LP05915.complete Sequence
5610 bp (5610 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061546
> LP05915.complete
CGGACGTGAGCATGTATTTCTGTTTGAGTGTGTGTGAGTGTTAGTGTTTG
TGTAAGAAGTTCGGCGGCAACGAAAACGTAAAATAGTGAAGCATAAAGGC
ACAAAGTGAAGAAATACTCGCACATAAACCGATGTTAGTGTGTTTGTCTA
AGCCCTTCTACCTCTTTTTTTGCTACCTGCCAATTTGTTAACTTTATTGT
TGCTACCGCTTGCGTGCCGTGAATCAAAGTAACAACAACCGCCACAACAA
CAACATGCACAAATAAATGTAAGTGTGTAAGTGACCGTGGAGCGATTTAA
TAACAGTGCAAAGCCAGGAATAGCAACTAAAATCTGTTTTTAAACGCGCG
ACGAATGAGTTTAAAATCGATTGCAGCTCGCAAAAATTGGTCAACATCAC
AAATAGTAGAATGCACCACACAATGCCCTTTAGTTATATACCATGTACAT
GTAGATGTATCATATCCCGTGACTCATCCGATTTGCTTTTGCATATGCAA
TCTCTACGCAAATTACTTGGGTGACCAAAAGAAAACTATTAATAAGTTGC
GTTGAAGATAACATAATTGTCGAGCGAAAATATCATAAATCATGGCGAGA
ATATTTAATAATTTATTGCTCTAACAATTAGGCTCTCATATAATAACTTA
TGATTAAATACAAATAATTCAATTAGATTGTGCTGCTCACCCCATACCCC
TTCAAAATAAAAGATTAGCAAAATTATGAATGAAAACGTAAATATAAGAA
ATAATAATAAAGCTAGGGGTGCATTGTACATATAAAGTATTATTTTGAAG
AATTATTTCCTTTATGTTTCGTAACATTCGACCACCACCTTTTCTGCCAC
TACTTTCTACTGACGCCTACCCAAATTTTGCCAATTCTTCACAATGTCTG
CAATGCTAAGAATTTTAATAAAATGCAATGAGCACTCGGTTGAGAATAAT
TTAAATTTAGCCACGCGCCTTTCTGGCCCACTGACAACTCTCGCCAGCCA
AGTGTTCGTCGAAAAAGTCATTAACCTCGGTGATTTGGATTCGAATGTTG
TCGTCAGTCTAGAATCAGTGTAACAAATATTGAATGTTATGCTAATGGGA
ATGATAATAATGGTGGCCAAGTCCGCAAACATGACCGATATATTTGACTT
TGTAGGTCAACGATGTTGACGCTGAAATTCTGATCTGCAAATATTGCAAT
CCTTATATAAAACCCAGAGAAGAGGTCAGTTATCGCGAAGCCAGCGCATC
GAACAGTTTGCTCAATAAACAATTGTCTGCGACAAAGGAATCAGCAAAAT
GTCACTGCGTTGATATATAGGGTTGATATTAGGGTTGATATATATCCAAG
AAGGGTTCGGCAGGGCAGTACCCTGTATTGAAGAGGAAGGGTAAACCTTC
GAACACAACGATTTGAAATAAGCAAAAATGGAAACAATAAATAATGATCC
GCCATTGTTGCTTTAGGCATCAGTAAATTATTTACTGCGATCATTTCTTA
TAGCTGCGGTCAAGATATTAGCTACAAATGCGTTTGAATACATGAAAAAA
ACAGTGTCGATAAAATATTTTCCCTTAACAATACTCAAACAAAAAGGGTT
AACTCTTTATTTATTTAACGTACACAACTAATCTTTTGTCCGCTTCTGTT
TACTTGCTTAGTTCGTTTATACTCGTATATATACGATAAATTAGCTTATT
TGGTTTATACCTACTATATATACAGTTGAAAGTCTCGGTCCTATCGCATT
TCTCTTTGTTTACCCAGAATTTAAAACGCTTGCTATTTCAGCGACAAGCG
ATCACAAGGGAGTGATAAATCAATAGACTTTAGAAAATCTTATTTAAAAT
ATAATAAAATAAACCCTTAAAAACGATGAGTTACCTTGACTGGACTAATC
AAACCCGAACTAGTAGTTAGCAAACTACGTCACTTTATTGTTTTTTTATT
TTTTTTTTTTGAAGGTTTATACTCATGAGAGAAATAAATCAAATCGAACA
CGAGCATACACAGAGAAGAATATATTATATGTTTTATATTACGATAAATA
TAATGATCTTAACTTTATTGGGATTAATATTGCAAATACATTACATTATT
CTATATTGTATTGCTGCAATACTAAAATACTATGATTATTATATAATTTG
CTCTTGTGTATAATTTTACGATCGCTCTGCAAACCTATAGCGATACCCTC
TAGAGTAAACAGACCGATTCATGATGTCATGTTCGCCGCACCAGAAAGGC
CGGGATCACATGGCACATGGTCGGAATGGTCTTGGTAATATAATTTAAGC
TCGGAGCCGAGTTCGCGGCGTGATTTTAGATCATTAGCTCACCGGTTAGC
AGAAATTCTCGCATTTTTCAGTCTCTCTTTTAGGACGGAAATTCATTATT
TTATATGTATATGGAGAAAAGCTAACTAAATGAGCTCATCTTGGTATCAA
TATATAATGTACTTCCCCGAAGAATTCAATATCTAAACGGCATGTGTAAC
