BDGP Sequence Production Resources |
Search the DGRC for LP06554
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 65 |
Well: | 54 |
Vector: | pOT2 |
Associated Gene/Transcript | Cp1-RA |
Protein status: | LP06554.pep: gold |
Sequenced Size: | 1514 |
Gene | Date | Evidence |
---|---|---|
CG6692 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6692 | 2004-10-04 | Blastp of sequenced clone |
Cp1 | 2008-04-29 | Release 5.5 accounting |
Cp1 | 2008-08-15 | Release 5.9 accounting |
Cp1 | 2008-12-18 | 5.12 accounting |
1514 bp (1514 high quality bases) assembled on 2004-10-04
GenBank Submission: BT016071
> LP06554.complete GACTGGTCACTCTGTCGGAGATTTCTTGTTTAAACAATTTCTGCTGGTTT TCATTAAACAACGAAAGGTCTTTGGGACTGGATCATCAAGAGCGACTTGT TAAATACAATCGGTTGACTTGCACATTAGTGTTGTTTCAGCCAATTAAAA AGAGTGCAACAACAGTGATAAATCAGTGAATTTACTGCATTCCTTGCGAC GCAATTCCGAGTGATTCCAGAACAAATCACAATGCGCACAGCTGTTTTGC TGCCACTTTTGGCCCTGCTGGCGGTGGCTCAGGCCGTTTCCTTCGCCGAC GTGGTCATGGAGGAATGGCATACGTTCAAGCTGGAGCACCGCAAGAACTA TCAGGATGAAACCGAGGAGCGTTTCCGCCTCAAGATCTTCAATGAGAACA AGCACAAGATTGCCAAGCACAACCAGCGATTCGCCGAGGGCAAGGTGAGC TTCAAACTGGCGGTCAATAAGTACGCCGATTTGCTGCACCACGAATTCCG TCAGCTGATGAACGGCTTCAACTACACTCTGCACAAGCAACTGCGTGCCG CCGATGAAAGCTTCAAGGGAGTCACCTTCATCTCGCCGGCTCATGTGACG CTGCCCAAATCTGTGGACTGGCGCACCAAGGGAGCTGTGACCGCCGTCAA GGATCAGGGACACTGCGGCAGCTGCTGGGCCTTCTCCAGCACAGGCGCCC TCGAGGGTCAGCATTTCCGCAAGTCCGGTGTCCTCGTCTCGCTGTCCGAG CAGAATCTGGTCGATTGCTCCACCAAGTACGGCAACAATGGATGCAACGG CGGTCTCATGGACAATGCCTTCCGCTATATTAAGGATAATGGAGGCATCG ATACCGAGAAGTCCTATCCCTACGAGGCCATCGATGACTCGTGCCACTTT AACAAGGGCACAGTCGGAGCCACCGATCGTGGATTCACCGATATTCCCCA GGGTGATGAGAAGAAGATGGCCGAGGCTGTGGCCACCGTTGGTCCCGTTT CCGTCGCCATCGATGCCTCCCACGAGTCGTTCCAGTTCTACTCGGAGGGC GTCTACAACGAGCCGCAGTGTGATGCCCAGAATCTGGATCACGGTGTGCT GGTCGTTGGCTTCGGCACCGACGAGTCCGGCGAGGATTACTGGCTGGTGA AGAACTCGTGGGGCACCACCTGGGGCGACAAGGGCTTCATCAAGATGCTG CGCAACAAGGAGAACCAGTGCGGCATCGCTAGCGCCTCCAGCTATCCCCT GGTCTAGAGCAGAACTGATGTAGTTTAGCCCCAGCATTCATATGATATGA TTTAGAAAAGAAACAGAAAAGATACCAACGCAAGCATCTCAAAAATGAAC TTTAATAATTTAGCCCAACCTCATATTTAATGAACTAATTTTGTAATGGG TCCATTGTATTCGCGTTTCTCTGCCATCATGTATGATATAGGTGAACAAC AAATCTGTTGATGTTTGTAGAAAAATAAATAAAAATTATATAATTTTAAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cp1-RA | 1609 | Cp1-RA | 42..1543 | 1..1502 | 7510 | 100 | Plus |
Cp1-RC | 1379 | Cp1-RC | 84..1374 | 212..1502 | 6455 | 100 | Plus |
Cp1-RB | 1505 | Cp1-RB | 218..1500 | 220..1502 | 6415 | 100 | Plus |
Cp1-RB | 1505 | Cp1-RB | 6..219 | 1..214 | 1070 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 9854359..9855311 | 545..1497 | 4765 | 100 | Plus |
chr2R | 21145070 | chr2R | 9854083..9854299 | 329..545 | 1085 | 100 | Plus |
chr2R | 21145070 | chr2R | 9847994..9848206 | 1..213 | 1035 | 99.1 | Plus |
chr2R | 21145070 | chr2R | 9849548..9849665 | 213..330 | 575 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 13967029..13967986 | 545..1502 | 4790 | 100 | Plus |
2R | 25286936 | 2R | 13966753..13966969 | 329..545 | 1085 | 100 | Plus |
2R | 25286936 | 2R | 13960664..13960876 | 1..213 | 1065 | 100 | Plus |
2R | 25286936 | 2R | 13962219..13962336 | 213..330 | 590 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 13968228..13969185 | 545..1502 | 4790 | 100 | Plus |
2R | 25260384 | 2R | 13967952..13968168 | 329..545 | 1085 | 100 | Plus |
