Clone LP05795 Report

Search the DGRC for LP05795

Clone and Library Details

Library:LP
Tissue Source:Drosophila melanogaster larval-early pupal
Created by:Ling Hong
Date Registered:1998-06-11
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:57
Well:95
Vector:pOT2
Associated Gene/TranscriptCG31274-RA
Protein status:LP05795.pep: wuzgold
Sequenced Size:1561

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG31274 2002-11-15 Blastp of sequenced clone
CG31274 2003-01-01 Sim4 clustering to Release 3
CG31274 2008-04-29 Release 5.5 accounting
CG31274 2008-08-15 Release 5.9 accounting
CG31274 2008-12-18 5.12 accounting

Clone Sequence Records

LP05795.complete Sequence

1561 bp (1561 high quality bases) assembled on 2002-11-15

GenBank Submission: BT003234

> LP05795.complete
CACAGACGTTGGACCAAAATAAATACCATCCGACGGAGTCCCGATCCCGA
TTGGAAAACACCAAGAATAGGAGCTGCTGCCAGTTATGTAGATCTACGCC
GTTATGTCTGGAACATCGACCTCTGAACGCTCCAACTCCGAAGACAGGTA
GTAGATAGGCATTCAAAAATCCATGTAATGACCAAAATATCCCGCTTCCA
GCCCGTTGAATCCCTGCCTAACGGAGGTCCTCAGGAATTGTGCCAACATT
CAGTCGCTGGAGAGCTTGAACTACGAATATAACGACGTTTTGCTGACCGA
AGACAACGTGGGGAAGATGATTACGCCGAATCCGTATTCCTTTAGTGGCA
ACATTTCCATCAGCAGTTGTCCAAGTGAAGATGTATCATTTTCGGAAAGC
ATCCTAGAGGACAACGGACGCATTTCGCTGGCCTATGAGAACCTGAAGAC
AATTCCGCGGCGACTGGCCGACAAATTCGCAGCGCAGACCAAGTTTCTCG
ATTTGAGTCACAATGATTTCCGAAACTTGAGATTTCTCTCCTTTTTCGAG
GATCTGGACACTTTAATCCTGGACCGCAACGTAAACCTGGACATAAACAC
TTTTCCTTATTTGCCGAGCTTAAGGATCTTGTGGATCAACAATTGCGATA
TAGCAAATATAACCGATTGGATACACCGCATCGAACGGCACTGTCCTGCG
CTGGATCAGCTCTCTTGCATGGGGAATCCTGGCATCCGCACAGTTTTCGG
GGGCCAAGGACCCCGCGAGTATATACTACAGGTGCTTCCCCAGCTAAAAT
ATCTCGATGGACTTCCAACCAGCAGGAATGCAGCTTATGCGACGCTGTCT
TCCTCACAAGGACAGGGTCCGGACTCCACGAGCAATTCGGAAAAGCCTCC
ACTCGCATCCGCATTCACTTTCAAGGACATCATCCGTCCAAAGTATTCCA
GAAAATCGCACAGCGGACGGATGTTTGGCAACGGCTCCTCCACAAACTGA
AGTAATATGCCGAAGGAGGGAGGGGTATTCCACTGATTGCATTCTGTCCC
ATTGTTGGACTATTTTTAACCGTCCGCTGGATTATCAGCGCTGCCCTCGC
TGCCCTGCAGTCGTCGATTGCACCTACAGTGCTATGCAAGTAAATATGCA
TATGGTTATTGCCATGTACGTATATAAATTTGCAATTGTATGACGATGGA
CACGCACAAACCTAGTGAGAATTAATCTAGTGCATTAAAGCAATTTTTAC
AATAATAAGAGTCAATGACCTCAGCGAATAGTCAAGTATACAATAGGCAC
CATCTTCAGAATAAATGTTCTTCGACTTATTCTGAATGTCGTTCAGTGCC
CGATTAATTTTACGGATGTAAGCACATGGGCACGAGTTAATATTGCTTAA
AACTTGAGGCCAAAGATTAAAAGTATGATTCAAAGCAGTTCATTGCGTTT
AATCTAAATTTATTACAGGACTATTTTTGCCTACCTCAATAATAAATGTT
TTAAATTATCCGGTTTCAATGCCGTCAACAATACTAGACCACCAAAAAAA
AAAAAAAAAAA

