Clone LP07057 Report

Search the DGRC for LP07057

Clone and Library Details

Library:LP
Tissue Source:Drosophila melanogaster larval-early pupal
Created by:Ling Hong
Date Registered:1998-06-11
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:70
Well:57
Vector:pOT2
Associated Gene/Transcriptfwd-RA
Protein status:LP07057.pep: gold
Preliminary Size:5116
Sequenced Size:6341

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7004 2001-07-04 Blastp of sequenced clone
CG7004 2003-01-01 Sim4 clustering to Release 3
fwd 2008-04-29 Release 5.5 accounting
fwd 2008-08-15 Release 5.9 accounting
fwd 2008-12-18 5.12 accounting

Clone Sequence Records

LP07057.complete Sequence

6341 bp (6341 high quality bases) assembled on 2001-07-04

GenBank Submission: AY052049

> LP07057.complete
TCGATTGCTTTGGACGTGTAGACGTCCGGTCGTCGCGTAATTTGTTTTTG
TAGTAGAATACAAAGGAAGCAGAAGCGGATTACAGATAATTTTGAAGTGC
TGCAGCTGTGCATAATAAGGTGGTAAACACAGTCCAAAGGAGTACGCGCC
GCTTCATTCGTGCACCCTTGTGTATCGACGATGTATACACACTATGGGCG
CGTCTCTTTTTGTTCCTTCGCGCGTGTGTGTGTGTGTGTCTGACATCGCC
CTGCCTGCGTGTGTGTCTGTGTCTCGCCCCTCGGTCGCAGCGAGCAGAGC
AGCCCTCTCCTCTTGTCCCATAAAGTCAATGTACAACTTGTTTATATTTA
AGATTTGAGATCGACCCGATACTGGCAAGGAAGCACGCAGAATGCTGGTG
GAATATTGAAACAAGTGTCGTCGAATTGTGATTTCTCGTCGAGTGAATTT
TCGCACGCACACAACGCCAGCATTGCTCGCAAACACACGCACACAAGCGA
AACGAGATTTTGCAAGTCGCGTACGTGCTGGTAGTGGTGCCCGTTGTAGT
TGTAACCGTGCCTGTGTTGGTGTGGTGTTAGTGCTTGTGCAACTTAAAAA
TTCAATTGTTTATTGCTGGGCAAAACTGGTACCGTGTACCGCGTACCTGG
AAAACAACATTTAAAGCGAACGCCAGGCGAATCGAGAGTTCCGAGCAAGT
GGGCAACAATAAGGTGTCGCTGCGGCGCCTGCTCATTTCCACGGTGATAA
TAATCGGCATAGGGTTCCGACGCGAAAGCCACAAGTGAAAGTGGAATGCT
CTGCCTATTCGCGTTAGTTGGCATAGTCTTCAATACCCAGCGAATTACAT
CTCTCCGACTGGATATGAAGATATTTGGGTCGATGGGTGAAAAGCGACTG
TCGCTGCTACTATAAAAAGGACGATCTGATATGAGAGCCATATATTCCGC
GCCAATGAGCGGAGACGACAGCGCAATTAGATGAGAAAGACCCCATGACC
CAGAGCAAAACATTTCACTCGAAAACGCATAGTTAAGCGATGGAACTAAC
AAGCAATTCCGAGGTTGTGCCAGAAATACATGCTTACATCGCCATTTAAG
CACACTCAATAACTATTAGAAGCCAAACTTTATCTGCCTACAAGACTATC
CGCATTAAAATCAAAATGAACTCCGTAATATCAGCATTTAAAGGAAAAAA
AAATAGCAATCCATCCTGCAATTCTCCAATGGGATCGGCGAATGGCACTG
CTCCGGTGGAGGCAAAGCCAAACAATTGCTACCAGTACCTGCGCCACATA
CGCGAAATCGATACAAACAACAAGCTCCTTTCTCCCGTCGTGGTTGTTGC
AGAGGAGAGGCCAGTGAGCAAGGCTGGTTCGCCCTCGACAGTGGCGACCA
TGGCTACTGGAGTCGATGTGGTGGATCACTGCCTGCCCACAACGGTACGA
TTGTCCGTTACCGAGGCGCTATCCGACTTGAACATGAACGGAAAAGCCGT
CGAACCCCCCGTCACCCCATGCACTTCGGTTGGCGACAATGCCAATCTGG
AGGTGGCTGAAACATGGGCTTGTCCACCGCCACAAGCGACGGATGACGAG