TTTGAGCTTGTTTGCTTGGGTAATTGATATCTAATCGTTGGAAGCTGACC
CCCAGAGACACCTCTCGAAATCAAATGGAGACCGCCCAAACACTCAAACG
CTGACTTTGACATCGCCCACACGCAAAGTTGAGTGTATTTTAGCTCAGCG
CGTTTTCAGATACATTTTATATACACAGAAGTATCTGAACATGCATCGGG
GTTTATGTGGCATCGTCCATATAAATTGCGGCAATTAATATAATCTACCC
GAAGCTGTTGCATTTCTGTTAAATGTTAAATGCATTTCAATTGTTTTCCG
TGCCGCGAGTTTCCTTCACCGGTTTCCTCGCATGTCTAATTGTGAAAAAT
ATCGATTTTAGAATTTCAAATTGCATTATTGTACAGGTTGTGAAAGCCCT
GTCTCCGATTCCTCGTACTGCCATGAGTGATTGCTCTGTAATTACATAAC
CCCGTGCTCTATAAAAAAAAAATGTGTGTTCTATCTCATTTCATTTCAGG
TGAAGAGTGGAACTTTCATTTTCGACAAACAACAATGTGTGAGACGCGAT
AAGACAGTCGGAAAGAAGAACAGCAATCTCAGCTATAAAAGAGCACTATA
AACAAACTAAATTGGAGGTGGAATTAAAATAGGAGAGAACAATGACAATT
ACGTACACAGGTGAAGTGGCCACTTGTCGCGGCTTTGGCTGTTTTCTCAA
ATTGCTGCTCAGATGGCGAGGAAGCATTTACAAACTGGTTTGGCTAGATC
TTCTGGCCTTCTTGACCATTTACTATGCGATCAACATGGTGTATCGCTTT
GGCCTCAACCCCGCACAAAAAGAAACCTTTGAGGCCATTGTTCAGTACTG
TGATAGTTACAGAGAACTCATACCCCTGTCCTTCGTGCTTGGTTTCTATG
TATCGATTGTGATGACCCGTTGGTGGAATCAGTACACCTCCATTCCCTGG
CCAGATCCCATCGCCGTGTTTGTCAGCTCGAATGTCCATGGCCAGGATGA
GCGAGGACGCATGATGAGGCGAACAATAATGCGATATGTGTGCCTTTGCC
TGACGATGGTCCTGGCGAATGTTTCGCCGAGGGTGAAGAAGCGTTTCCCC
GGCCTAAATAATCTGGTGGAAGCGGGTCTGCTAAATGACAATGAAAAGAC
CATCATCGAGACCATGAACAAGGCCTTTCCCAGACCTTCGAAGCACTGGC
TGCCCATCGTTTGGGCTGCCAGTATTATAACCAGGGCCAGAAAGGAAGGT
CGCATTCGTGATGATTTTGCTGTGAAGACCATCATCGATGAGCTAAATAA
GTTTCGTGGTCAGTGTGGACTCCTCATCAGCTACGATACCATTAGTGTAC
CTCTGGTGTACACCCAAGTGGTGACCCTGGCGGTGTATTCGTACTTCCTT
ACCTGCTGCATGGGTCAACAATGGACCGATGGCAAGGTGGTGGGCAATAC
CACATACCTGAACAAGGTGGATCTATACTTTCCTGTATTTACAACGCTGC
AGTTCTTCTTCTACATGGGTTGGCTCAAGGTGGCCGAGTCGCTGATAAAT
CCATTTGGCGAAGACGATGATGATTTTGAGGTCAACTGGATGGTGGATCG
CAATCTTCAGGTGTCCTATCTGATCGTCGACGAGATGCACCATGACCATC
CGGAGCTGTTAAAGGATCAGTACTGGGACGAGGTGTTCCCCAACGAGCTG
CCCTACACAATAGCTGCCGAACGATTCCGGGAGAATCATCCAGAGCCGTC
CACTGCCAAGATCGAGGTGCCCAAGAATGCGGCCATGCCATCGACAATGT
CGTCCGTTCGCATCGATGAAATGGCCGATGATGCCAGTGGCATTCACTTC
TCAGCTGGAAATGGCAAAATGCGCCTGGATTCCTCGCCCTCGCTGGTGAG
CGTTTCGGGAACTCTATCCCGGGTGAATACGGTGGCCTCGGCCCTCAAAC
GTTTCCTGAGCCGCGACGATAGCAGGCCGGGATCGGCAACGCCCAGTCAG
GATCAGCCCTACAAATTCCCGGCCAGCGCCAGCTCGGCGAGTTTATCGGG
TGCCGTGGTAGGATCGGCTACATCGGCCGGAAAACCAGCTGGCAGTCTTA
GGATTACGCAGCAAGTGATCGAGGAGGTGGACGAACAGGCGACCATAACA
TCCATGAGAGCCAATGATCCACGTCCCAATGTCATGGACATATTCGCACA
AACCTCGTCGGGAGCTGGAACCTCTGGACCGCTGCAGCCACCACCGGCCC
ACTCGGAACCGGTGGACATCCCGTCACGTCCGCCCTCATACAATCGGGCC
CAATCCCAGTACGAACCCAACCTATTTCCACCTGGCGGAGTGGATGCACT
GCTCAGTACTTCAGCTCCTGCGGGCGGAAGTCCCCTGCTCCTGTCTAATG
CAGCCACTGCACCCAGTTCGCCAGTGGGCGAGAGCTCCAAGTCCCTATAC
GATCCACAAAAGGGCGCCAGCCGAGAGACAGTGGAGAGCATGGACCTGAG
GTCCTCCACGGATCTACTCGGCGATGCGGCAGTGCAGCCCGAAGACGAGG
GCGATGACTTCGATAAGCTGAAGGCGGAACGCGAGAAGGAGAAACTGATG
CGACAGCAAAAGAATCTGGCCAGAACTATTAGCACCGCTCCGGGAATGGA
