BDGP Sequence Production Resources |
Search the DGRC for LP04941
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 49 |
Well: | 41 |
Vector: | pOT2 |
Associated Gene/Transcript | CG12118-RA |
Protein status: | LP04941.pep: gold |
Preliminary Size: | 1428 |
Sequenced Size: | 1249 |
Gene | Date | Evidence |
---|---|---|
CG12118 | 2001-01-01 | Release 2 assignment |
CG12118 | 2001-07-04 | Blastp of sequenced clone |
CG12118 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12118 | 2008-04-29 | Release 5.5 accounting |
CG12118 | 2008-08-15 | Release 5.9 accounting |
CG12118 | 2008-12-18 | 5.12 accounting |
1249 bp (1249 high quality bases) assembled on 2001-07-04
GenBank Submission: AY052039
> LP04941.complete AATCCAGTAGCAGCTGTGCGTCAAAAAAAAACTAGTCGTCTCTACTTTCA AATAGGCAATAGATTTAATCTGAAAACAAAATTCAACGTAAAATTCTAAA GCCACATAAAATCCGGCATTATTTGAAAGCGTCTGCAGAGCACAGCACTC CAAATCCAGTTCCGCCATCCAAGATTCTACGCATTTACAGAAGCATATGA TATAATAATGTCTCGATCATTGAGTCGCGTATTGGGTACCATCTGGGCGC CATCCCTGTCCATTTCACATACCGTACATCGCGGATCCAACAGACTGAAC GACCTACTGAGCACCAAGGTGACCAACACGGCCATCATTCCGGTGGCTAG ATACTCCAAGCGAAATGGCCCACCGTCGGATGCCGGCGGATACTTTAAGA CCGTCAAGTCGCGGGATCTCGACGACGACGATGAGCTAAATAGTTTGGAG AGTGAGCCCAACTGGGAACTGACCGCCGAAAGAGGCAATCGCTTCTATCT GCCAAATGGCATTGGGCCCGCCTGGCAGGGCGACAGCACCACCGTCGGTC TGCTCGAGCCGCTTGGCCACCTGGTTAACTTTCACAAGGGTCCCAATACG GACAAATCGCGCCTGGAATTCACCTGCTGTAAGTGTCCCCTGCTTATCCG TGTGCCACTCTTGGAGATCTTCCCGGTACCCGTCGTCGCACAGCAGTGCA TAAACATCACCATGCTTGTTCTCAGCCACGAAGGAGACATCGAAATGGGC GCTGCCAAGTTTGTCCTGGCAGCGCGGGAGATGTGCGATCGCCTGCTATC GTACGGCTACTGGGCGGACTTCATGAATCCGTTTAGCGGACGTCCATTCT TTCTACCACGGGAAGGGGCTAATCTATACAGGCTGGACTCACGCTTCCGT GGTCTAAACATGCGGCTTTCGGAACAGAACCGTTGCACAGTGATTTCCGC CGAGAAGAACGACAGCACCCGCTTCTCGGGCACCATCTATAGCACAGCGC CGAATCACTATGGGCAGCTGATGAAGCTGCTTGTGCCGCCGCCGCACAAG GTTGCCCATTGACGCGGATGATCAACGAAGTGGTTGCCATTGGAGTTGGA CTCCAAATGATGAAGCCGTAGCCTTTTAAGCGATGATGACTGTGTTAACT GTTTAGGTTTCCTGTTCCGACACTGTATATAGCCGACAATGCTGGTGTTA TATGCTGCGAAATATAATCGATAAGAATTTGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12118-RA | 1332 | CG12118-RA | 95..1326 | 1..1233 | 6125 | 99.9 | Plus |
CG12118-RB | 1315 | CG12118-RB | 265..1309 | 189..1233 | 5225 | 100 | Plus |
CG12106-RA | 1356 | CG12106-RA | 750..1225 | 1233..758 | 2380 | 100 | Minus |
CG12118-RB | 1315 | CG12118-RB | 95..267 | 1..174 | 830 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 9087362..9087949 | 759..172 | 2940 | 100 | Minus |
chrX | 22417052 | chrX | 9086561..9087034 | 1231..758 | 2370 | 100 | Minus |
chrX | 22417052 | chrX | 9088007..9088178 | 173..1 | 815 | 99.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TAHRE | 10463 | TAHRE OSV 10463bp | 9485..9567 | 22..104 | 126 | 64.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 9086561..9087032 | 760..1231 | 100 | <- | Minus |
chrX | 9087362..9087947 | 174..759 | 100 | <- | Minus |
chrX | 9088007..9088178 | 1..173 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12118-RB | 1..855 | 208..1062 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12118-RB | 1..855 | 208..1062 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12118-RA | 1..855 | 208..1062 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12118-RB | 1..855 | 208..1062 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12118-RA | 1..855 | 208..1062 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12118-RA | 95..1324 | 1..1231 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12118-RA | 95..1324 | 1..1231 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12118-RA | 48..1277 | 1..1231 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12118-RA | 95..1324 | 1..1231 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12118-RA | 48..1277 | 1..1231 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9194750..9195221 | 760..1231 | 100 | <- | Minus |
