BDGP Sequence Production Resources |
Search the DGRC for LP06072
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 60 |
Well: | 72 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5770-RA |
Protein status: | LP06072.pep: gold |
Preliminary Size: | 1044 |
Sequenced Size: | 915 |
Gene | Date | Evidence |
---|---|---|
CG5770 | 2001-01-01 | Release 2 assignment |
CG5770 | 2002-01-03 | Blastp of sequenced clone |
CG5770 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5770 | 2008-04-29 | Release 5.5 accounting |
CG5770 | 2008-08-15 | Release 5.9 accounting |
CG5770 | 2008-12-18 | 5.12 accounting |
915 bp (915 high quality bases) assembled on 2002-01-03
GenBank Submission: AY075434
> LP06072.complete GAATAACCGTCAACATGAATATTCTGTGCACCGTGCTTATCTTCGCCAGC GTTTTGGCGGCCAACGCCAAGCCCAATAACCAGATCCAGAGTGCCTTGGA TCAGTATTTGGTGCATGCTCGCAGTCTGGATACATTTGTTTCCGAGGATA TGACCACGCAGTGCTTCAACTTATACATGCCTATGCTGAATCAAGTGGCT GCCACTTTCTCGAGTTCCTATCAGGACTGCATCACCACCGCCAATGCCCA GATCGCCAATTTGACCGCCCAGGCGGAGCAGCAGCAGAAGACCTATCAGT CCGACGTTTCAACACTCTGCAGTGCCTTTACCGCCTGCGACAGCAACAAT GATACCGCAAACTTCTTCAACTGCTACGCGAATGCTGCTGATAATGACGT CTCTGTGATCTACAACCTGGCCAGCAACGCTGCCAGCTCGGCCACCTCCT TCAGCTCGGGCATCCAAGCCATCCAGGACACCGAGTACCAGTGCACCAAC ACAACGCAGAACAACTACGTCCGGGATACAGCTGCCACCTACGATCTGCT GGACAATTGCCTCAAGAATGGAGTGCCCACCACTACCGCCACATCCTCAT CAGCCGCCCCTCAAACTACCTCTACCACAGACGGGGGTTTCCTATTTGGC CTTTGAGTAGTTAGCATTCGAAACTTTAACATATTCTAATCCATAAAAAC TTGTATCGTTCAGTAATTTTTTAAACCAAACAAAAGAAAACAAATAATTC AATTATATTGCCAAATTCACAGTAGCTTGGTTTTATACTGCAGACATCGC CAATTGAAATCTTAACATAATCAATTTTGTTTCAGATGAAATTTTAAAAA CGAAGTGATCAGTGAAATAAAGTCGCATTGGTTTCAGTCGTTTAGTTAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5770-RA | 1057 | CG5770-RA | 67..964 | 1..898 | 4490 | 100 | Plus |
CG5770.a | 1253 | CG5770.a | 263..1160 | 1..898 | 4490 | 100 | Plus |
CG5767-RA | 1166 | CG5767-RA | 368..864 | 87..583 | 1195 | 82.6 | Plus |
CG5767-RA | 1166 | CG5767-RA | 281..352 | 6..77 | 240 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 13931189..13931699 | 897..387 | 2540 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 13931762..13932083 | 387..66 | 1535 | 98.4 | Minus |
chr2R | 21145070 | chr2R | 13934121..13934419 | 385..87 | 655 | 81.3 | Minus |
chr2R | 21145070 | chr2R | 13933742..13933930 | 583..395 | 510 | 84.7 | Minus |
chr2R | 21145070 | chr2R | 13932138..13932203 | 66..1 | 300 | 97 | Minus |
chr2R | 21145070 | chr2R | 13934510..13934570 | 66..6 | 185 | 86.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 18044045..18044556 | 898..387 | 2560 | 100 | Minus |
2R | 25286936 | 2R | 18044619..18044940 | 387..66 | 1610 | 100 | Minus |
2R | 25286936 | 2R | 18047002..18047300 | 385..87 | 670 | 81.6 | Minus |
2R | 25286936 | 2R | 18046623..18046811 | 583..395 | 540 | 85.7 | Minus |
2R | 25286936 | 2R | 18044995..18045060 | 66..1 | 330 | 100 | Minus |
2R | 25286936 | 2R | 18047391..18047451 | 66..6 | 185 | 86.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 18045244..18045755 | 898..387 | 2560 | 100 | Minus |