AGCCACGGCTGTGCCGATGGTGCCAATGGTCCCAGTGAACGTGGCAGTGC
AACAGGCACAGCTGCAACCAGTTGCATCCAGTGCCGATCTTCTGGCCGGC
GGAGATCAGTTCTCCAATTCGACGATGAAATCGGAGGACGCCATCAACGG
CAGTTGAAGGACACCTAGTATTTTGTTTCGTACACTTACCTAGTTTAAGT
CTAGTGCATTATTTAGTTCCCTAAGCTGATAAGCTAAATTACCTATACTA
TATTCTAGACGTATATGCCGCTGACATATACTGGACATACGCAAATTAAC
GGACAGTTTAAGAATGCTCATAATGTCTAAAACGAGCTCGAGTGATGATG
GACCTAATTAACGCAGTTAATAACACAAATACTAATATCTAAGTAGAAAG
TTTTTGAATTTTACAAATATAAGTTATTTTGTAAATTGAAAAAAAAAAAA
AAAAAAAAAA
LP05915.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 20:47:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Best1-RA | 3144 | Best1-RA | 316..2905 | 3000..5589 | 12950 | 100 | Plus |
| Best1.a | 3312 | Best1.a | 295..1619 | 3000..4324 | 6625 | 100 | Plus |
| Best1-RB | 3288 | Best1-RB | 316..1640 | 3000..4324 | 6625 | 100 | Plus |
| Best1-RB | 3288 | Best1-RB | 1783..3049 | 4323..5589 | 6335 | 100 | Plus |
| Best1.a | 3312 | Best1.a | 1762..2420 | 4323..4981 | 3295 | 100 | Plus |
| Best1.a | 3312 | Best1.a | 2465..3073 | 4981..5589 | 3045 | 100 | Plus |
| Best1.a | 3312 | Best1.a | 27..296 | 1..270 | 1350 | 100 | Plus |
| Best1-RB | 3288 | Best1-RB | 48..317 | 1..270 | 1350 | 100 | Plus |
| Best1-RA | 3144 | Best1-RA | 48..317 | 1..270 | 1350 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:14:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chr3R | 27901430 | chr3R | 5992998..5996208 | 3212..1 | 15935 | 99.8 | Minus |
| chr3R | 27901430 | chr3R | 5990768..5991526 | 4082..3324 | 3750 | 99.6 | Minus |
| chr3R | 27901430 | chr3R | 5988950..5989608 | 4981..4323 | 3295 | 100 | Minus |
| chr3R | 27901430 | chr3R | 5987455..5988064 | 5588..4979 | 3050 | 100 | Minus |
| chr3R | 27901430 | chr3R | 5990469..5990714 | 4324..4079 | 1230 | 100 | Minus |
| chr3R | 27901430 | chr3R | 5991873..5991987 | 3323..3209 | 575 | 100 | Minus |
| chr3L | 24539361 | chr3L | 15291575..15291769 | 4191..3997 | 330 | 77.9 | Minus |
| chr3L | 24539361 | chr3L | 15290004..15290086 | 4000..4082 | 235 | 85.5 | Plus |
| chr3L | 24539361 | chr3L | 15292008..15292111 | 3800..3697 | 220 | 80.8 | Minus |
| chr3L | 24539361 | chr3L | 6243136..6243227 | 4089..3998 | 205 | 81.5 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:50:37 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:14:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10167249..10170459 | 3212..1 | 16010 | 100 | Minus |
| 3R | 32079331 | 3R | 10165017..10165775 | 4082..3324 | 3795 | 100 | Minus |
| 3R | 32079331 | 3R | 10163199..10163857 | 4981..4323 | 3295 | 100 | Minus |
| 3R | 32079331 | 3R | 10161703..10162313 | 5589..4979 | 3055 | 100 | Minus |
| 3R | 32079331 | 3R | 10164718..10164963 | 4324..4079 | 1230 | 100 | Minus |
