BDGP Sequence Production Resources |
Search the DGRC for LP04559
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 45 |
Well: | 59 |
Vector: | pOT2 |
Associated Gene/Transcript | Gs2-RB |
Protein status: | LP04559.pep: gold |
Sequenced Size: | 1968 |
Gene | Date | Evidence |
---|---|---|
CG1743 | 2003-01-01 | Sim4 clustering to Release 3 |
Gs2 | 2008-04-29 | Release 5.5 accounting |
Gs2 | 2008-08-15 | Release 5.9 accounting |
Gs2 | 2008-12-18 | 5.12 accounting |
1968 bp (1968 high quality bases) assembled on 2005-08-02
GenBank Submission: BT023772
> LP04559.complete CCCACTGTATCAGCTCCAAGATCGAAACTCCCAATTGGAATTAGAGCAAA GGGCTCCCTCCAAACAAAAAAAAAAAAATAAAATAAAAAGAGAAAACAAC AAGAGAAAACAACAAGATAACATTCTACGCAAGTGTTAGGTGTCAAAGTT CGCGTCTGGAATTACTTTCATTCACCGTTCGGGAAATCATTAAAATCACA CAATAAGATGCATTCCGCGATCCTGGAGGACTCGCCCAACGCGCGCATCA ACAAGACGATCCTCGATCGCTATCTTTCACTGCCGCTGCAGGAGAACATC GTTCAGGCCACCTACGTGTGGATCGATGGCACCGGCGAGGATTTGCGCTG CAAGGATCGCACCCTCGACTTCATTCCCCAGAGTCCCAAGGAGCTACCCG TTTGGAACTACGATGGAAGCTCGTGCTACCAGGCCGAGGGATCCAACTCG GACACCTACCTGTATCCGGTGGCCATCTACAAGGACCCGTTCCGGCGCGG CAACAACATCCTGGTGATGTGCGACACCTACAAGTTCGACGGCACCCCCA CGGACACCAACAAGCGCAAGACCTGCCTGGAGGTGGCCAACAAGTGCGCC GCAGAGGAGCCCTGGTTCGGTATTGAGCAGGAGTACACCTTCCTCGACTT TGATGGCCATCCATTGGGCTGGCCCAAGAACGGTTTCCCCGGACCCCAGG GACCCTACTATTGCGGCGTTGGTGCCAACAAGGTCTACGCCCGCGACATT GTGGATGCCCACTATCGCGCCTGTCTGTACGCCGGCATCAAGGTGTCCGG CACCAATGCCGAGGTGATGCCCGCCCAGTGGGAGTTCCAGGTGGGACCCT GCGAGGGCATCTCCATTGGTGATGATCTCTGGATGGCCCGTTTCCTCTTG CATCGCATCTCCGAGGAGTTTGGCATTGTGTCCACTCTGGATCCCAAGCC GATGCCTGGCGATTGGAACGGTGCTGGTGCCCACACCAATGTGTCGACGA AGGCAATGCGCGAAGATGGCGGCATTCGGGACATTGAGAAGGCGGTGGCC AAGCTGTCCAAGTGCCACGAGAGGCACATTCGCGCCTACGATCCCAAGCA GGGACAGGACAATGCCCGTCGTCTGACCGGAAAGCACGAGACGAGCTCCA TCAACGATTTCAGTGCCGGCGTGGCCAATCGCGGATGCAGCATACGCATT CCTCGCGGCGTCAATGATGATGGCAAGGGCTATTTCGAGGATCGCCGCCC CAGCTCCAACTGCGATCCCTACTCCGTGGTGGAGGCCATCTTGCGCACCA TCTGCCTGGACGAATAGGACGGGATGGGATATGCCTATCTCCCGAATTGT TGTTATCGATTTATAGCTTGTTGTTAAACCACCTTTTGATCCACTGATCC AATGACCCACGAACAACCCGATCAACTGAACACCGAACGCGAAGTTATTT GCATAACGTAGGCTTAGTTTTTACCTAACGTATTTCCCATAAACCAGAAC TAGAAACCTAAGGCAGCCCCCTCCTCTTGCTGATATTTTCAAAGTTTTTT TTTTCTTTTTTTTGTAGCTGCTGTTACTTAGGTTTTAGTATGAGTTTTTT TTTTTTGTTTGTTGACCAATCAAATATATAGTAATGTGGTCAGCGTAATG ACGATGAAATGAAGAGGAGCAAGAACCCAAAAAAGACATCCCCACGAAGA AGAAGAAAAAAAAAAGATAACATAAAGCTCTAGTATCAAACAATTCCTTG AGACCCCGCAAAAAAAAGAAAACCCAGCCCCCTACTTGTTAATGATATTA AATAATTAACTTTAATCCTAAACTACATACATATACTCTCTAGTTAAGTA AATGCACTAAAAAATAAAAAAAAATACACAATACAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gs2-RB | 1910 | Gs2-RB | 21..1906 | 1..1887 | 9395 | 99.9 | Plus |
Gs2-RC | 2010 | Gs2-RC | 240..1907 | 219..1887 | 8305 | 99.9 | Plus |
