BDGP Sequence Production Resources |
Search the DGRC for LP05025
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 50 |
Well: | 25 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5347-RA |
Protein status: | LP05025.pep: gold |
Preliminary Size: | 962 |
Sequenced Size: | 1245 |
Gene | Date | Evidence |
---|---|---|
CG5347 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5347 | 2002-05-30 | Blastp of sequenced clone |
CG5347 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5347 | 2008-04-29 | Release 5.5 accounting |
CG5347 | 2008-08-15 | Release 5.9 accounting |
CG5347 | 2008-12-18 | 5.12 accounting |
1245 bp (1245 high quality bases) assembled on 2002-05-30
GenBank Submission: AY118346
> LP05025.complete AAATTGTTCAAAAATTTTACACGAAAAAAAGTATATTTTTTTTTAAATTT TACAACGCTATTTAAAAACCAAAAAATAAAGTTCTCAAAAATACTTTCAT CATAATGTCGTATCGCCGTAGTCAAACAATCTGTCGCTTCCATTTGCTTG GAATTTGTCGTTTTGGTGATTTATGCCGATTCTCGCACGACGAGACGACA CCAAATGACAACCAGAGTCCGCAGATATCGGAAATCGCGGATGAAGTCGT GGAGAATGAGCAAGTGGTGGCCTCCACCAGTAGCTACAGTCGCCAGATGA CCTGGGCAAATGCACCAGAGTTTGTTCCCAGGTACAAAGCCAATTCTGCC GATTTCCAAGCAACTGAAGGTGTCCAGGATATTTGTCCATATGGTGGCAG CTGTATCTGGGGCAGTAAGTGCTCGTATCCACTTCACATGGAGATTTGCA AGATGTGCGACCTTTACTGCCTCCACCCGATGGATCAGAACCAACGCCGT GCGCACAATCGTGAGTGTCTGGAGCAGCACGAGCAGGCGATGGAGCTATC TTTTGCAATAGCCAGATCCAAGGACAAGATGTGCGGCATTTGTTTCGATA CCGTCGTGGAGAAGAAGGGACGTGAACGTCGCTTTGGCATCTTGTCCAAG TGCAAGCACATATTCTGTTTGACGTGCATTCGCACATGGCGTCAGGCCCA TCAATTTGAGGCCACTGTGACGCGTGGTTGCCCCGAATGTCGCGTCTTTT CGGAATTCGTGTGCCCTAGTGCCTACTGGGTGGATACAAAGGAGGAGAAG GACAAGTTGCTAAGCGAATATCGCGCGGCAATGGGCGCCAAGGATTGCAA GTACTTCAATGGGGGCTTGGGCAAATGTCCCTTTGGAAACAAGTGCTTCT ACAGGCACCATCGTCGTTGTGACGATAACCAGACACAATCAAATGCCGTC AATTCAGACTGATGGCTATGACAATATGACTATTGATTTTAATGAAATAC CATTCATGGCATTTGACCGATCGACTGAATTTCAATTTGATCGATCAATT TCTCAGTGACTCGAGCGATACGTCCATTTCAAAGAAAATCAAAGAGAACA AAGCAACTTTTGTTAGACGGCTGAGGAGACACGGTTTATAGACTTAGTCT TGGTCCTTGCCAGAGACTATAATGTACAACACTGAGCTTAATATAGCTTC GTTCATCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5347-RA | 1210 | CG5347-RA | 1..1208 | 1..1208 | 6040 | 100 | Plus |
CG5334-RA | 760 | CG5334-RA | 200..568 | 535..903 | 1425 | 92.4 | Plus |
Mkrn1-RB | 2173 | Mkrn1-RB | 697..1049 | 504..856 | 655 | 79 | Plus |
CG5334-RA | 760 | CG5334-RA | 684..760 | 1048..1124 | 355 | 97.4 | Plus |
CG5334-RA | 760 | CG5334-RA | 30..92 | 128..190 | 165 | 84.1 | Plus |
CG5334-RA | 760 | CG5334-RA | 102..151 | 203..252 | 145 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 14667070..14668277 | 1..1208 | 6040 | 100 | Plus |
chrX | 22417052 | chrX | 14665854..14666222 | 535..903 | 1425 | 92.4 | Plus |
chrX | 22417052 | chrX | 14666338..14666498 | 1048..1208 | 775 | 98.8 | Plus |
chr3L | 24539361 | chr3L | 21521288..21521565 | 710..433 | 460 | 77.7 | Minus |
chr3L | 24539361 | chr3L | 21520783..21520963 | 908..728 | 320 | 78.5 | Minus |
chr3L | 24539361 | chr3L | 18712268..18712510 | 803..561 | 270 | 74.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 14776774..14777981 | 1..1208 | 6040 | 100 | Plus |