| 3R | 32079331 | 3R | 10166124..10166238 | 3323..3209 | 575 | 100 | Minus |
| 3L | 28110227 | 3L | 15301523..15301717 | 4191..3997 | 330 | 77.9 | Minus |
| 3L | 28110227 | 3L | 15299952..15300034 | 4000..4082 | 235 | 85.5 | Plus |
| 3L | 28110227 | 3L | 15301956..15302059 | 3800..3697 | 220 | 80.8 | Minus |
| 3L | 28110227 | 3L | 6250631..6250722 | 4089..3998 | 205 | 81.5 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:07:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 31820162 | 3R | 9908080..9911290 | 3212..1 | 16020 | 99.9 | Minus |
| 3R | 31820162 | 3R | 9905848..9906606 | 4082..3324 | 3795 | 100 | Minus |
| 3R | 31820162 | 3R | 9904030..9904688 | 4981..4323 | 3295 | 100 | Minus |
| 3R | 31820162 | 3R | 9902534..9903144 | 5589..4979 | 3055 | 100 | Minus |
| 3R | 31820162 | 3R | 9905549..9905794 | 4324..4079 | 1230 | 100 | Minus |
| 3R | 31820162 | 3R | 9906955..9907069 | 3323..3209 | 575 | 100 | Minus |
| 3L | 28103327 | 3L | 15294623..15294817 | 4191..3997 | 330 | 77.9 | Minus |
| 3L | 28103327 | 3L | 15293052..15293134 | 4000..4082 | 235 | 85.5 | Plus |
| 3L | 28103327 | 3L | 15295056..15295159 | 3800..3697 | 220 | 80.7 | Minus |
| 3L | 28103327 | 3L | 6243731..6243822 | 4089..3998 | 205 | 81.5 | Minus |
| 3L | 28103327 | 3L | 18834510..18834569 | 310..249 | 195 | 90.3 | Minus |
| 3L | 28103327 | 3L | 15292701..15292787 | 3640..3726 | 180 | 80.4 | Plus |
| 3L | 28103327 | 3L | 15293227..15293335 | 4082..4190 | 170 | 77 | Plus |
| 3L | 28103327 | 3L | 6241791..6241875 | 4205..4121 | 155 | 78.8 | Minus |
Blast to na_te.dros performed 2019-03-15 16:14:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 6826..6993 | 1978..2148 | 136 | 56.6 | Plus |
| Stalker4 | 7359 | Stalker4 STALKER4 7359bp | 3507..3629 | 2008..2132 | 133 | 60.6 | Plus |
| Stalker | 7256 | Stalker STALKER 7256bp | 3401..3523 | 2008..2132 | 133 | 60.6 | Plus |
LP05915.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:15:39 Download gff for
LP05915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chr3R | 5990470..5990712 | 4081..4323 | 100 | <- | Minus |
| chr3R | 5987455..5988061 | 4982..5588 | 100 | <- | Minus |
| chr3R | 5988950..5989607 | 4324..4981 | 100 | <- | Minus |
| chr3R | 5990770..5991526 | 3324..4080 | 99 | <- | Minus |
| chr3R | 5991873..5991983 | 3213..3323 | 100 | <- | Minus |
| chr3R | 5992998..5996208 | 1..3212 | 97 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:37:06 Download gff for
LP05915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Best1-RA | 1..2166 | 3142..5307 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:42:33 Download gff for