Gs2.f | 1720 | Gs2.f | 82..1720 | 219..1858 | 8160 | 99.9 | Plus |
Gs2.f | 1720 | Gs2.f | 1..69 | 150..218 | 345 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 11320424..11321379 | 925..1884 | 4620 | 99.5 | Plus |
chrX | 22417052 | chrX | 11319713..11320056 | 391..734 | 1675 | 99.1 | Plus |
chrX | 22417052 | chrX | 11314032..11314247 | 1..219 | 1015 | 98.6 | Plus |
chrX | 22417052 | chrX | 11320165..11320358 | 731..924 | 970 | 100 | Plus |
chrX | 22417052 | chrX | 11315470..11315642 | 219..391 | 865 | 100 | Plus |
chr2L | 23010047 | chr2L | 133010..133244 | 605..839 | 380 | 77.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 11429239..11430200 | 925..1887 | 4765 | 99.9 | Plus |
X | 23542271 | X | 11428528..11428871 | 391..734 | 1720 | 100 | Plus |
X | 23542271 | X | 11422855..11423073 | 1..219 | 1095 | 100 | Plus |
X | 23542271 | X | 11428980..11429173 | 731..924 | 970 | 100 | Plus |
X | 23542271 | X | 11424282..11424454 | 219..391 | 865 | 100 | Plus |
2L | 23513712 | 2L | 132973..133207 | 605..839 | 380 | 77.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 11437337..11438298 | 925..1887 | 4775 | 99.8 | Plus |
X | 23527363 | X | 11436626..11436969 | 391..734 | 1720 | 100 | Plus |
X | 23527363 | X | 11430953..11431171 | 1..219 | 1095 | 100 | Plus |
X | 23527363 | X | 11437078..11437271 | 731..924 | 970 | 100 | Plus |
X | 23527363 | X | 11432380..11432552 | 219..391 | 865 | 100 | Plus |
2L | 23513712 | 2L | 132973..133130 | 605..762 | 250 | 77.2 | Plus |
2L | 23513712 | 2L | 133137..133207 | 769..839 | 190 | 84.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 11319714..11320054 | 392..732 | 99 | -> | Plus |
chrX | 11320167..11320358 | 733..924 | 100 | -> | Plus |
chrX | 11320424..11321353 | 925..1858 | 99 | Plus | |
chrX | 11315470..11315642 | 219..391 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gs2-RB | 1..1110 | 208..1317 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gs2-RB | 1..1110 | 208..1317 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gs2-RB | 1..1110 | 208..1317 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gs2-RB | 1..1110 | 208..1317 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gs2-RB | 1..1110 | 208..1317 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gs2-RB | 1..1857 | 1..1858 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gs2-RB | 1..1857 | 1..1858 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gs2-RB | 24..1880 | 1..1858 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gs2-RB | 1..1857 | 1..1858 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gs2-RB | 24..1880 | 1..1858 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11422855..11423072 | 1..218 | 100 | -> | Plus |