LP05795.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:33:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG31274-RA 1550 CG31274-RA 1..1548 1..1548 7740 100 Plus
CG31274-RB 1496 CG31274-RB 145..1494 199..1548 6750 100 Plus
MESK4-RA 1591 MESK4-RA 354..1590 199..1435 6170 99.9 Plus
CG31274-RB 1496 CG31274-RB 1..147 1..147 735 100 Plus
MESK4-RA 1591 MESK4-RA 210..356 1..147 735 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 20:47:06
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 12818216..12819126 633..1543 4540 99.9 Plus
chr3R 27901430 chr3R 12814004..12814877 633..1502 4260 99.4 Plus
chr3R 27901430 chr3R 12817520..12818153 1..634 3170 100 Plus
chr3R 27901430 chr3R 12813308..12813941 1..634 3155 99.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:50:33 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 20:47:04
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16993730..16994645 633..1548 4580 100 Plus
3R 32079331 3R 16989518..16990391 633..1502 4260 99.4 Plus
3R 32079331 3R 16993034..16993667 1..634 3170 100 Plus
3R 32079331 3R 16988822..16989455 1..634 3155 99.8 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:08:22
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 16734561..16735476 633..1548 4580 100 Plus
3R 31820162 3R 16730349..16731222 633..1502 4270 99.4 Plus
3R 31820162 3R 16733865..16734498 1..634 3170 100 Plus
3R 31820162 3R 16729653..16730286 1..634 3155 99.8 Plus
3R 31820162 3R 16731221..16731255 1514..1548 175 100 Plus
Blast to na_te.dros performed on 2019-03-16 20:47:05 has no hits.

LP05795.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 20:47:44 Download gff for LP05795.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 12817520..12818152 1..633 100 -> Plus
chr3R 12818217..12819126 634..1543 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:36:55 Download gff for LP05795.complete
Subject Subject Range Query Range Percent Splice Strand
CG31274-RB 35..843 192..1000 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:04:10 Download gff for LP05795.complete
Subject Subject Range Query Range Percent Splice Strand
MESK4-RA 35..843 192..1000 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:28:35 Download gff for LP05795.complete
Subject Subject Range Query Range Percent Splice Strand
MESK4-RA 35..843 192..1000 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:54:25 Download gff for LP05795.complete
Subject Subject Range Query Range Percent Splice Strand
CG31274-RB 35..843 192..1000 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:54:09 Download gff for LP05795.complete
Subject Subject Range Query Range Percent Splice Strand
MESK4-RA 35..843 192..1000 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:23:06 Download gff for LP05795.complete
Subject Subject Range Query Range Percent Splice Strand
CG31274-RA 1..1543 1..1543 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:04:09 Download gff for LP05795.complete
Subject Subject Range Query Range Percent Splice Strand
CG31274-RA 1..1543 1..1543 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:28:35 Download gff for LP05795.complete
Subject Subject Range Query Range Percent Splice Strand
CG31274-RA 19..1561 1..1543 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:54:25 Download gff for LP05795.complete
Subject Subject Range Query Range Percent Splice Strand
CG31274-RA 1..1543 1..1543 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:54:09 Download gff for LP05795.complete
Subject Subject Range Query Range Percent Splice Strand
MESK4-RB 9..152 1..144 100 == Plus
MESK4-RB 153..1460 199..1502 99 == Plus
MESK4-RB 1461..1488 1516..1543 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:47:44 Download gff for LP05795.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16993034..16993666 1..633 100 -> Plus
3R 16993731..16994640 634..1543 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:47:44 Download gff for LP05795.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16993034..16993666 1..633 100 -> Plus
3R 16993731..16994640 634..1543 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:47:44 Download gff for LP05795.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16993034..16993666 1..633 100 -> Plus
3R 16993731..16994640 634..1543 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:28:35 Download gff for LP05795.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12818756..12819388 1..633 100 -> Plus
arm_3R 12819453..12820362 634..1543 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:26:40 Download gff for LP05795.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16733865..16734497 1..633 100 -> Plus
3R 16734562..16735471 634..1543 100   Plus