LP05915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Best1-RA | 1..2166 | 3142..5307 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:57:06 Download gff for
LP05915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Best1-RA | 1..2166 | 3142..5307 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:21:03 Download gff for
LP05915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Best1-RA | 1..2166 | 3142..5307 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:30:39 Download gff for
LP05915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Best1-RA | 1..2166 | 3142..5307 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed on 2008-11-11 00:49:09 has no hits.
Sim4 to dmel-all-transcript-r5.32.fasta performed on 2011-03-16 20:42:32 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 01:57:06 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 17:33:09 Download gff for
LP05915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Best1-RA | 27..294 | 1..268 | 100 | == | Plus |
| Best1-RA | 295..2883 | 3000..5588 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-26 21:30:39 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:15:39 Download gff for
LP05915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10161704..10162310 | 4982..5588 | 100 | <- | Minus |
| 3R | 10163199..10163856 | 4324..4981 | 100 | <- | Minus |
| 3R | 10164719..10164961 | 4081..4323 | 100 | <- | Minus |
| 3R | 10165019..10165775 | 3324..4080 | 100 | <- | Minus |
| 3R | 10166124..10166234 | 3213..3323 | 100 | <- | Minus |
| 3R | 10167249..10170459 | 1..3212 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:15:39 Download gff for
LP05915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10161704..10162310 | 4982..5588 | 100 | <- | Minus |
| 3R | 10163199..10163856 | 4324..4981 | 100 | <- | Minus |
| 3R | 10164719..10164961 | 4081..4323 | 100 | <- | Minus |
| 3R | 10165019..10165775 | 3324..4080 | 100 | <- | Minus |
| 3R | 10166124..10166234 | 3213..3323 | 100 | <- | Minus |
| 3R | 10167249..10170459 | 1..3212 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:15:39 Download gff for
LP05915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10161704..10162310 | 4982..5588 | 100 | <- | Minus |
| 3R | 10163199..10163856 | 4324..4981 | 100 | <- | Minus |
| 3R | 10164719..10164961 | 4081..4323 | 100 | <- | Minus |
| 3R | 10165019..10165775 | 3324..4080 | 100 | <- | Minus |
| 3R | 10166124..10166234 | 3213..3323 | 100 | <- | Minus |
| 3R | 10167249..10170459 | 1..3212 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:57:06 Download gff for
LP05915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5987426..5988032 | 4982..5588 | 100 | <- | Minus |
| arm_3R | 5988921..5989578 | 4324..4981 | 100 | <- | Minus |