2R | 25260384 | 2R | 18045818..18046139 | 387..66 | 1610 | 100 | Minus |
2R | 25260384 | 2R | 18048201..18048499 | 385..87 | 670 | 81.6 | Minus |
2R | 25260384 | 2R | 18047822..18048010 | 583..395 | 540 | 85.7 | Minus |
2R | 25260384 | 2R | 18046194..18046259 | 66..1 | 330 | 100 | Minus |
2R | 25260384 | 2R | 18048590..18048650 | 66..6 | 185 | 86.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tabor | 7345 | Tabor TABOR 7345bp | 5148..5233 | 770..681 | 124 | 64.4 | Minus |
TAHRE | 10463 | TAHRE OSV 10463bp | 8489..8527 | 728..765 | 111 | 79.5 | Plus |
accord | 7404 | accord ACCORD 7404bp | 4905..4949 | 705..749 | 108 | 71.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 13931189..13931699 | 387..897 | 99 | <- | Minus |
chr2R | 13931763..13932083 | 66..386 | 98 | <- | Minus |
chr2R | 13932139..13932203 | 1..65 | 96 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5770-RA | 1..642 | 15..656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5770-RA | 1..642 | 15..656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5770-RA | 1..642 | 15..656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5770-RA | 1..642 | 15..656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5770-RA | 1..642 | 15..656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5770-RA | 1..897 | 1..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5770-RA | 1..897 | 1..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5770-RA | 16..912 | 1..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5770-RA | 1..897 | 1..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5770-RA | 14..910 | 1..897 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18044046..18044556 | 387..897 | 100 | <- | Minus |
2R | 18044620..18044940 | 66..386 | 100 | <- | Minus |
2R | 18044996..18045060 | 1..65 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18044046..18044556 | 387..897 | 100 | <- | Minus |
2R | 18044620..18044940 | 66..386 | 100 | <- | Minus |
2R | 18044996..18045060 | 1..65 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18044046..18044556 | 387..897 | 100 | <- | Minus |
2R | 18044620..18044940 | 66..386 | 100 | <- | Minus |
2R | 18044996..18045060 | 1..65 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 13931551..13932061 | 387..897 | 100 | <- | Minus |
arm_2R | 13932125..13932445 | 66..386 | 100 | <- | Minus |
arm_2R | 13932501..13932565 | 1..65 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18045245..18045755 | 387..897 | 100 | <- | Minus |
2R | 18045819..18046139 | 66..386 | 100 | <- | Minus |
2R | 18046195..18046259 | 1..65 | 100 | Minus |
Translation from 2 to 655
> LP06072.hyp ITVNMNILCTVLIFASVLAANAKPNNQIQSALDQYLVHARSLDTFVSEDM TTQCFNLYMPMLNQVAATFSSSYQDCITTANAQIANLTAQAEQQQKTYQS DVSTLCSAFTACDSNNDTANFFNCYANAADNDVSVIYNLASNAASSATSF SSGIQAIQDTEYQCTNTTQNNYVRDTAATYDLLDNCLKNGVPTTTATSSS AAPQTTSTTDGGFLFGL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5770-PA | 213 | CG5770-PA | 1..213 | 5..217 | 1091 | 100 | Plus |