LP05795.pep Sequence

Translation from 316 to 999

> LP05795.pep
MITPNPYSFSGNISISSCPSEDVSFSESILEDNGRISLAYENLKTIPRRL
ADKFAAQTKFLDLSHNDFRNLRFLSFFEDLDTLILDRNVNLDINTFPYLP
SLRILWINNCDIANITDWIHRIERHCPALDQLSCMGNPGIRTVFGGQGPR
EYILQVLPQLKYLDGLPTSRNAAYATLSSSQGQGPDSTSNSEKPPLASAF
TFKDIIRPKYSRKSHSGRMFGNGSSTN*

LP05795.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 22:53:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17073-PA 283 GF17073-PA 54..283 1..227 1001 82.6 Plus
Dana\GF22965-PA 184 GF22965-PA 8..167 31..176 176 34.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 22:53:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21851-PA 280 GG21851-PA 54..280 1..227 1131 93.4 Plus
Dere\GG21862-PA 280 GG21862-PA 54..280 1..227 1126 93 Plus
Dere\GG11070-PA 290 GG11070-PA 54..258 1..205 1031 94.1 Plus
Dere\GG12157-PA 182 GG12157-PA 7..165 32..176 155 30 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 22:53:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19551-PA 299 GH19551-PA 65..299 7..227 739 64.4 Plus
Dgri\GH18964-PA 187 GH18964-PA 2..180 27..188 168 30.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:12:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG31274-PB 280 CG31274-PB 54..280 1..227 1193 100 Plus
MESK4-PB 280 CG31447-PB 54..280 1..227 1193 100 Plus
MESK4-PA 280 CG31447-PA 54..280 1..227 1193 100 Plus
CG31076-PB 182 CG31076-PB 7..153 32..164 162 32.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 22:53:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23847-PA 306 GI23847-PA 58..299 1..216 703 58.8 Plus
Dmoj\GI23294-PA 187 GI23294-PA 3..168 29..176 164 32.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 22:53:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24541-PA 295 GL24541-PA 51..295 1..227 761 65.3 Plus
Dper\GL23629-PA 181 GL23629-PA 2..165 27..176 154 30.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 22:53:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16142-PA 295 GA16142-PA 51..295 1..227 755 65.5 Plus
Dpse\GA22495-PA 181 GA22495-PA 2..165 27..176 153 30.3 Plus
Dpse\GA26671-PA 181 GA26671-PA 2..165 27..176 153 30.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 22:53:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15193-PA 280 GM15193-PA 54..280 1..227 1126 93.8 Plus
Dsec\GM22064-PA 280 GM22064-PA 54..280 1..227 1126 93.8 Plus
Dsec\GM15189-PA 325 GM15189-PA 99..325 1..227 1124 93.8 Plus
Dsec\GM16199-PA 196 GM16199-PA 1..196 32..227 982 94.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 22:53:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19125-PA 280 GD19125-PA 54..280 1..227 1148 95.2 Plus
Dsim\GD19124-PA 280 GD19124-PA 54..280 1..227 1146 95.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 22:53:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10561-PA 310 GJ10561-PA 61..310 1..227 731 60.8 Plus
Dvir\GJ24148-PA 187 GJ24148-PA 2..180 28..191 166 31.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 22:53:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14506-PA 298 GK14506-PA 57..298 1..227 766 65.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 22:53:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24595-PA 280 GE24595-PA 54..280 1..227 1136 93.4 Plus
Dyak\GE10602-PA 182 GE10602-PA 7..173 32..184 159 30.4 Plus

LP05795.hyp Sequence

Translation from 316 to 999

> LP05795.hyp
MITPNPYSFSGNISISSCPSEDVSFSESILEDNGRISLAYENLKTIPRRL
ADKFAAQTKFLDLSHNDFRNLRFLSFFEDLDTLILDRNVNLDINTFPYLP
SLRILWINNCDIANITDWIHRIERHCPALDQLSCMGNPGIRTVFGGQGPR
EYILQVLPQLKYLDGLPTSRNAAYATLSSSQGQGPDSTSNSEKPPLASAF
TFKDIIRPKYSRKSHSGRMFGNGSSTN*

LP05795.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:53:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG31274-PB 280 CG31274-PB 54..280 1..227 1193 100 Plus
MESK4-PB 280 CG31447-PB 54..280 1..227 1193 100 Plus
MESK4-PA 280 CG31447-PA 54..280 1..227 1193 100 Plus
CG31076-PB 182 CG31076-PB 7..153 32..164 162 32.4 Plus