X | 11424282..11424454 | 219..391 | 100 | -> | Plus |
X | 11428529..11428869 | 392..732 | 100 | -> | Plus |
X | 11428982..11429173 | 733..924 | 100 | -> | Plus |
X | 11429239..11430171 | 925..1858 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11422855..11423072 | 1..218 | 100 | -> | Plus |
X | 11424282..11424454 | 219..391 | 100 | -> | Plus |
X | 11428529..11428869 | 392..732 | 100 | -> | Plus |
X | 11428982..11429173 | 733..924 | 100 | -> | Plus |
X | 11429239..11430171 | 925..1858 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11422855..11423072 | 1..218 | 100 | -> | Plus |
X | 11424282..11424454 | 219..391 | 100 | -> | Plus |
X | 11428529..11428869 | 392..732 | 100 | -> | Plus |
X | 11428982..11429173 | 733..924 | 100 | -> | Plus |
X | 11429239..11430171 | 925..1858 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 11316888..11317105 | 1..218 | 100 | -> | Plus |
arm_X | 11318315..11318487 | 219..391 | 100 | -> | Plus |
arm_X | 11322562..11322902 | 392..732 | 100 | -> | Plus |
arm_X | 11323015..11323206 | 733..924 | 100 | -> | Plus |
arm_X | 11323272..11324204 | 925..1858 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11430953..11431170 | 1..218 | 100 | -> | Plus |
X | 11432380..11432552 | 219..391 | 100 | -> | Plus |
X | 11436627..11436967 | 392..732 | 100 | -> | Plus |
X | 11437080..11437271 | 733..924 | 100 | -> | Plus |
X | 11437337..11438269 | 925..1858 | 99 | Plus |
Translation from 207 to 1316
> LP04559.pep MHSAILEDSPNARINKTILDRYLSLPLQENIVQATYVWIDGTGEDLRCKD RTLDFIPQSPKELPVWNYDGSSCYQAEGSNSDTYLYPVAIYKDPFRRGNN ILVMCDTYKFDGTPTDTNKRKTCLEVANKCAAEEPWFGIEQEYTFLDFDG HPLGWPKNGFPGPQGPYYCGVGANKVYARDIVDAHYRACLYAGIKVSGTN AEVMPAQWEFQVGPCEGISIGDDLWMARFLLHRISEEFGIVSTLDPKPMP GDWNGAGAHTNVSTKAMREDGGIRDIEKAVAKLSKCHERHIRAYDPKQGQ DNARRLTGKHETSSINDFSAGVANRGCSIRIPRGVNDDGKGYFEDRRPSS NCDPYSVVEAILRTICLDE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22546-PA | 299 | GF22546-PA | 1..298 | 1..298 | 1567 | 96.3 | Plus |
Dana\GF14864-PA | 400 | GF14864-PA | 32..400 | 2..369 | 1327 | 64.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18416-PA | 369 | GG18416-PA | 1..369 | 1..369 | 1964 | 98.4 | Plus |
Dere\GG24698-PA | 399 | GG24698-PA | 32..399 | 2..369 | 1312 | 64.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12401-PA | 369 | GH12401-PA | 1..369 | 1..369 | 1910 | 94.3 | Plus |
Dgri\GH10061-PA | 400 | GH10061-PA | 32..400 | 2..369 | 1335 | 64.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gs2-PB | 369 | CG1743-PB | 1..369 | 1..369 | 2021 | 100 | Plus |
Gs2-PD | 373 | CG1743-PD | 1..373 | 1..369 | 2006 | 98.9 | Plus |
Gs2-PF | 369 | CG1743-PF | 1..369 | 1..369 | 2004 | 99.2 | Plus |