CG5767-PA | 253 | CG5767-PA | 1..204 | 5..210 | 800 | 75 | Plus |
CG10911-PA | 359 | CG10911-PA | 5..207 | 8..210 | 259 | 26.2 | Plus |
CG34005-PC | 185 | CG34005-PC | 5..180 | 11..188 | 208 | 27.9 | Plus |
CG34005-PB | 185 | CG34005-PB | 5..180 | 11..188 | 208 | 27.9 | Plus |
Translation from 14 to 655
> LP06072.pep MNILCTVLIFASVLAANAKPNNQIQSALDQYLVHARSLDTFVSEDMTTQC FNLYMPMLNQVAATFSSSYQDCITTANAQIANLTAQAEQQQKTYQSDVST LCSAFTACDSNNDTANFFNCYANAADNDVSVIYNLASNAASSATSFSSGI QAIQDTEYQCTNTTQNNYVRDTAATYDLLDNCLKNGVPTTTATSSSAAPQ TTSTTDGGFLFGL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13211-PA | 249 | GF13211-PA | 1..199 | 1..197 | 728 | 71.9 | Plus |
Dana\GF13208-PA | 377 | GF13208-PA | 5..211 | 4..203 | 213 | 27.1 | Plus |
Dana\GF22881-PA | 228 | GF22881-PA | 57..201 | 47..192 | 185 | 29.5 | Plus |
Dana\GF11688-PA | 135 | GF11688-PA | 1..130 | 55..184 | 155 | 26.2 | Plus |
Dana\GF24864-PA | 250 | GF24864-PA | 61..194 | 50..183 | 146 | 24.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21002-PA | 211 | GG21002-PA | 1..211 | 1..213 | 853 | 85.9 | Plus |
Dere\GG21000-PA | 300 | GG21000-PA | 1..189 | 1..187 | 739 | 74.1 | Plus |
Dere\GG20997-PA | 383 | GG20997-PA | 5..199 | 1..198 | 233 | 26.3 | Plus |
Dere\GG21837-PA | 184 | GG21837-PA | 3..179 | 6..184 | 196 | 28.5 | Plus |
Dere\GG12013-PA | 233 | GG12013-PA | 17..203 | 8..191 | 180 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20454-PA | 246 | GH20454-PA | 1..210 | 1..203 | 633 | 61.1 | Plus |
Dgri\GH20448-PA | 278 | GH20448-PA | 5..192 | 4..193 | 224 | 25.8 | Plus |
Dgri\GH21443-PA | 174 | GH21443-PA | 27..173 | 47..193 | 202 | 30.6 | Plus |
Dgri\GH20451-PA | 184 | GH20451-PA | 17..173 | 45..201 | 194 | 25.5 | Plus |
Dgri\GH20449-PA | 205 | GH20449-PA | 38..194 | 45..201 | 184 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5770-PA | 213 | CG5770-PA | 1..213 | 1..213 | 1091 | 100 | Plus |
CG5767-PA | 253 | CG5767-PA | 1..204 | 1..206 | 800 | 75 | Plus |
CG10911-PA | 359 | CG10911-PA | 5..207 | 4..206 | 259 | 26.2 | Plus |
CG34005-PC | 185 | CG34005-PC | 5..180 | 7..184 | 208 | 27.9 | Plus |
CG34005-PB | 185 | CG34005-PB | 5..180 | 7..184 | 208 | 27.9 | Plus |
Muc55B-PB | 485 | CG5765-PB | 6..215 | 3..206 | 205 | 25.2 | Plus |
Muc55B-PA | 485 | CG5765-PA | 6..215 | 3..206 | 205 | 25.2 | Plus |
CG16762-PA | 254 | CG16762-PA | 41..227 | 25..206 | 204 | 26.7 | Plus |
CG11470-PB | 230 | CG11470-PB | 8..216 | 7..205 | 199 | 27.5 | Plus |
CG11470-PA | 230 | CG11470-PA | 8..216 | 7..205 | 199 | 27.5 | Plus |
CG10912-PA | 271 | CG10912-PA | 48..210 | 46..204 | 173 | 25.8 | Plus |
CG7567-PA | 211 | CG7567-PA | 6..205 | 2..196 | 163 | 22.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19281-PA | 230 | GI19281-PA | 1..205 | 1..204 | 605 | 60.5 | Plus |
Dmoj\GI20246-PA | 186 | GI20246-PA | 23..185 | 23..189 | 220 | 28.1 | Plus |
Dmoj\GI19278-PA | 253 | GI19278-PA | 49..203 | 50..202 | 213 | 29.7 | Plus |