GACATATCCGAGCACTCGACAGCCGCCTGCACCAGCACAAGTAGCTCCAG
CGAGCACAGCAACAGCACCGTGGTGCACAGTCCAACTGTGGGGGAGAGCA
CCTGTGACTCCGTGTCCGTCTCGGTAAGCCATCCAAGTCCCAGCGTGAGT
CAGAACAACACATCGTCCGCCACCGGCCGGATGAGTAGCCCCCACAGCCA
GTCGTCGCTCTCCATAGCCTGCGAGCCGCACTCGGCGTCGACCACCACGC
TGTCGTCGCTGGGATCAGACCTGGGCAATGGAAACGGAAGTACCGTACCC
GCGTTTCTAATGGCCGCCCCCGTCACGCTGCCAATTGGCGGCCAGATGCC
CACGATAAAGTGCCTCCCAGGAGCAAGCTCAGCGGCCAGCACGCCCAAGC
ACTCGCGCTACTCTAAGCCTCGTCTCAGCCTGAGCCGCGTGTTTAATCAC
TCTATGCCCTCCGTGCACGGCCGACCAAATCTCAGTTTAGCGCCAGCTGG
AGTTCCGGGAAGTGTGAATCCGCCGAAACGTATTTCCACGCACCAAAGAA
ACCTAAGCTTGGATTTTAGATCCATGGGCATACTTCTTCCGCCTGTCTCG
CAGGTGACCAATAATCACATCAATCACACCCAGCACCACCGCAATCGCAG
CCTCGACAGTGCCTTGCAACGCATTCCGGAGGTCGAAGTGTCATCGCCAA
ATGCTGAAAGCGAAAACACGTTCTGCTCACCGTCCATTCTCGGTGCGACT
ATGTGCTCAAAAATTGCCACGACAGCGGCAACTGTAACGTCAGCCCTGTC
CCCACCAGGCACGCCCACACCGGCTCTGATGTCGACGGCGTGCACGCCCA
CGATTGGAGCCGTAAAGGGCAACGTGCAACATCCCGTGCCGAAGCATGAG
CAATCGATTTCTTTGGCAGCTGCTTGCAGGTCCAGTGCCGTCGTGGAATC
CTGTCCAACGTTACGAATGCGCCCAAAATCCAGCGAGTCGGTTGCGGCCA
ATGGACAAGAGATGATCGGCGTCATTGTCAGCAGCACGGGCAACGGCAGT
AGCAGCAGTAATAATAGCTGTAGTAGCGCTGGTAGCACCAAGAAGCGAGA
GGATCTCACCAGTCTTGGATCGGATGATTCTGGCATCATCTGTGGCTCAG
AGTCGGACCAAATATCTCTGAATCGCATATGCCACTCACATGAGTCGCTT
GATTCGGGTGAGATGGATGCGGATGCCGATGCAGAAGAGGAGTGCGTTGA
TCTTATGGATACGACATCCATCGACGAGGAGTACAACATTATGCAGCCGG
ACCATCTCTGCCTCTATCCTCCACAGGCCGCTTCCACCGAATTGGACTGC
CGCACCCTGCGTCCGTCTCGGAAACAAAAGCGACAGCAACAGCAGGTCCT
GGAGCGGAAGAATCTACCGTCCCAAAACCAGATCGAAAGCGAAGACTCAG
TGGATGCTGGCGTCGACGCCCGAACACGCTATCGCGTTATGAACATGTCG
CAGGCAGCTATCAATGTTGAACTCGGAACAGCTTCCAATGAAATCGATCC
GGATGTCAACTACAGAGAATCTCACCAAGATCCCATCGCTGATGCACCTT
CCCTCTCCACCCCAAGTGTAGCATCAACGGCGTCAGCCACGCCATCGGTA
ACCCCAACACCGATTGCCACTCCGACACCAACGGAGAGCACCAAGAACGA
CCAAGTGCTGTTTAAGAATTTCTTTGGCGCCACCAAGAATGCCATATTTC
GCACAGCCCAGAGCATTATTGAAAACCATGAGAAGAAAAACGCTGCTAAG
CAGAAGGAGCAGCCTGATCACTCAGGGACAGTCAGCTTAGTGGGTTCGCC
AAATGGAGGAAGCAGTGTGCCACAAGACCTGGTCAAGTCTCCCACAGACA
TTTCGAAAAAGAAGGAATTCTTTAGTTTGCTCACGTCTAGTTCCAGCATA
AAGGCAGCGGCTGCAGCTGCGGCGAACTCAGCTGCTAGCACTCCTCCTGC
CACGCCTACGGAGGCACTAGCTGCGAATTCAAATTCGAAGCTTCAACCGC
TTTCCGATCCATCTGCCGATTTAAAAGTAAAGGAACGTACTCTCAACTTG
CGTCTACCTGGAGATAGTGAAGGCAGTGAAGGAGCATTGACAAAGTGTTC
ATCAATCAACTCGATACACAAACTAAAGCTTCCTGTTCCTGGTGTCGTTA
AGTATTTCATCAGTGAAAAAGCACCTGTGTCTGATGTGCTCCAGAAGCCA
GAGAAAGGCCAAAGCGGCCTTTTGCGTTTCTTTGAGTCGCCAGTGTTCAA
CATACACTTTGCTGTGCATTATCTCTTTTACTCAAAGGAACCGGGAGTCC