| arm_3R | 5990441..5990683 | 4081..4323 | 100 | <- | Minus |
| arm_3R | 5990741..5991497 | 3324..4080 | 100 | <- | Minus |
| arm_3R | 5991846..5991956 | 3213..3323 | 100 | <- | Minus |
| arm_3R | 5992971..5996181 | 1..3212 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:56:04 Download gff for
LP05915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9905550..9905792 | 4081..4323 | 100 | <- | Minus |
| 3R | 9902535..9903141 | 4982..5588 | 100 | <- | Minus |
| 3R | 9904030..9904687 | 4324..4981 | 100 | <- | Minus |
| 3R | 9905850..9906606 | 3324..4080 | 100 | <- | Minus |
| 3R | 9906955..9907065 | 3213..3323 | 100 | <- | Minus |
| 3R | 9908080..9911290 | 1..3212 | 99 | | Minus |
LP05915.pep Sequence
Translation from 3141 to 5306
> LP05915.pep
MTITYTGEVATCRGFGCFLKLLLRWRGSIYKLVWLDLLAFLTIYYAINMV
YRFGLNPAQKETFEAIVQYCDSYRELIPLSFVLGFYVSIVMTRWWNQYTS
IPWPDPIAVFVSSNVHGQDERGRMMRRTIMRYVCLCLTMVLANVSPRVKK
RFPGLNNLVEAGLLNDNEKTIIETMNKAFPRPSKHWLPIVWAASIITRAR
KEGRIRDDFAVKTIIDELNKFRGQCGLLISYDTISVPLVYTQVVTLAVYS
YFLTCCMGQQWTDGKVVGNTTYLNKVDLYFPVFTTLQFFFYMGWLKVAES
LINPFGEDDDDFEVNWMVDRNLQVSYLIVDEMHHDHPELLKDQYWDEVFP
NELPYTIAAERFRENHPEPSTAKIEVPKNAAMPSTMSSVRIDEMADDASG
IHFSAGNGKMRLDSSPSLVSVSGTLSRVNTVASALKRFLSRDDSRPGSAT
PSQDQPYKFPASASSASLSGAVVGSATSAGKPAGSLRITQQVIEEVDEQA
TITSMRANDPRPNVMDIFAQTSSGAGTSGPLQPPPAHSEPVDIPSRPPSY
NRAQSQYEPNLFPPGGVDALLSTSAPAGGSPLLLSNAATAPSSPVGESSK
SLYDPQKGASRETVESMDLRSSTDLLGDAAVQPEDEGDDFDKLKAEREKE
KLMRQQKNLARTISTAPGMEATAVPMVPMVPVNVAVQQAQLQPVASSADL
LAGGDQFSNSTMKSEDAINGS*
LP05915.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 22:25:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dana\GF17535-PA | 722 | GF17535-PA | 1..722 | 1..721 | 3455 | 89.6 | Plus |
| Dana\GF10734-PA | 526 | GF10734-PA | 1..376 | 1..379 | 1434 | 65.2 | Plus |
| Dana\GF23693-PA | 540 | GF23693-PA | 18..370 | 18..375 | 1319 | 64.8 | Plus |
| Dana\GF10904-PA | 815 | GF10904-PA | 1..384 | 1..382 | 1153 | 52.7 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 22:25:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dere\GG17296-PA | 769 | GG17296-PA | 1..769 | 1..721 | 3638 | 90.8 | Plus |
| Dere\GG13553-PA | 537 | GG13553-PA | 1..387 | 1..392 | 1445 | 63.8 | Plus |
| Dere\GG15891-PA | 526 | GG15891-PA | 1..424 | 1..422 | 1305 | 56.4 | Plus |
| Dere\GG14064-PA | 809 | GG14064-PA | 1..384 | 1..382 | 1149 | 52.2 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 22:25:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dgri\Rfp1-PA | 779 | GH18459-PA | 1..779 | 1..721 | 2908 | 74.5 | Plus |
| Dgri\GH17028-PA | 561 | GH17028-PA | 1..374 | 1..378 | 1409 | 66.1 | Plus |
| Dgri\GH17026-PA | 535 | GH17026-PA | 1..370 | 1..378 | 1350 | 63.2 | Plus |
