BDGP Sequence Production Resources |
Search the DGRC for LP04613
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 46 |
Well: | 13 |
Vector: | pOT2 |
Associated Gene/Transcript | CG10877-RA |
Protein status: | LP04613.pep: gold |
Preliminary Size: | 1424 |
Sequenced Size: | 1629 |
Gene | Date | Evidence |
---|---|---|
CG10877 | 2002-01-01 | Sim4 clustering to Release 2 |
CG10877 | 2002-05-18 | Blastp of sequenced clone |
CG10877 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10877 | 2008-04-29 | Release 5.5 accounting |
CG10877 | 2008-08-15 | Release 5.9 accounting |
CG10877 | 2008-12-18 | 5.12 accounting |
1629 bp (1629 high quality bases) assembled on 2002-05-18
GenBank Submission: AY119018
> LP04613.complete CGCGGATCAAGTCGGCCCGCAAAACTTTCCACACACAACATACACATGTG TACTGGCGACAGATTAGTTGACCCACAAGTAGCAACAAAAAAAGAACCAT GTTGTCACAGAATTTACGCCTCGTCCGGGGATTGCTTAATTACGGAGTTT GCCGCCCGAGCTTGAGAAACTTCGCAGCCGTTGGCGATAAAAACAACGCA GCCGATAATGCTAATGCCAGCGATGTGGACGAACGCCACCCGCTGCATGG TATCCGGATTTTGGACCTATCGCGCATCATCGCCGGCCCCTATTGCACCA TGGTTCTGGCGGATCTCGGCGCGGAAGTTATCAAGGTGGAGCGTCCACAC TTTGGCGATGAGGCGCGTAAGTGGGGACCACCCTTTCTAAAGAACAGCAA CGATGCCGCCTACTTCCTGGCTCCCAATCGCAATAAACGGAGCATCTGCA TCGATATCAAGCGCGGCACGCAACTCCTTCATCGCCTGGCCGAGATTAGC GACGTGCTGGTGGAGAATTATGTGCCCGGCACCTTGGAGCGTTACGGCCT GGGCTACGAGCAGTTGCGTAAGGTGAATCCCAAACTGATCTATTGCTCAA TGACGGGTTATGGCTCTGTGGGACCGTATGCCAAGCGACCCGGCTACGAT GTGATTGCCTCCTCGGTTGGAGGACTGATGCACATCACCGGCGAGCGGGA TGGACCGCCCAGCAAGGTGGGCGTGGCTGTGACGGATATGTCCACAGGAC TGTACGCCCATGGAGCAATTTTGGCAGCCCTCTATCAAAGGACCCGCACG CAACGTGGCCAGAAGATCGAAGTCGACCTGTTGTCCACCTGCTGCTCCCT GCTGCTCAACGTGGGTAGCAACTACCTGAATTCCGGGGTCGAAGCAGGAA GGATGGGCACCGCACACTCCAGCATCGTTCCGTATCAGAGCTTCAAGACG AAGGACGGCTATCTCACCCTGGGCACTGGCAGTGATGTTCAGTTTGTGGA CCTGTGTCGCCGCCTAAAAGTGGAACATTTGGCGCAGAATCCCAAATTCA AGACCAACAAGGATCGTGTGACCAATCGAGTGGAGCTGCTGGGAATCCTA GAGCAAATGCTATCCGAGGACACCTCGCGCAACTGGATGAAACTTTTCGA GGGCGCCTCCTTTCCCGTGGGACCTGTTAACTCCATTCCCGAGGTCTTCG AGGACGAGCATATAAAAGCCATTGGCCTGGTGAAAAGCCTGCGGCATCCC AAGGACGAAACAGTCAAGGTGGTTGGTCCTCCTGTGACCTTCAGCGAAGC GCGAAACGATGCCCGGACAGCTCCTCCGATTCTTGGCCAGCACACGGATG AAGTGCTGGGCGAACTACTGGGTTACGGGCCGGATGAGCTGGCCAAGCTG AAGAAGGATAACATTATTCAGTAACCCGATTGGGATTTCGGACAGTCTAA AGTGATTTGAATTCCTAAATCCTCTGATATATACTGCTTTATATGGTCTT TTGCGACCAATATTTTAGTGATAATCATGCATTTACCATTAGACCGACTA AAGGCCTTAAAAAATAAATGACAATTTCTCATAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10877-RA | 1582 | CG10877-RA | 1..1582 | 1..1582 | 7910 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 16386400..16387981 | 1582..1 | 7910 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 20562481..20564067 | 1587..1 | 7935 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 20303312..20304898 | 1587..1 | 7935 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy2 | 6841 | gypsy2 GYPSY2 6841bp | 5319..5435 | 112..229 | 120 | 59.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 16386400..16387981 | 1..1582 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10877-RA | 1..1326 | 99..1424 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10877-RA | 1..1326 | 99..1424 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10877-RA | 1..1326 | 99..1424 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10877-RA | 1..1326 | 99..1424 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10877-RA | 1..1326 | 99..1424 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10877-RA | 1..1582 | 1..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10877-RA | 1..1582 | 1..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10877-RA | 1..1582 | 1..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10877-RA | 1..1582 | 1..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10877-RA | 1..1582 | 1..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20562486..20564067 | 1..1582 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20562486..20564067 | 1..1582 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20562486..20564067 | 1..1582 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 16388208..16389789 | 1..1582 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20303317..20304898 | 1..1582 | 100 | Minus |