TCAGCTTTATCGGCAACAAGATCTTCAGTTTTCCCGACCAAGAGGTTGAT
CTGTACATACCACAATTGGTTGTTATGTACATTCAGATGGATGAGCTAGC
TGAGGTTCTGGATCCGTATCTTACCATTCGGTGTCGCAAGTCGGTTGACT
TCTCGCTGAAGTGTCTGTGGCTCTTGGAGGCATATAACTACCAAGTGGAC
TCGCTAGGGAACTCACACAACAGTTCTCGGAAATCAAAGCTGGCGCTCAT
GAAGGAAATATTCTCAAAAAGGGAGCACAAACAGACTCAAAACGACCTCA
AGTCTGCAGGTACTGGAGGTCTGCATGTTGGAGAGCCGAGGTCGGTAGTC
GCGCTTGCCAAGAAGACTCACCACCGCTCGCAATCTGATGCCACTGTGCT
CCTAGCCGACTTTCGCTCGCCTCACACACTGAGTATATCGCATCGTATGT
ACCAGCAGCCACCCTATACCACACAAACACTTCCCACTACGCCCGCCAAG
CTGTGCCTCGGTGACTTAACTTCCGGCCACGCATTTGATAACGGGTGCAC
CTGCTTCGAGACGGTTCGAGGCCAAGTAAATGGTCTGCTTGGGCAGAGGA
CGCTATGCAGCTGTGGTGCTCCAAAGACGTCACCCCAGAAAGAGTTTATG
AAGGCATTGATGAACGTTGGTAAAAATCTCACCTCGTGGCCTTCCAAAGC
GGAGAAGACTTCAGCGCTGCGGATGTCCCTCAACTTGATTAACAAAAACC
TGCCCGCTAGAGTCTGGCTTCCTTTGTACTCAGACATTCCACATCATGTC
GTTCGTATTACAGAGGAGAAGACCGCAGTACTGAACTCGAAGGATAAAAC
CCCCTATATCATATACGTAGAAGTTGTTGAAATTCCTGACATCTATACTT
CTCCCCTGATTCCCAAAATGATGCCTTCACTGCGGCACACCAAGAGCGAA
GAGCACCTGGATGGGTCCTGCCTGAACTCCCACCAACATCTGAGCTGCAG
TCGAACTTCAAGCTGCAGTAGCAGTCAGCAAGGCACAAGTTGCCGCCGAA
AAAAAGGAGCAGATGTAGATGGCGGCTGCGGGGATGCGGGTCCACATAAT
AGCTGCAGCAATGTACATTCGTTAGGTGGACTTCAGTTCCAGGAAGATGA
CGTGTGGTCACAAGAGGAGGACGAAATAACAGCGCAGTATCTTAACATGC
GGAAAGTGAGCGAGCGGGACACAATTTCACAAATATCACTAGATTCCTGC
GATTCAAGAGATCAAGGTCCACCAGTCGTGTTTAATATTGGCGACGTGCG
CTTGCGCCACTGCAGCAATTTGAGCTGCGAAAATACTAAATCCTTCAGTA
ACGACCCGGAGGATCCTTCGGCGGCAGCTTTAAAGGAACCGTGGCACGAA
AAGGAAAAGCTTATCCGCGAGTCTTCGCCATACGGCCATCTATCAAACTG
GCGACTGCTTTCCGCCATCGTAAAGTGTGGCGATGATTTACGCCAAGAAC
TAATGGCTACCCAACTTTTACAGATGTTTAAAATTATTTGGCAAGAAGAG
CAAGTAGATCTGTGGGTGCGCCCGTACAAAATAGTCTGCCTCTCGAATGA
TAGTGGTCTTATAGAGCCGATCCTTAACACTGTATCCCTGCACCAAATTA
AGAAGAACTCCAACAAATCGTTGAAAGAGTATTTTATCGATGAATACGGC
TCACCAAGCGGAGAAAGTTTTCGGCGCGCGCAGAAGAACTTCGTCCAAAG
CTGTGCAGCTTACTGTCTAATTTCATATTTACTGCAAGTTAAGGACAGGC
ATAATGGCAACATTCTCTTCCATTCGGATGGGCACATTATACACATTGAC
TTTGGATTTATTTTAAGTATATCACCTAAAAACTTGGGATTCGAACAGTC
GCCCTTTAAGCTAACGCCGGAATTTGTTGAGGTGATGGGTGGCACGAGCT
CGGAGCATTGGCGTGAATTTAATAAGCTCTTGTTAGTTGGAATGATGTCT
GCTCGAAAGCATATGGATCGTATTATTAACTTCGTGGAAATTATGCGCAG
CAATGCGCATTTGCCGTGCTTTAAGAATGGGTGCTCTGGAACCGTACAGA
ATCTCCGAAAACGCTTTCATATGAATTTAACCGAACAAGAAATGGAGCGA
AAGGTTGAGCAGCTTGTACAGGACTCGTTAAAAAGTCTGTCAACCAAACT
GTACGACGGTTATCAATACTACACTAATGGCATATTGTGAGAACGGTTTT
TTATGAAGATCTAAATGGGTAATCATAATAGCGCATAGAAATTGCCAAGC
TGGTAACCAACATAATGGACTGACTCTTTTGTAAAGGAATTATTGTATAT
TATATAATATGTTATTATCACCGAAAAAAAAAAAAAAAAAA