| Dgri\GH16281-PA | 818 | GH16281-PA | 1..384 | 1..382 | 1154 | 52.5 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:28:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Best1-PA | 721 | CG6264-PA | 1..721 | 1..721 | 3743 | 100 | Plus |
| Best1-PD | 736 | CG6264-PD | 1..736 | 1..721 | 3717 | 98 | Plus |
| Best1-PB | 769 | CG6264-PB | 1..769 | 1..721 | 3684 | 93.8 | Plus |
| Best1-PC | 784 | CG6264-PC | 1..784 | 1..721 | 3658 | 92 | Plus |
| Best3-PA | 535 | CG12327-PA | 1..387 | 1..392 | 1389 | 64 | Plus |
| Best4-PB | 526 | CG7259-PB | 1..424 | 1..422 | 1277 | 55.9 | Plus |
| Best2-PA | 809 | CG10173-PA | 1..384 | 1..382 | 1098 | 52.2 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 22:25:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmoj\GI24037-PA | 782 | GI24037-PA | 1..782 | 1..721 | 3002 | 75.4 | Plus |
| Dmoj\GI12230-PA | 541 | GI12230-PA | 1..370 | 1..378 | 1366 | 64.3 | Plus |
| Dmoj\GI12232-PA | 510 | GI12232-PA | 1..370 | 1..374 | 1354 | 65.2 | Plus |
| Dmoj\GI13224-PA | 803 | GI13224-PA | 1..359 | 1..382 | 1076 | 50 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 22:25:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dper\GL25692-PA | 514 | GL25692-PA | 1..371 | 1..375 | 1354 | 64.8 | Plus |
| Dper\GL22521-PA | 783 | GL22521-PA | 4..309 | 72..382 | 793 | 47.9 | Plus |
| Dper\GL25671-PA | 215 | GL25671-PA | 1..203 | 1..203 | 748 | 63.5 | Plus |
| Dper\GL23840-PA | 215 | GL23840-PA | 22..138 | 278..394 | 626 | 97.4 | Plus |
| Dper\GL22521-PA | 783 | GL22521-PA | 1..48 | 1..48 | 176 | 56.2 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 22:25:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dpse\GA19476-PB | 721 | GA19476-PB | 1..720 | 1..717 | 3301 | 88.1 | Plus |
| Dpse\GA19476-PA | 765 | GA19476-PA | 1..764 | 1..717 | 3246 | 83 | Plus |
| Dpse\GA11558-PA | 522 | GA11558-PA | 1..376 | 1..378 | 1456 | 66.1 | Plus |
| Dpse\GA20216-PA | 514 | GA20216-PA | 1..371 | 1..375 | 1353 | 64.8 | Plus |
| Dpse\GA24547-PA | 841 | GA24547-PA | 1..384 | 1..382 | 1150 | 52.7 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 22:25:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsec\GM26180-PA | 767 | GM26180-PA | 1..767 | 1..721 | 3778 | 93.1 | Plus |
| Dsec\GM24494-PA | 533 | GM24494-PA | 1..387 | 1..392 | 1445 | 63.5 | Plus |
| Dsec\GM25520-PA | 526 | GM25520-PA | 1..424 | 1..422 | 1328 | 55.9 | Plus |
| Dsec\GM13845-PA | 809 | GM13845-PA | 1..384 | 1..382 | 1147 | 52.2 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 22:25:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsim\GD20729-PA | 417 | GD20729-PA | 1..417 | 305..721 | 2135 | 97.6 | Plus |
| Dsim\GD12566-PA | 533 | GD12566-PA | 1..387 | 1..392 | 1443 | 63.5 | Plus |