X | 23542271 | X | 14775558..14775926 | 535..903 | 1425 | 92.4 | Plus |
X | 23542271 | X | 14776042..14776202 | 1048..1208 | 775 | 98.8 | Plus |
3L | 28110227 | 3L | 21532353..21532630 | 710..433 | 460 | 77.7 | Minus |
3L | 28110227 | 3L | 21531848..21532028 | 908..728 | 320 | 78.5 | Minus |
3L | 28110227 | 3L | 18722609..18722851 | 803..561 | 270 | 74.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 14784872..14786079 | 1..1208 | 6040 | 100 | Plus |
X | 23527363 | X | 14783656..14784024 | 535..903 | 1425 | 92.4 | Plus |
X | 23527363 | X | 14784140..14784300 | 1048..1208 | 775 | 98.7 | Plus |
3L | 28103327 | 3L | 21525453..21525659 | 710..504 | 435 | 80.6 | Minus |
3L | 28103327 | 3L | 21525000..21525128 | 856..728 | 255 | 79.8 | Minus |
3L | 28103327 | 3L | 18715814..18715951 | 698..561 | 240 | 78.2 | Minus |
X | 23527363 | X | 14783486..14783548 | 128..190 | 165 | 84.1 | Plus |
X | 23527363 | X | 14783342..14783385 | 1..44 | 145 | 88.6 | Plus |
X | 23527363 | X | 14783558..14783607 | 203..252 | 145 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Transpac | 5249 | Transpac 5249bp Derived from AF222049 (AF222049.1) (Rel. 62, Last updated, Version 1). | 3785..3867 | 78..2 | 121 | 66.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 14667070..14668279 | 1..1210 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5347-RA | 1..858 | 105..962 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5347-RA | 1..858 | 105..962 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5347-RA | 1..858 | 105..962 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5347-RA | 1..858 | 105..962 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5347-RA | 1..858 | 105..962 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5347-RA | 1..1210 | 1..1210 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5347-RA | 1..1210 | 1..1210 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5347-RA | 1..1210 | 1..1210 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5347-RA | 1..1210 | 1..1210 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5347-RA | 1..1210 | 1..1210 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 14776774..14777983 | 1..1210 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 14776774..14777983 | 1..1210 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 14776774..14777983 | 1..1210 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 14670807..14672016 | 1..1210 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 14784872..14786081 | 1..1210 | 99 | Plus |
Translation from 104 to 961
> LP05025.pep MSYRRSQTICRFHLLGICRFGDLCRFSHDETTPNDNQSPQISEIADEVVE NEQVVASTSSYSRQMTWANAPEFVPRYKANSADFQATEGVQDICPYGGSC IWGSKCSYPLHMEICKMCDLYCLHPMDQNQRRAHNRECLEQHEQAMELSF AIARSKDKMCGICFDTVVEKKGRERRFGILSKCKHIFCLTCIRTWRQAHQ FEATVTRGCPECRVFSEFVCPSAYWVDTKEEKDKLLSEYRAAMGAKDCKY FNGGLGKCPFGNKCFYRHHRRCDDNQTQSNAVNSD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10705-PA | 396 | GF10705-PA | 15..334 | 1..268 | 888 | 54.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17851-PA | 290 | GG17851-PA | 1..290 | 1..285 | 1175 | 76.6 | Plus |