LP07057.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:27:24
Subject Length Description Subject Range Query Range Score Percent Strand
fwd-RA 6386 fwd-RA 45..6383 1..6339 31680 99.9 Plus
fwd.d 7200 fwd.d 45..6383 1..6339 31680 99.9 Plus
fwd.h 6912 fwd.h 45..6383 1..6339 31680 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:36:36
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 307653..310139 5218..2732 12345 99.8 Minus
chr3L 24539361 chr3L 312977..314270 2169..876 6470 100 Minus
chr3L 24539361 chr3L 318944..319818 875..1 4375 100 Minus
chr3L 24539361 chr3L 306185..306505 6323..6003 1605 100 Minus
chr3L 24539361 chr3L 306941..307223 5749..5467 1415 100 Minus
chr3L 24539361 chr3L 310487..310750 2543..2280 1320 100 Minus
chr3L 24539361 chr3L 310238..310428 2733..2543 925 99 Minus
chr3L 24539361 chr3L 306565..306730 6002..5837 830 100 Minus
chr3L 24539361 chr3L 307279..307418 5473..5334 700 100 Minus
chr3L 24539361 chr3L 307471..307592 5336..5215 595 99.2 Minus
chr3L 24539361 chr3L 311133..311248 2283..2168 580 100 Minus
chr3L 24539361 chr3L 306788..306879 5838..5747 460 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:51:31 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:36:34
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 307693..310179 5218..2732 12435 100 Minus
3L 28110227 3L 313024..314317 2169..876 6470 100 Minus
3L 28110227 3L 318991..319865 875..1 4375 100 Minus
3L 28110227 3L 306210..306546 6339..6003 1670 99.7 Minus
3L 28110227 3L 306981..307263 5749..5467 1415 100 Minus
3L 28110227 3L 310525..310788 2543..2280 1320 100 Minus
3L 28110227 3L 310276..310466 2733..2543 955 100 Minus
3L 28110227 3L 306605..306770 6002..5837 830 100 Minus
3L 28110227 3L 307319..307458 5473..5334 700 100 Minus
3L 28110227 3L 307511..307632 5336..5215 610 100 Minus
3L 28110227 3L 311172..311287 2283..2168 580 100 Minus
3L 28110227 3L 306828..306919 5838..5747 460 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:49:53
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 307693..310179 5218..2732 12435 100 Minus
3L 28103327 3L 313024..314317 2169..876 6470 100 Minus
3L 28103327 3L 318991..319865 875..1 4375 100 Minus
3L 28103327 3L 306210..306546 6339..6003 1670 99.7 Minus
3L 28103327 3L 306981..307263 5749..5467 1415 100 Minus
3L 28103327 3L 310525..310788 2543..2280 1320 100 Minus
3L 28103327 3L 310276..310466 2733..2543 955 100 Minus
3L 28103327 3L 306605..306770 6002..5837 830 100 Minus
3L 28103327 3L 307319..307458 5473..5334 700 100 Minus
3L 28103327 3L 307511..307632 5336..5215 610 100 Minus
3L 28103327 3L 311172..311287 2283..2168 580 100 Minus
3L 28103327 3L 306828..306919 5838..5747 460 100 Minus
Blast to na_te.dros performed 2019-03-16 04:36:34
Subject Length Description Subject Range Query Range Score Percent Strand
rover 7318 rover ROVER 7318bp 3837..3918 4156..4243 128 65.9 Plus