| Dsim\GD14535-PA | 526 | GD14535-PA | 1..424 | 1..422 | 1330 | 56.2 | Plus |
| Dsim\GD13131-PA | 809 | GD13131-PA | 1..384 | 1..382 | 1151 | 52.5 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 22:25:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\GJ23667-PA | 780 | GJ23667-PA | 1..780 | 1..721 | 3056 | 76.4 | Plus |
| Dvir\GJ11462-PA | 556 | GJ11462-PA | 1..378 | 1..378 | 1380 | 64.5 | Plus |
| Dvir\GJ11464-PA | 530 | GJ11464-PA | 1..386 | 1..388 | 1322 | 64.6 | Plus |
| Dvir\GJ11999-PA | 822 | GJ11999-PA | 1..384 | 1..382 | 1158 | 53.2 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 22:25:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dwil\GK22536-PA | 744 | GK22536-PA | 1..744 | 1..721 | 3137 | 81.9 | Plus |
| Dwil\GK20484-PA | 564 | GK20484-PA | 1..385 | 1..388 | 1428 | 63.1 | Plus |
| Dwil\GK20485-PA | 464 | GK20485-PA | 1..373 | 1..378 | 1305 | 63.6 | Plus |
| Dwil\GK13577-PA | 838 | GK13577-PA | 1..381 | 1..381 | 1145 | 52.3 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 22:25:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\GE24699-PA | 769 | GE24699-PA | 1..769 | 1..721 | 3705 | 92.5 | Plus |
| Dyak\GE19853-PA | 535 | GE19853-PA | 1..387 | 1..392 | 1443 | 64 | Plus |
| Dyak\GE22233-PA | 526 | GE22233-PA | 1..424 | 1..422 | 1306 | 55.9 | Plus |
| Dyak\GE20488-PA | 809 | GE20488-PA | 1..384 | 1..382 | 1146 | 52.2 | Plus |
LP05915.hyp Sequence
Translation from 3141 to 5306
> LP05915.hyp
MTITYTGEVATCRGFGCFLKLLLRWRGSIYKLVWLDLLAFLTIYYAINMV
YRFGLNPAQKETFEAIVQYCDSYRELIPLSFVLGFYVSIVMTRWWNQYTS
IPWPDPIAVFVSSNVHGQDERGRMMRRTIMRYVCLCLTMVLANVSPRVKK
RFPGLNNLVEAGLLNDNEKTIIETMNKAFPRPSKHWLPIVWAASIITRAR
KEGRIRDDFAVKTIIDELNKFRGQCGLLISYDTISVPLVYTQVVTLAVYS
YFLTCCMGQQWTDGKVVGNTTYLNKVDLYFPVFTTLQFFFYMGWLKVAES
LINPFGEDDDDFEVNWMVDRNLQVSYLIVDEMHHDHPELLKDQYWDEVFP
NELPYTIAAERFRENHPEPSTAKIEVPKNAAMPSTMSSVRIDEMADDASG
IHFSAGNGKMRLDSSPSLVSVSGTLSRVNTVASALKRFLSRDDSRPGSAT
PSQDQPYKFPASASSASLSGAVVGSATSAGKPAGSLRITQQVIEEVDEQA
TITSMRANDPRPNVMDIFAQTSSGAGTSGPLQPPPAHSEPVDIPSRPPSY
NRAQSQYEPNLFPPGGVDALLSTSAPAGGSPLLLSNAATAPSSPVGESSK
SLYDPQKGASRETVESMDLRSSTDLLGDAAVQPEDEGDDFDKLKAEREKE
KLMRQQKNLARTISTAPGMEATAVPMVPMVPVNVAVQQAQLQPVASSADL
LAGGDQFSNSTMKSEDAINGS*
LP05915.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:47:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Best1-PA | 721 | CG6264-PA | 1..721 | 1..721 | 3743 | 100 | Plus |
| Best1-PD | 736 | CG6264-PD | 1..736 | 1..721 | 3717 | 98 | Plus |
| Best1-PB | 769 | CG6264-PB | 1..769 | 1..721 | 3684 | 93.8 | Plus |
| Best1-PC | 784 | CG6264-PC | 1..784 | 1..721 | 3658 | 92 | Plus |
| Best3-PA | 535 | CG12327-PA | 1..387 | 1..392 | 1389 | 64 | Plus |
