BDGP Sequence Production Resources |
Search the DGRC for LP04985
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 49 |
Well: | 85 |
Vector: | pOT2 |
Associated Gene/Transcript | mRpL20-RA |
Protein status: | LP04985.pep: gold |
Sequenced Size: | 591 |
Gene | Date | Evidence |
---|---|---|
mRpL20 | 2009-06-08 | Manual selection by Joe Carlson |
591 bp assembled on 2009-07-31
GenBank Submission: BT089020.1
> LP04985.complete TAACAAGTAGAGTCGTTGAGATCAATTAAAAATATATAAAAACTCGACCG ATATTCTGTTAATATCAAGCCATGGTCTTCCTGAACCTTCCCTTGCTGGT ACGGTCCCGTGGTCCGGACGAATTCTGGCGGAAGAGACGCATCTTCAAGC TGGCAGCGCATTATAGAAGCCGCACTCGCAATGTCTACTCCTTCGCCATC CGGAGTGTCCATAGGGCACTGGCCTATGCCACCAAGGGGCGAAAGCTAAA GAAACTGGACATGGCGCAACTGTGGAGCACACGCGTGGAGGCGGGTTGTC AGCAGTATGGAGTAGGTCTGGAAACCTTCAAAGAGGGCCTCGCGCGCTCC GATATTCTGCTCAACAAAAAAGTCCTATCCGACCTCGCCATTTGGGAGCC GCGATCTTTTGAAGCTCTAGTAAAGATCTCTCGAGAGCGGGCAGCTGTGG AGGGAATGCCAGACATCAAACGGAGATCGGCATTTAACCAGGTCTATGGA CTGAGCAACCTGAAGTTGGATTAACATAGCCTTAAGTAGGAGTTCAAATA TAGATATTTGTATGTTTTAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpL20-RA | 686 | mRpL20-RA | 83..653 | 1..571 | 2855 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 13007700..13007909 | 367..158 | 1050 | 100 | Minus |
chr3L | 24539361 | chr3L | 13007445..13007645 | 568..368 | 1005 | 100 | Minus |
chr3L | 24539361 | chr3L | 13007972..13008129 | 158..1 | 790 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 13017404..13017613 | 367..158 | 1050 | 100 | Minus |
3L | 28110227 | 3L | 13017146..13017349 | 571..368 | 1020 | 100 | Minus |
3L | 28110227 | 3L | 13017676..13017833 | 158..1 | 790 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 13010504..13010713 | 367..158 | 1050 | 100 | Minus |
3L | 28103327 | 3L | 13010246..13010449 | 571..368 | 1020 | 100 | Minus |
3L | 28103327 | 3L | 13010776..13010933 | 158..1 | 790 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 13007972..13008129 | 1..158 | 100 | Minus | |
chr3L | 13007445..13007645 | 368..568 | 100 | <- | Minus |
chr3L | 13007700..13007908 | 159..367 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL20-RA | 1..453 | 72..524 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL20-RA | 1..453 | 72..524 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL20-RA | 1..453 | 72..524 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL20-RA | 1..453 | 72..524 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL20-RA | 1..568 | 1..568 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL20-RA | 1..568 | 1..568 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL20-RA | 35..602 | 1..568 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL20-RA | 35..602 | 1..568 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 13017149..13017349 | 368..568 | 100 | <- | Minus |
3L | 13017404..13017612 | 159..367 | 100 | <- | Minus |
3L | 13017676..13017833 | 1..158 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 13017149..13017349 | 368..568 | 100 | <- | Minus |
3L | 13017404..13017612 | 159..367 | 100 | <- | Minus |
3L | 13017676..13017833 | 1..158 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 13017149..13017349 | 368..568 | 100 | <- | Minus |
3L | 13017404..13017612 | 159..367 | 100 | <- | Minus |
3L | 13017676..13017833 | 1..158 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 13010249..13010449 | 368..568 | 100 | <- | Minus |
arm_3L | 13010504..13010712 | 159..367 | 100 | <- | Minus |
arm_3L | 13010776..13010933 | 1..158 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 13010249..13010449 | 368..568 | 100 | <- | Minus |
3L | 13010504..13010712 | 159..367 | 100 | <- | Minus |
3L | 13010776..13010933 | 1..158 | 100 | Minus |
Translation from 71 to 523
> LP04985.pep MVFLNLPLLVRSRGPDEFWRKRRIFKLAAHYRSRTRNVYSFAIRSVHRAL AYATKGRKLKKLDMAQLWSTRVEAGCQQYGVGLETFKEGLARSDILLNKK VLSDLAIWEPRSFEALVKISRERAAVEGMPDIKRRSAFNQVYGLSNLKLD *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25175-PA | 150 | GF25175-PA | 1..150 | 1..150 | 752 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13788-PA | 150 | GG13788-PA | 1..150 | 1..150 | 780 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14480-PA | 150 | GH14480-PA | 1..150 | 1..150 | 746 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpL20-PA | 150 | CG11258-PA | 1..150 | 1..150 | 762 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13635-PA | 150 | GI13635-PA | 1..150 | 1..150 | 739 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24871-PA | 150 | GL24871-PA | 1..150 | 1..150 | 749 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10871-PA | 150 | GA10871-PA | 1..150 | 1..150 | 749 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24614-PA | 150 | GM24614-PA | 1..150 | 1..150 | 784 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12681-PA | 150 | GD12681-PA | 1..150 | 1..150 | 783 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13973-PA | 150 | GJ13973-PA | 1..150 | 1..150 | 747 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16834-PA | 150 | GK16834-PA | 1..150 | 1..150 | 729 | 90 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20081-PA | 150 | GE20081-PA | 1..150 | 1..150 | 775 | 98 | Plus |
Translation from 71 to 523
> LP04985.hyp MVFLNLPLLVRSRGPDEFWRKRRIFKLAAHYRSRTRNVYSFAIRSVHRAL AYATKGRKLKKLDMAQLWSTRVEAGCQQYGVGLETFKEGLARSDILLNKK VLSDLAIWEPRSFEALVKISRERAAVEGMPDIKRRSAFNQVYGLSNLKLD *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpL20-PA | 150 | CG11258-PA | 1..150 | 1..150 | 762 | 100 | Plus |