LP07057.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:37:30 Download gff for LP07057.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 310343..310427 2544..2628 98 <- Minus
chr3L 306185..306505 6003..6323 100 <- Minus
chr3L 306565..306729 5838..6002 100 <- Minus
chr3L 306789..306877 5749..5837 100 <- Minus
chr3L 306942..307216 5474..5748 100 <- Minus
chr3L 307279..307416 5336..5473 100 <- Minus
chr3L 307472..307590 5217..5335 99 <- Minus
chr3L 307655..310138 2733..5216 99 <- Minus
chr3L 310239..310280 2691..2732 100 == Minus
chr3L 310487..310748 2282..2543 100 <- Minus
chr3L 311135..311246 2170..2281 100 <- Minus
chr3L 312977..314270 876..2169 100 <- Minus
chr3L 318944..319818 1..875 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:41:25 Download gff for LP07057.complete
Subject Subject Range Query Range Percent Splice Strand
fwd-RA 1..5025 1166..6190 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:14:11 Download gff for LP07057.complete
Subject Subject Range Query Range Percent Splice Strand
fwd-RA 1..5025 1166..6190 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:36:13 Download gff for LP07057.complete
Subject Subject Range Query Range Percent Splice Strand
fwd-RB 1..5025 1166..6190 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:45:28 Download gff for LP07057.complete
Subject Subject Range Query Range Percent Splice Strand
fwd-RA 1..5025 1166..6190 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:45:52 Download gff for LP07057.complete
Subject Subject Range Query Range Percent Splice Strand
fwd-RB 1..5025 1166..6190 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:41:23 Download gff for LP07057.complete
Subject Subject Range Query Range Percent Splice Strand
fwd-RA 16..6338 1..6323 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:14:11 Download gff for LP07057.complete
Subject Subject Range Query Range Percent Splice Strand
fwd-RA 16..6338 1..6323 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:36:13 Download gff for LP07057.complete
Subject Subject Range Query Range Percent Splice Strand
fwd-RA 20..6342 1..6323 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:45:28 Download gff for LP07057.complete
Subject Subject Range Query Range Percent Splice Strand
fwd-RA 16..6338 1..6323 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:45:52 Download gff for LP07057.complete
Subject Subject Range Query Range Percent Splice Strand
fwd-RA 20..6342 1..6323 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:37:30 Download gff for LP07057.complete
Subject Subject Range Query Range Percent Splice Strand
3L 307512..307630 5217..5335 100 <- Minus
3L 306982..307256 5474..5748 100 <- Minus
3L 306226..306546 6003..6323 100 <- Minus
3L 306605..306769 5838..6002 100 <- Minus
3L 306829..306917 5749..5837 100 <- Minus
3L 307319..307456 5336..5473 100 <- Minus
3L 307695..310178 2733..5216 100 <- Minus
3L 310277..310465 2544..2732 100 <- Minus
3L 310525..310786 2282..2543 100 <- Minus
3L 311174..311285 2170..2281 100 <- Minus
3L 313024..314317 876..2169 100 <- Minus
3L 318991..319865 1..875 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:37:30 Download gff for LP07057.complete
Subject Subject Range Query Range Percent Splice Strand
3L 307512..307630 5217..5335 100 <- Minus
3L 306982..307256 5474..5748 100 <- Minus
3L 306226..306546 6003..6323 100 <- Minus
3L 306605..306769 5838..6002 100 <- Minus
3L 306829..306917 5749..5837 100 <- Minus
3L 307319..307456 5336..5473 100 <- Minus
3L 307695..310178 2733..5216 100 <- Minus
3L 310277..310465 2544..2732 100 <- Minus
3L 310525..310786 2282..2543 100 <- Minus
3L 311174..311285 2170..2281 100 <- Minus
3L 313024..314317 876..2169 100 <- Minus
3L 318991..319865 1..875 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:37:30 Download gff for LP07057.complete
Subject Subject Range Query Range Percent Splice Strand
3L 307512..307630 5217..5335 100 <- Minus
3L 306982..307256 5474..5748 100 <- Minus
3L 306226..306546 6003..6323 100 <- Minus
3L 306605..306769 5838..6002 100 <- Minus
3L 306829..306917 5749..5837 100 <- Minus
3L 307319..307456 5336..5473 100 <- Minus
3L 307695..310178 2733..5216 100 <- Minus
3L 310277..310465 2544..2732 100 <- Minus
3L 310525..310786 2282..2543 100 <- Minus
3L 311174..311285 2170..2281 100 <- Minus
3L 313024..314317 876..2169 100 <- Minus
3L 318991..319865 1..875 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:36:13 Download gff for LP07057.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 307512..307630 5217..5335 100 <- Minus
arm_3L 306226..306546 6003..6323 100 <- Minus
arm_3L 306605..306769 5838..6002 100 <- Minus
arm_3L 306829..306917 5749..5837 100 <- Minus
arm_3L 306982..307256 5474..5748 100 <- Minus
arm_3L 307319..307456 5336..5473 100 <- Minus
arm_3L 307695..310178 2733..5216 100 <- Minus
arm_3L 310277..310465 2544..2732 100 <- Minus
arm_3L 310525..310786 2282..2543 100 <- Minus
arm_3L 311174..311285 2170..2281 100 <- Minus
arm_3L 313024..314317 876..2169 100 <- Minus
arm_3L 318991..319865 1..875 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:23:19 Download gff for LP07057.complete
Subject Subject Range Query Range Percent Splice Strand
3L 310525..310786 2282..2543 100 <- Minus
3L 311174..311285 2170..2281 100 <- Minus
3L 306226..306546 6003..6323 100 <- Minus
3L 306605..306769 5838..6002 100 <- Minus
3L 306829..306917 5749..5837 100 <- Minus
3L 306982..307256 5474..5748 100 <- Minus
3L 307319..307456 5336..5473 100 <- Minus
3L 307512..307630 5217..5335 100 <- Minus
3L 307695..310178 2733..5216 100 <- Minus
3L 310277..310465 2544..2732 100 <- Minus
3L 313024..314317 876..2169 100 <- Minus
3L 318991..319865 1..875 100   Minus