Dere\GG13225-PA | 378 | GG13225-PA | 14..314 | 1..268 | 830 | 54.6 | Plus |
Dere\GG15726-PA | 285 | GG15726-PA | 10..209 | 43..268 | 490 | 46 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14787-PA | 386 | GH14787-PA | 22..324 | 5..268 | 864 | 55.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5347-PA | 285 | CG5347-PA | 1..285 | 1..285 | 1588 | 100 | Plus |
Mkrn1-PC | 386 | CG7184-PC | 14..322 | 1..268 | 901 | 56.6 | Plus |
Mkrn1-PB | 386 | CG7184-PB | 14..322 | 1..268 | 901 | 56.6 | Plus |
Mkrn1-PA | 386 | CG7184-PA | 14..322 | 1..268 | 901 | 56.6 | Plus |
CG5334-PA | 210 | CG5334-PA | 67..208 | 144..285 | 611 | 76.1 | Plus |
CG12477-PA | 265 | CG12477-PA | 18..208 | 55..268 | 438 | 43.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11841-PA | 391 | GI11841-PA | 18..329 | 5..268 | 847 | 54.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11888-PA | 185 | GL11888-PA | 1..123 | 146..268 | 542 | 78.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20164-PA | 367 | GA20164-PA | 14..305 | 1..268 | 880 | 57.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12045-PA | 289 | GM12045-PA | 1..289 | 1..285 | 1329 | 84.8 | Plus |
Dsec\GM22131-PA | 386 | GM22131-PA | 14..322 | 1..268 | 862 | 55.9 | Plus |
Dsec\GM12044-PA | 212 | GM12044-PA | 61..195 | 140..274 | 535 | 73.3 | Plus |
Dsec\GM14923-PA | 266 | GM14923-PA | 91..208 | 151..268 | 441 | 63.6 | Plus |
Dsec\GM12044-PA | 212 | GM12044-PA | 3..106 | 2..108 | 177 | 45.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12110-PA | 386 | GD12110-PA | 14..322 | 1..268 | 862 | 55.9 | Plus |
Dsim\GD12329-PA | 259 | GD12329-PA | 88..205 | 151..268 | 443 | 63.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13540-PA | 390 | GJ13540-PA | 18..328 | 5..268 | 855 | 54.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20382-PA | 394 | GK20382-PA | 19..332 | 1..268 | 870 | 55.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17153-PA | 293 | GE17153-PA | 1..293 | 1..285 | 1161 | 74.7 | Plus |
Dyak\GE22322-PA | 382 | GE22322-PA | 14..318 | 1..268 | 867 | 56.2 | Plus |
Dyak\GE22057-PA | 269 | GE22057-PA | 10..210 | 47..268 | 456 | 42.3 | Plus |
Translation from 104 to 961
> LP05025.hyp MSYRRSQTICRFHLLGICRFGDLCRFSHDETTPNDNQSPQISEIADEVVE NEQVVASTSSYSRQMTWANAPEFVPRYKANSADFQATEGVQDICPYGGSC IWGSKCSYPLHMEICKMCDLYCLHPMDQNQRRAHNRECLEQHEQAMELSF AIARSKDKMCGICFDTVVEKKGRERRFGILSKCKHIFCLTCIRTWRQAHQ FEATVTRGCPECRVFSEFVCPSAYWVDTKEEKDKLLSEYRAAMGAKDCKY FNGGLGKCPFGNKCFYRHHRRCDDNQTQSNAVNSD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5347-PA | 285 | CG5347-PA | 1..285 | 1..285 | 1588 | 100 | Plus |
Mkrn1-PC | 386 | CG7184-PC | 14..322 | 1..268 | 901 | 56.6 | Plus |
Mkrn1-PB | 386 | CG7184-PB | 14..322 | 1..268 | 901 | 56.6 | Plus |
Mkrn1-PA | 386 | CG7184-PA | 14..322 | 1..268 | 901 | 56.6 | Plus |
CG5334-PA | 210 | CG5334-PA | 67..208 | 144..285 | 611 | 76.1 | Plus |