2R | 25260384 | 2R | 13961863..13962075 | 1..213 | 1065 | 100 | Plus |
2R | 25260384 | 2R | 13963418..13963535 | 213..330 | 590 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 6450..6519 | 1287..1358 | 129 | 68.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 9847994..9848206 | 1..213 | 99 | -> | Plus |
chr2R | 9849549..9849665 | 214..330 | 99 | -> | Plus |
chr2R | 9854085..9854299 | 331..545 | 100 | -> | Plus |
chr2R | 9854360..9855283 | 546..1469 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cp1-RC | 71..1116 | 212..1257 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cp1-RC | 71..1116 | 212..1257 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cp1-RC | 71..1116 | 212..1257 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cp1-RC | 71..1116 | 212..1257 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cp1-RC | 71..1116 | 212..1257 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cp1-RA | 6..1502 | 1..1497 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cp1-RA | 6..1502 | 1..1497 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cp1-RA | 1..1486 | 12..1497 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cp1-RA | 6..1502 | 1..1497 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cp1-RA | 1..1486 | 12..1497 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13966755..13966969 | 331..545 | 100 | -> | Plus |
2R | 13960664..13960876 | 1..213 | 100 | -> | Plus |
2R | 13962220..13962336 | 214..330 | 100 | -> | Plus |
2R | 13967030..13967981 | 546..1497 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13966755..13966969 | 331..545 | 100 | -> | Plus |
2R | 13960664..13960876 | 1..213 | 100 | -> | Plus |
2R | 13962220..13962336 | 214..330 | 100 | -> | Plus |
2R | 13967030..13967981 | 546..1497 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13966755..13966969 | 331..545 | 100 | -> | Plus |
2R | 13960664..13960876 | 1..213 | 100 | -> | Plus |
2R | 13962220..13962336 | 214..330 | 100 | -> | Plus |
2R | 13967030..13967981 | 546..1497 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 9848169..9848381 | 1..213 | 100 | -> | Plus |
arm_2R | 9849725..9849841 | 214..330 | 100 | -> | Plus |
arm_2R | 9854260..9854474 | 331..545 | 100 | -> | Plus |
arm_2R | 9854535..9855486 | 546..1497 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13967954..13968168 | 331..545 | 100 | -> | Plus |
2R | 13961863..13962075 | 1..213 | 100 | -> | Plus |
2R | 13963419..13963535 | 214..330 | 100 | -> | Plus |
2R | 13968229..13969180 | 546..1497 | 100 | Plus |
Translation from 231 to 1256
> LP06554.pep MRTAVLLPLLALLAVAQAVSFADVVMEEWHTFKLEHRKNYQDETEERFRL KIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFNYTL HKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWA FSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYI KDNGGIDTEKSYPYEAIDDSCHFNKGTVGATDRGFTDIPQGDEKKMAEAV ATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESG EDYWLVKNSWGTTWGDKGFIKMLRNKENQCGIASASSYPLV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13722-PA | 417 | GF13722-PA | 107..417 | 31..341 | 1590 | 92.6 | Plus |
Dana\GF17600-PA | 333 | GF17600-PA | 1..333 | 1..341 | 1066 | 57.9 | Plus |
Dana\GF17358-PA | 329 | GF17358-PA | 1..329 | 1..341 | 910 | 51.9 | Plus |