LP07057.pep Sequence

Translation from 1165 to 6189

> LP07057.pep
MNSVISAFKGKKNSNPSCNSPMGSANGTAPVEAKPNNCYQYLRHIREIDT
NNKLLSPVVVVAEERPVSKAGSPSTVATMATGVDVVDHCLPTTVRLSVTE
ALSDLNMNGKAVEPPVTPCTSVGDNANLEVAETWACPPPQATDDEDISEH
STAACTSTSSSSEHSNSTVVHSPTVGESTCDSVSVSVSHPSPSVSQNNTS
SATGRMSSPHSQSSLSIACEPHSASTTTLSSLGSDLGNGNGSTVPAFLMA
APVTLPIGGQMPTIKCLPGASSAASTPKHSRYSKPRLSLSRVFNHSMPSV
HGRPNLSLAPAGVPGSVNPPKRISTHQRNLSLDFRSMGILLPPVSQVTNN
HINHTQHHRNRSLDSALQRIPEVEVSSPNAESENTFCSPSILGATMCSKI
ATTAATVTSALSPPGTPTPALMSTACTPTIGAVKGNVQHPVPKHEQSISL
AAACRSSAVVESCPTLRMRPKSSESVAANGQEMIGVIVSSTGNGSSSSNN
SCSSAGSTKKREDLTSLGSDDSGIICGSESDQISLNRICHSHESLDSGEM
DADADAEEECVDLMDTTSIDEEYNIMQPDHLCLYPPQAASTELDCRTLRP
SRKQKRQQQQVLERKNLPSQNQIESEDSVDAGVDARTRYRVMNMSQAAIN
VELGTASNEIDPDVNYRESHQDPIADAPSLSTPSVASTASATPSVTPTPI
ATPTPTESTKNDQVLFKNFFGATKNAIFRTAQSIIENHEKKNAAKQKEQP
DHSGTVSLVGSPNGGSSVPQDLVKSPTDISKKKEFFSLLTSSSSIKAAAA
AAANSAASTPPATPTEALAANSNSKLQPLSDPSADLKVKERTLNLRLPGD
SEGSEGALTKCSSINSIHKLKLPVPGVVKYFISEKAPVSDVLQKPEKGQS
GLLRFFESPVFNIHFAVHYLFYSKEPGVLSFIGNKIFSFPDQEVDLYIPQ
LVVMYIQMDELAEVLDPYLTIRCRKSVDFSLKCLWLLEAYNYQVDSLGNS
HNSSRKSKLALMKEIFSKREHKQTQNDLKSAGTGGLHVGEPRSVVALAKK
THHRSQSDATVLLADFRSPHTLSISHRMYQQPPYTTQTLPTTPAKLCLGD
LTSGHAFDNGCTCFETVRGQVNGLLGQRTLCSCGAPKTSPQKEFMKALMN
VGKNLTSWPSKAEKTSALRMSLNLINKNLPARVWLPLYSDIPHHVVRITE
EKTAVLNSKDKTPYIIYVEVVEIPDIYTSPLIPKMMPSLRHTKSEEHLDG
SCLNSHQHLSCSRTSSCSSSQQGTSCRRKKGADVDGGCGDAGPHNSCSNV
HSLGGLQFQEDDVWSQEEDEITAQYLNMRKVSERDTISQISLDSCDSRDQ
GPPVVFNIGDVRLRHCSNLSCENTKSFSNDPEDPSAAALKEPWHEKEKLI
RESSPYGHLSNWRLLSAIVKCGDDLRQELMATQLLQMFKIIWQEEQVDLW
VRPYKIVCLSNDSGLIEPILNTVSLHQIKKNSNKSLKEYFIDEYGSPSGE
SFRRAQKNFVQSCAAYCLISYLLQVKDRHNGNILFHSDGHIIHIDFGFIL
SISPKNLGFEQSPFKLTPEFVEVMGGTSSEHWREFNKLLLVGMMSARKHM
DRIINFVEIMRSNAHLPCFKNGCSGTVQNLRKRFHMNLTEQEMERKVEQL
VQDSLKSLSTKLYDGYQYYTNGIL*

