGMDIIESLNPHSFTEYLRKYNNTICGRHPIGVMLG AVKALQDQGYDKMSFKFLKYAQSSQCQDIEDSSVSYASGSLVFEM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8031-PA | 295 | CG8031-PA | 1..295 | 1..295 | 1565 | 100 | Plus |