Dana\GF13714-PA | 352 | GF13714-PA | 9..352 | 1..341 | 619 | 39 | Plus |
Dana\GF13132-PA | 392 | GF13132-PA | 68..392 | 2..341 | 619 | 38.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20414-PA | 341 | GG20414-PA | 1..341 | 1..341 | 1810 | 96.5 | Plus |
Dere\GG20405-PA | 352 | GG20405-PA | 9..352 | 1..341 | 616 | 37.7 | Plus |
Dere\GG20691-PA | 378 | GG20691-PA | 53..378 | 14..341 | 615 | 39 | Plus |
Dere\GG11133-PA | 615 | GG11133-PA | 303..610 | 23..337 | 600 | 39.9 | Plus |
Dere\GG23942-PA | 338 | GG23942-PA | 35..338 | 28..341 | 588 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22826-PA | 340 | GH22826-PA | 1..340 | 1..341 | 1632 | 85.9 | Plus |
Dgri\GH20767-PA | 329 | GH20767-PA | 4..329 | 6..341 | 783 | 46.1 | Plus |
Dgri\GH21411-PA | 391 | GH21411-PA | 81..391 | 26..341 | 623 | 39.1 | Plus |
Dgri\GH23906-PA | 358 | GH23906-PA | 48..358 | 26..341 | 620 | 39.1 | Plus |
Dgri\GH21038-PA | 349 | GH21038-PA | 47..349 | 38..341 | 610 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cp1-PC | 371 | CG6692-PC | 31..371 | 1..341 | 1822 | 100 | Plus |
Cp1-PA | 341 | CG6692-PA | 1..341 | 1..341 | 1822 | 100 | Plus |
Cp1-PE | 338 | CG6692-PE | 31..338 | 34..341 | 1661 | 100 | Plus |
Cp1-PD | 249 | CG6692-PD | 1..249 | 93..341 | 1349 | 100 | Plus |
CG4847-PE | 390 | CG4847-PE | 79..390 | 26..341 | 621 | 41.7 | Plus |
CG4847-PC | 390 | CG4847-PC | 79..390 | 26..341 | 621 | 41.7 | Plus |
CG4847-PA | 390 | CG4847-PA | 79..390 | 26..341 | 621 | 41.7 | Plus |
CG4847-PD | 420 | CG4847-PD | 109..420 | 26..341 | 621 | 41.7 | Plus |
CG6347-PA | 352 | CG6347-PA | 15..352 | 7..341 | 617 | 39.8 | Plus |
CG11459-PB | 336 | CG11459-PB | 5..334 | 2..339 | 600 | 37.8 | Plus |
CG11459-PA | 336 | CG11459-PA | 5..334 | 2..339 | 600 | 37.8 | Plus |
26-29-p-PA | 549 | CG8947-PA | 241..546 | 25..338 | 593 | 41.6 | Plus |
CG5367-PA | 338 | CG5367-PA | 35..338 | 28..341 | 587 | 36.3 | Plus |
CG12163-PB | 475 | CG12163-PB | 163..470 | 23..337 | 583 | 39.3 | Plus |
CG12163-PA | 614 | CG12163-PA | 302..609 | 23..337 | 583 | 39.3 | Plus |
Swim-PA | 431 | CG3074-PA | 201..422 | 136..341 | 279 | 32.2 | Plus |
Swim-PB | 431 | CG3074-PB | 201..422 | 136..341 | 279 | 32.2 | Plus |
CG6337-PB | 340 | CG6337-PB | 27..336 | 28..339 | 227 | 26.1 | Plus |
CG6337-PA | 340 | CG6337-PA | 27..336 | 28..339 | 227 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21205-PA | 339 | GI21205-PA | 1..339 | 1..341 | 1667 | 88 | Plus |
Dmoj\GI20850-PA | 329 | GI20850-PA | 4..329 | 6..341 | 841 | 49.1 | Plus |
Dmoj\GI13676-PA | 324 | GI13676-PA | 1..324 | 1..341 | 755 | 43.9 | Plus |
Dmoj\GI18587-PA | 366 | GI18587-PA | 62..366 | 32..341 | 615 | 40.1 | Plus |
Dmoj\GI11630-PA | 547 | GI11630-PA | 239..544 | 25..338 | 604 | 42.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17172-PA | 341 | GL17172-PA | 1..341 | 1..341 | 1728 | 91.8 | Plus |
Dper\GL15686-PA | 323 | GL15686-PA | 1..323 | 1..341 | 708 | 42.6 | Plus |
Dper\GL11434-PA | 372 | GL11434-PA | 61..372 | 26..341 | 625 | 39.8 | Plus |
Dper\GL17477-PA | 353 | GL17477-PA | 9..353 | 1..341 | 624 | 38.6 | Plus |
Dper\GL24978-PA | 338 | GL24978-PA | 20..338 | 18..341 | 579 | 37.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25021-PA | 341 | GA25021-PA | 1..341 | 1..341 | 1728 | 91.8 | Plus |