LP07057.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:59:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25052-PA 1718 GF25052-PA 1..1718 1..1674 6083 75.6 Plus
Dana\GF22236-PA 2129 GF22236-PA 1868..2127 1409..1673 518 40.1 Plus
Dana\GF13065-PA 945 GF13065-PA 691..941 1417..1671 309 29.8 Plus
Dana\GF24513-PA 1862 GF24513-PA 1308..1560 1415..1662 275 30.1 Plus
Dana\GF18327-PA 1099 GF18327-PA 829..1038 1415..1612 246 30 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:59:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14670-PA 1707 GG14670-PA 1..1707 1..1674 7720 93.5 Plus
Dere\GG12942-PA 2132 GG12942-PA 1871..2130 1409..1673 517 40.1 Plus
Dere\GG22867-PA 947 GG22867-PA 692..943 1416..1671 311 29.3 Plus
Dere\GG13889-PA 1873 GG13889-PA 1319..1571 1415..1662 289 30.7 Plus
Dere\GG15290-PA 1086 GG15290-PA 817..1025 1418..1612 254 30 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:59:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15747-PA 1699 GH15747-PA 1..1699 1..1674 5331 66.2 Plus
Dgri\GH24853-PA 2109 GH24853-PA 1848..2107 1409..1673 517 39.7 Plus
Dgri\GH21209-PA 945 GH21209-PA 691..928 1417..1658 308 30.7 Plus
Dgri\GH16381-PA 1883 GH16381-PA 1329..1581 1415..1662 289 30.4 Plus
Dgri\GH16124-PA 1084 GH16124-PA 815..1023 1418..1612 262 31.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:50:58
Subject Length Description Subject Range Query Range Score Percent Strand
fwd-PD 1674 CG7004-PD 1..1674 1..1674 8694 100 Plus
fwd-PA 1674 CG7004-PA 1..1674 1..1674 8694 100 Plus
fwd-PB 1674 CG7004-PB 1..1674 1..1674 8694 100 Plus
fwd-PC 1338 CG7004-PC 1..1338 337..1674 6955 100 Plus
PI4KIIIalpha-PC 2134 CG10260-PC 1873..2132 1409..1673 494 40.1 Plus
PI4KIIIalpha-PD 2154 CG10260-PD 1893..2152 1409..1673 494 40.1 Plus
Pi3K59F-PA 949 CG5373-PA 694..944 1416..1670 333 30 Plus
Pi3K68D-PD 1876 CG11621-PD 1322..1573 1415..1661 275 30.9 Plus
Pi3K68D-PA 1876 CG11621-PA 1322..1573 1415..1661 275 30.9 Plus
Pi3K68D-PC 1876 CG11621-PC 1322..1573 1415..1661 275 30.9 Plus
Pi3K92E-PC 1088 CG4141-PC 819..1027 1418..1612 252 30 Plus
Pi3K92E-PB 1088 CG4141-PB 819..1027 1418..1612 252 30 Plus
Pi3K92E-PA 1088 CG4141-PA 819..1027 1418..1612 252 30 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:59:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24147-PA 1693 GI24147-PA 1..1693 1..1674 5382 67.5 Plus
Dmoj\GI17272-PA 1386 GI17272-PA 14..1386 205..1674 4335 62.3 Plus
Dmoj\GI14401-PA 2101 GI14401-PA 1840..2099 1409..1673 514 39.3 Plus
Dmoj\GI20497-PA 943 GI20497-PA 689..926 1417..1658 303 30.1 Plus
Dmoj\GI11573-PA 1885 GI11573-PA 1331..1583 1415..1662 283 30 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:59:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16101-PA 1262 GL16101-PA 1..1087 337..1407 3747 75.3 Plus
Dper\GL16101-PA 1262 GL16101-PA 1116..1262 1528..1674 814 98 Plus
Dper\GL26893-PA 1992 GL26893-PA 1731..1990 1409..1673 518 40.1 Plus
Dper\GL16871-PA 966 GL16871-PA 712..961 1417..1670 304 29.2 Plus
Dper\GL20824-PA 1478 GL20824-PA 923..1175 1415..1662 277 30.4 Plus
Dper\GL27142-PA 1103 GL27142-PA 834..1042 1418..1612 256 30 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:59:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20022-PA 1802 GA20022-PA 821..1802 710..1674 4401 86.6 Plus
Dpse\GA10199-PA 2131 GA10199-PA 1870..2129 1409..1673 518 40.1 Plus
Dpse\GA18829-PA 966 GA18829-PA 712..961 1417..1670 304 29.2 Plus
Dpse\GA11104-PA 1890 GA11104-PA 1335..1587 1415..1662 285 30.4 Plus
Dpse\GA17984-PA 1103 GA17984-PA 834..1042 1418..1612 257 30 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:59:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14285-PA 1680 GM14285-PA 1..1680 22..1674 8626 96.1 Plus
Dsec\GM19234-PA 2113 GM19234-PA 1852..2111 1409..1673 519 40.1 Plus
Dsec\GM16028-PA 949 GM16028-PA 694..945 1416..1671 310 29.3 Plus
Dsec\GM24713-PA 1747 GM24713-PA 1193..1445 1415..1662 283 30.7 Plus
Dsec\GM23175-PA 1088 GM23175-PA 819..1027 1418..1612 253 30 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:59:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25715-PA 1684 GD25715-PA 1..1684 1..1674 8708 97 Plus
Dsim\GD16614-PA 266 GD16614-PA 5..264 1409..1673 518 40.1 Plus
Dsim\GD11777-PA 949 GD11777-PA 694..945 1416..1671 311 29.3 Plus
Dsim\GD12776-PA 1876 GD12776-PA 1322..1574 1415..1662 289 30.7 Plus
Dsim\GD20048-PA 1079 GD20048-PA 810..1018 1418..1612 254 30 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:59:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23452-PA 1722 GJ23452-PA 1..1722 1..1674 5332 66.8 Plus
Dvir\GJ22790-PA 1592 GJ22790-PA 1..1592 1..1674 4731 61.5 Plus
Dvir\GJ18747-PA 551 GJ18747-PA 290..549 1409..1673 511 39.7 Plus
Dvir\GJ22348-PA 943 GJ22348-PA 689..926 1417..1658 303 31.1 Plus
Dvir\GJ11253-PA 1887 GJ11253-PA 1333..1585 1415..1662 288 30.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:59:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17653-PA 1646 GK17653-PA 1..1646 1..1674 5329 67.5 Plus
Dwil\GK25066-PA 2134 GK25066-PA 1873..2132 1409..1673 511 39.3 Plus
Dwil\GK23281-PA 931 GK23281-PA 677..926 1417..1670 310 30 Plus
Dwil\GK12371-PA 1879 GK12371-PA 1325..1577 1415..1662 283 30.4 Plus
Dwil\GK22711-PA 1113 GK22711-PA 844..1092 1418..1655 260 28.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:59:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21031-PA 1704 GE21031-PA 1..1704 1..1674 7750 93.1 Plus
Dyak\GE16267-PA 2107 GE16267-PA 1846..2105 1409..1673 521 40.1 Plus
Dyak\GE14305-PA 947 GE14305-PA 692..943 1416..1671 311 29.3 Plus
Dyak\GE20180-PA 1875 GE20180-PA 1321..1573 1415..1662 286 30.7 Plus
Dyak\GE25053-PA 1088 GE25053-PA 819..1027 1418..1612 254 30 Plus