Translation from 98 to 1423
> LP04613.pep MLSQNLRLVRGLLNYGVCRPSLRNFAAVGDKNNAADNANASDVDERHPLH GIRILDLSRIIAGPYCTMVLADLGAEVIKVERPHFGDEARKWGPPFLKNS NDAAYFLAPNRNKRSICIDIKRGTQLLHRLAEISDVLVENYVPGTLERYG LGYEQLRKVNPKLIYCSMTGYGSVGPYAKRPGYDVIASSVGGLMHITGER DGPPSKVGVAVTDMSTGLYAHGAILAALYQRTRTQRGQKIEVDLLSTCCS LLLNVGSNYLNSGVEAGRMGTAHSSIVPYQSFKTKDGYLTLGTGSDVQFV DLCRRLKVEHLAQNPKFKTNKDRVTNRVELLGILEQMLSEDTSRNWMKLF EGASFPVGPVNSIPEVFEDEHIKAIGLVKSLRHPKDETVKVVGPPVTFSE ARNDARTAPPILGQHTDEVLGELLGYGPDELAKLKKDNIIQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18334-PA | 450 | GF18334-PA | 4..450 | 1..441 | 1845 | 76.5 | Plus |
Dana\GF14549-PA | 373 | GF14549-PA | 2..308 | 48..374 | 289 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15379-PA | 439 | GG15379-PA | 1..439 | 1..441 | 2245 | 95.9 | Plus |
Dere\GG21551-PA | 374 | GG21551-PA | 2..307 | 48..373 | 277 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14164-PA | 444 | GH14164-PA | 15..444 | 18..441 | 1767 | 74.4 | Plus |
Dgri\GH10846-PA | 373 | GH10846-PA | 2..304 | 48..371 | 285 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10877-PA | 441 | CG10877-PA | 1..441 | 1..441 | 2294 | 100 | Plus |
Amacr-PB | 373 | CG9319-PB | 2..305 | 48..371 | 297 | 27.8 | Plus |
Amacr-PA | 373 | CG9319-PA | 2..305 | 48..371 | 297 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10535-PA | 443 | GI10535-PA | 3..443 | 1..441 | 1747 | 73.6 | Plus |
Dmoj\GI19587-PA | 375 | GI19587-PA | 2..307 | 48..371 | 291 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13930-PA | 447 | GL13930-PA | 26..447 | 17..441 | 1816 | 79.3 | Plus |
Dper\GL19592-PA | 373 | GL19592-PA | 2..365 | 48..440 | 306 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10613-PA | 440 | GA10613-PA | 1..440 | 1..441 | 1856 | 78.4 | Plus |
Dpse\GA21697-PA | 373 | GA21697-PA | 2..365 | 48..440 | 313 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23184-PA | 441 | GM23184-PA | 1..441 | 1..441 | 2309 | 98 | Plus |
Dsec\GM23310-PA | 374 | GM23310-PA | 2..305 | 48..371 | 294 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20057-PA | 441 | GD20057-PA | 1..441 | 1..441 | 2329 | 99.1 | Plus |
Dsim\GD21682-PA | 374 | GD21682-PA | 2..305 | 48..371 | 294 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24187-PA | 442 | GJ24187-PA | 18..442 | 21..441 | 1770 | 77.2 | Plus |
Dvir\GJ17422-PA | 375 | GJ17422-PA | 2..307 | 48..371 | 285 | 27.1 | Plus |
Translation from 98 to 1423
> LP04613.hyp MLSQNLRLVRGLLNYGVCRPSLRNFAAVGDKNNAADNANASDVDERHPLH GIRILDLSRIIAGPYCTMVLADLGAEVIKVERPHFGDEARKWGPPFLKNS NDAAYFLAPNRNKRSICIDIKRGTQLLHRLAEISDVLVENYVPGTLERYG LGYEQLRKVNPKLIYCSMTGYGSVGPYAKRPGYDVIASSVGGLMHITGER DGPPSKVGVAVTDMSTGLYAHGAILAALYQRTRTQRGQKIEVDLLSTCCS LLLNVGSNYLNSGVEAGRMGTAHSSIVPYQSFKTKDGYLTLGTGSDVQFV DLCRRLKVEHLAQNPKFKTNKDRVTNRVELLGILEQMLSEDTSRNWMKLF EGASFPVGPVNSIPEVFEDEHIKAIGLVKSLRHPKDETVKVVGPPVTFSE ARNDARTAPPILGQHTDEVLGELLGYGPDELAKLKKDNIIQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10877-PA | 441 | CG10877-PA | 1..441 | 1..441 | 2294 | 100 | Plus |
CG9319-PB | 373 | CG9319-PB | 2..305 | 48..371 | 297 | 27.8 | Plus |
CG9319-PA | 373 | CG9319-PA | 2..305 | 48..371 | 297 | 27.8 | Plus |