Dpse\GA25021-PB | 319 | GA25021-PB | 11..319 | 33..341 | 1576 | 92.9 | Plus |
Dpse\GA23505-PA | 323 | GA23505-PA | 1..323 | 1..341 | 713 | 42.9 | Plus |
Dpse\GA24205-PA | 353 | GA24205-PA | 9..353 | 1..341 | 624 | 38.6 | Plus |
Dpse\GA18475-PA | 372 | GA18475-PA | 61..372 | 26..341 | 624 | 39.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21500-PA | 341 | GM21500-PA | 1..341 | 1..341 | 1839 | 99.1 | Plus |
Dsec\GM21493-PA | 352 | GM21493-PA | 9..352 | 1..341 | 635 | 39.1 | Plus |
Dsec\GM21790-PA | 382 | GM21790-PA | 71..382 | 26..341 | 627 | 41.1 | Plus |
Dsec\GM10853-PA | 336 | GM10853-PA | 8..336 | 5..341 | 578 | 37.1 | Plus |
Dsec\GM11735-PA | 338 | GM11735-PA | 35..338 | 28..341 | 577 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10995-PA | 341 | GD10995-PA | 1..341 | 1..341 | 1839 | 99.1 | Plus |
Dsim\GD10987-PA | 352 | GD10987-PA | 9..352 | 1..341 | 632 | 39.1 | Plus |
Dsim\GD11280-PA | 382 | GD11280-PA | 71..382 | 26..341 | 630 | 41.1 | Plus |
Dsim\GD19835-PA | 336 | GD19835-PA | 8..336 | 5..341 | 581 | 36.6 | Plus |
Dsim\GD22268-PA | 338 | GD22268-PA | 35..338 | 28..341 | 576 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20806-PA | 339 | GJ20806-PA | 3..339 | 5..341 | 1653 | 87.8 | Plus |
Dvir\GJ20585-PA | 333 | GJ20585-PA | 4..333 | 6..341 | 849 | 48.1 | Plus |
Dvir\GJ14012-PA | 327 | GJ14012-PA | 1..327 | 1..340 | 800 | 44.4 | Plus |
Dvir\GJ13554-PA | 331 | GJ13554-PA | 1..331 | 1..341 | 775 | 45.9 | Plus |
Dvir\GJ11310-PA | 328 | GJ11310-PA | 7..327 | 9..340 | 740 | 43.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19626-PA | 341 | GK19626-PA | 1..341 | 1..341 | 1580 | 81.8 | Plus |
Dwil\GK22909-PA | 370 | GK22909-PA | 59..370 | 26..341 | 604 | 39 | Plus |
Dwil\GK22908-PA | 381 | GK22908-PA | 71..381 | 26..341 | 595 | 39.3 | Plus |
Dwil\GK14287-PA | 610 | GK14287-PA | 297..609 | 23..341 | 585 | 37.5 | Plus |
Dwil\GK16790-PA | 549 | GK16790-PA | 245..546 | 29..338 | 579 | 41.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12574-PA | 341 | GE12574-PA | 1..341 | 1..341 | 1823 | 97.9 | Plus |
Dyak\GE12565-PA | 353 | GE12565-PA | 9..353 | 1..341 | 623 | 38.8 | Plus |
Dyak\GE11675-PA | 384 | GE11675-PA | 61..384 | 16..341 | 621 | 39.6 | Plus |
Dyak\GE25302-PA | 615 | GE25302-PA | 309..610 | 29..337 | 606 | 40.2 | Plus |
Dyak\GE26053-PA | 338 | GE26053-PA | 35..338 | 28..341 | 601 | 36.6 | Plus |
Translation from 231 to 1256
> LP06554.hyp MRTAVLLPLLALLAVAQAVSFADVVMEEWHTFKLEHRKNYQDETEERFRL KIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFNYTL HKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWA FSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYI KDNGGIDTEKSYPYEAIDDSCHFNKGTVGATDRGFTDIPQGDEKKMAEAV ATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESG EDYWLVKNSWGTTWGDKGFIKMLRNKENQCGIASASSYPLV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cp1-PA | 341 | CG6692-PA | 1..341 | 1..341 | 1822 | 100 | Plus |
Cp1-PC | 371 | CG6692-PC | 31..371 | 1..341 | 1822 | 100 | Plus |
Cp1-PE | 338 | CG6692-PE | 31..338 | 34..341 | 1661 | 100 | Plus |
Cp1-PD | 249 | CG6692-PD | 1..249 | 93..341 | 1349 | 100 | Plus |
CG4847-PE | 390 | CG4847-PE | 79..390 | 26..341 | 621 | 41.7 | Plus |