Dmoj\GI24461-PA | 231 | GI24461-PA | 7..205 | 3..201 | 178 | 27.2 | Plus |
Dmoj\GI24462-PA | 213 | GI24462-PA | 8..212 | 6..211 | 174 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10543-PA | 256 | GL10543-PA | 1..198 | 1..199 | 679 | 66.8 | Plus |
Dper\GL11526-PA | 186 | GL11526-PA | 41..181 | 44..184 | 189 | 29.1 | Plus |
Dper\GL24611-PA | 258 | GL24611-PA | 65..198 | 50..183 | 174 | 26.9 | Plus |
Dper\GL10540-PA | 356 | GL10540-PA | 7..200 | 7..201 | 173 | 25.3 | Plus |
Dper\GL13587-PA | 220 | GL13587-PA | 50..208 | 47..206 | 170 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19113-PA | 256 | GA19113-PA | 1..198 | 1..199 | 672 | 66.3 | Plus |
Dpse\GA24760-PA | 186 | GA24760-PA | 41..181 | 44..184 | 187 | 29.1 | Plus |
Dpse\GA14134-PA | 258 | GA14134-PA | 65..198 | 50..183 | 174 | 26.9 | Plus |
Dpse\GA26834-PA | 218 | GA26834-PA | 50..213 | 47..209 | 162 | 26.1 | Plus |
Dpse\GA10635-PA | 372 | GA10635-PA | 7..200 | 7..201 | 158 | 24.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19935-PA | 212 | GM19935-PA | 1..212 | 1..213 | 934 | 93.4 | Plus |
Dsec\GM19934-PA | 253 | GM19934-PA | 1..189 | 1..187 | 724 | 76.2 | Plus |
Dsec\GM19931-PA | 366 | GM19931-PA | 5..197 | 4..196 | 221 | 27 | Plus |
Dsec\GM21839-PA | 189 | GM21839-PA | 22..186 | 19..185 | 181 | 29.8 | Plus |
Dsec\GM19932-PA | 377 | GM19932-PA | 56..215 | 50..207 | 176 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25424-PA | 212 | GD25424-PA | 1..212 | 1..213 | 1010 | 93.4 | Plus |
Dsim\GD25423-PA | 253 | GD25423-PA | 1..189 | 1..187 | 732 | 77.2 | Plus |
Dsim\GD25420-PA | 381 | GD25420-PA | 5..197 | 4..196 | 225 | 26 | Plus |
Dsim\GD11333-PA | 190 | GD11333-PA | 9..185 | 6..184 | 179 | 27.4 | Plus |
Dsim\GD17726-PA | 236 | GD17726-PA | 17..218 | 8..207 | 174 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22158-PA | 248 | GJ22158-PA | 1..203 | 1..202 | 634 | 66.3 | Plus |
Dvir\GJ22155-PA | 276 | GJ22155-PA | 1..187 | 1..188 | 232 | 28.6 | Plus |
Dvir\GJ20200-PA | 187 | GJ20200-PA | 13..177 | 32..184 | 191 | 29.1 | Plus |
Dvir\GJ10551-PA | 211 | GJ10551-PA | 18..201 | 10..196 | 182 | 28.4 | Plus |
Dvir\GJ16053-PA | 252 | GJ16053-PA | 59..196 | 50..187 | 165 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22063-PA | 185 | GK22063-PA | 1..133 | 57..189 | 500 | 76.7 | Plus |
Dwil\GK22059-PA | 340 | GK22059-PA | 5..184 | 4..189 | 208 | 28 | Plus |
Dwil\GK22242-PA | 168 | GK22242-PA | 25..163 | 47..185 | 196 | 28.1 | Plus |
Dwil\GK11180-PA | 229 | GK11180-PA | 55..203 | 44..191 | 153 | 27.3 | Plus |
Dwil\GK22061-PA | 670 | GK22061-PA | 15..209 | 9..202 | 151 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13945-PA | 211 | GE13945-PA | 1..211 | 1..213 | 806 | 85.9 | Plus |
Dyak\GE13943-PA | 274 | GE13943-PA | 1..189 | 1..187 | 748 | 74.6 | Plus |
Dyak\GE13940-PA | 406 | GE13940-PA | 5..189 | 4..188 | 213 | 23.4 | Plus |
Dyak\GE11916-PA | 184 | GE11916-PA | 3..179 | 6..184 | 187 | 27.4 | Plus |
Dyak\GE10449-PA | 225 | GE10449-PA | 28..199 | 19..187 | 170 | 30.9 | Plus |