Gs2-PE | 369 | CG1743-PE | 1..369 | 1..369 | 2004 | 99.2 | Plus |
Gs2-PC | 369 | CG1743-PC | 1..369 | 1..369 | 2004 | 99.2 | Plus |
Gs2-PA | 266 | CG1743-PA | 1..266 | 104..369 | 1468 | 100 | Plus |
Gs1-PD | 399 | CG2718-PD | 33..399 | 3..369 | 1303 | 64.9 | Plus |
Gs1-PB | 399 | CG2718-PB | 33..399 | 3..369 | 1303 | 64.9 | Plus |
Gs1-PC | 399 | CG2718-PC | 33..399 | 3..369 | 1303 | 64.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15717-PA | 369 | GI15717-PA | 1..369 | 1..369 | 1908 | 94.3 | Plus |
Dmoj\GI16461-PA | 400 | GI16461-PA | 32..400 | 2..369 | 1324 | 65 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14860-PA | 369 | GL14860-PA | 1..369 | 1..369 | 1938 | 97 | Plus |
Dper\GL13945-PA | 400 | GL13945-PA | 33..400 | 3..369 | 1329 | 65.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14508-PA | 369 | GA14508-PA | 1..369 | 1..369 | 1938 | 97 | Plus |
Dpse\GA15446-PA | 400 | GA15446-PA | 33..400 | 3..369 | 1329 | 65.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13079-PA | 369 | GM13079-PA | 1..369 | 1..369 | 1993 | 100 | Plus |
Dsec\GM16716-PA | 399 | GM16716-PA | 32..399 | 2..369 | 1311 | 64.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17021-PA | 310 | GD17021-PA | 3..310 | 62..369 | 1665 | 99.7 | Plus |
Dsim\GD23002-PA | 399 | GD23002-PA | 32..399 | 2..369 | 1315 | 64.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15245-PA | 369 | GJ15245-PA | 1..369 | 1..369 | 1911 | 95.1 | Plus |
Dvir\GJ16218-PA | 400 | GJ16218-PA | 33..400 | 3..369 | 1339 | 64.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16230-PA | 369 | GK16230-PA | 1..369 | 1..369 | 1934 | 96.5 | Plus |
Dwil\GK24485-PA | 367 | GK24485-PA | 1..367 | 1..369 | 1648 | 81.8 | Plus |
Dwil\GK24614-PA | 367 | GK24614-PA | 1..367 | 1..369 | 1555 | 77.2 | Plus |
Dwil\GK24607-PA | 397 | GK24607-PA | 30..397 | 3..369 | 1319 | 64.1 | Plus |
Translation from 207 to 1316
> LP04559.hyp MHSAILEDSPNARINKTILDRYLSLPLQENIVQATYVWIDGTGEDLRCKD RTLDFIPQSPKELPVWNYDGSSCYQAEGSNSDTYLYPVAIYKDPFRRGNN ILVMCDTYKFDGTPTDTNKRKTCLEVANKCAAEEPWFGIEQEYTFLDFDG HPLGWPKNGFPGPQGPYYCGVGANKVYARDIVDAHYRACLYAGIKVSGTN AEVMPAQWEFQVGPCEGISIGDDLWMARFLLHRISEEFGIVSTLDPKPMP GDWNGAGAHTNVSTKAMREDGGIRDIEKAVAKLSKCHERHIRAYDPKQGQ DNARRLTGKHETSSINDFSAGVANRGCSIRIPRGVNDDGKGYFEDRRPSS NCDPYSVVEAILRTICLDE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gs2-PB | 369 | CG1743-PB | 1..369 | 1..369 | 2021 | 100 | Plus |
Gs2-PD | 373 | CG1743-PD | 1..373 | 1..369 | 2006 | 98.9 | Plus |
Gs2-PF | 369 | CG1743-PF | 1..369 | 1..369 | 2004 | 99.2 | Plus |
Gs2-PE | 369 | CG1743-PE | 1..369 | 1..369 | 2004 | 99.2 | Plus |
Gs2-PC | 369 | CG1743-PC | 1..369 | 1..369 | 2004 | 99.2 | Plus |