X | 9195551..9196136 | 174..759 | 100 | <- | Minus |
X | 9196196..9196367 | 1..173 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9194750..9195221 | 760..1231 | 100 | <- | Minus |
X | 9195551..9196136 | 174..759 | 100 | <- | Minus |
X | 9196196..9196367 | 1..173 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9194750..9195221 | 760..1231 | 100 | <- | Minus |
X | 9195551..9196136 | 174..759 | 100 | <- | Minus |
X | 9196196..9196367 | 1..173 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 9088783..9089254 | 760..1231 | 100 | <- | Minus |
arm_X | 9089584..9090169 | 174..759 | 100 | <- | Minus |
arm_X | 9090229..9090400 | 1..173 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9202848..9203319 | 760..1231 | 100 | <- | Minus |
X | 9203649..9204234 | 174..759 | 100 | <- | Minus |
X | 9204294..9204465 | 1..173 | 99 | Minus |
Translation from 207 to 1061
> LP04941.hyp MSRSLSRVLGTIWAPSLSISHTVHRGSNRLNDLLSTKVTNTAIIPVARYS KRNGPPSDAGGYFKTVKSRDLDDDDELNSLESEPNWELTAERGNRFYLPN GIGPAWQGDSTTVGLLEPLGHLVNFHKGPNTDKSRLEFTCCKCPLLIRVP LLEIFPVPVVAQQCINITMLVLSHEGDIEMGAAKFVLAAREMCDRLLSYG YWADFMNPFSGRPFFLPREGANLYRLDSRFRGLNMRLSEQNRCTVISAEK NDSTRFSGTIYSTAPNHYGQLMKLLVPPPHKVAH*
Translation from 207 to 1061
> LP04941.pep MSRSLSRVLGTIWAPSLSISHTVHRGSNRLNDLLSTKVTNTAIIPVARYS KRNGPPSDAGGYFKTVKSRDLDDDDELNSLESEPNWELTAERGNRFYLPN GIGPAWQGDSTTVGLLEPLGHLVNFHKGPNTDKSRLEFTCCKCPLLIRVP LLEIFPVPVVAQQCINITMLVLSHEGDIEMGAAKFVLAAREMCDRLLSYG YWADFMNPFSGRPFFLPREGANLYRLDSRFRGLNMRLSEQNRCTVISAEK NDSTRFSGTIYSTAPNHYGQLMKLLVPPPHKVAH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22631-PA | 288 | GF22631-PA | 1..280 | 1..280 | 929 | 66.6 | Plus |
Dana\GF14778-PA | 2023 | GF14778-PA | 98..310 | 69..276 | 171 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18995-PA | 285 | GG18995-PA | 1..284 | 1..283 | 1199 | 79.2 | Plus |
Dere\GG21069-PA | 2028 | GG21069-PA | 121..317 | 88..276 | 163 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17752-PA | 284 | GH17752-PA | 1..277 | 1..282 | 819 | 57 | Plus |
Dgri\GH11695-PA | 1958 | GH11695-PA | 62..238 | 96..265 | 193 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12118-PB | 284 | CG12118-PB | 1..284 | 1..284 | 1510 | 100 | Plus |
CG12118-PA | 284 | CG12118-PA | 1..284 | 1..284 | 1510 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15506-PA | 288 | GI15506-PA | 1..281 | 1..282 | 879 | 61.8 | Plus |
Dmoj\GI17139-PA | 1984 | GI17139-PA | 46..261 | 43..265 | 199 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20349-PA | 284 | GL20349-PA | 1..280 | 1..284 | 806 | 56.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11412-PA | 284 | GA11412-PA | 1..273 | 1..277 | 791 | 56.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13671-PA | 284 | GM13671-PA | 1..284 | 1..284 | 1303 | 88 | Plus |
Dsec\GM17219-PA | 2010 | GM17219-PA | 102..298 | 88..276 | 170 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16078-PA | 284 | GD16078-PA | 1..284 | 1..284 | 1311 | 87.7 | Plus |
Dsim\GD24093-PA | 2003 | GD24093-PA | 82..291 | 70..276 | 184 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19266-PA | 288 | GJ19266-PA | 1..281 | 1..282 | 878 | 60.6 | Plus |
Dvir\GJ16181-PA | 1978 | GJ16181-PA | 59..256 | 71..265 | 219 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25137-PA | 292 | GK25137-PA | 1..284 | 1..276 | 810 | 55.9 | Plus |
Dwil\GK19083-PA | 250 | GK19083-PA | 59..237 | 88..265 | 165 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17406-PA | 285 | GE17406-PA | 1..285 | 1..284 | 1199 | 78.9 | Plus |