LP07057.hyp Sequence

Translation from 1165 to 6189

> LP07057.hyp
MNSVISAFKGKKNSNPSCNSPMGSANGTAPVEAKPNNCYQYLRHIREIDT
NNKLLSPVVVVAEERPVSKAGSPSTVATMATGVDVVDHCLPTTVRLSVTE
ALSDLNMNGKAVEPPVTPCTSVGDNANLEVAETWACPPPQATDDEDISEH
STAACTSTSSSSEHSNSTVVHSPTVGESTCDSVSVSVSHPSPSVSQNNTS
SATGRMSSPHSQSSLSIACEPHSASTTTLSSLGSDLGNGNGSTVPAFLMA
APVTLPIGGQMPTIKCLPGASSAASTPKHSRYSKPRLSLSRVFNHSMPSV
HGRPNLSLAPAGVPGSVNPPKRISTHQRNLSLDFRSMGILLPPVSQVTNN
HINHTQHHRNRSLDSALQRIPEVEVSSPNAESENTFCSPSILGATMCSKI
ATTAATVTSALSPPGTPTPALMSTACTPTIGAVKGNVQHPVPKHEQSISL
AAACRSSAVVESCPTLRMRPKSSESVAANGQEMIGVIVSSTGNGSSSSNN
SCSSAGSTKKREDLTSLGSDDSGIICGSESDQISLNRICHSHESLDSGEM
DADADAEEECVDLMDTTSIDEEYNIMQPDHLCLYPPQAASTELDCRTLRP
SRKQKRQQQQVLERKNLPSQNQIESEDSVDAGVDARTRYRVMNMSQAAIN
VELGTASNEIDPDVNYRESHQDPIADAPSLSTPSVASTASATPSVTPTPI
ATPTPTESTKNDQVLFKNFFGATKNAIFRTAQSIIENHEKKNAAKQKEQP
DHSGTVSLVGSPNGGSSVPQDLVKSPTDISKKKEFFSLLTSSSSIKAAAA
AAANSAASTPPATPTEALAANSNSKLQPLSDPSADLKVKERTLNLRLPGD
SEGSEGALTKCSSINSIHKLKLPVPGVVKYFISEKAPVSDVLQKPEKGQS
GLLRFFESPVFNIHFAVHYLFYSKEPGVLSFIGNKIFSFPDQEVDLYIPQ
LVVMYIQMDELAEVLDPYLTIRCRKSVDFSLKCLWLLEAYNYQVDSLGNS
HNSSRKSKLALMKEIFSKREHKQTQNDLKSAGTGGLHVGEPRSVVALAKK
THHRSQSDATVLLADFRSPHTLSISHRMYQQPPYTTQTLPTTPAKLCLGD
LTSGHAFDNGCTCFETVRGQVNGLLGQRTLCSCGAPKTSPQKEFMKALMN
VGKNLTSWPSKAEKTSALRMSLNLINKNLPARVWLPLYSDIPHHVVRITE
EKTAVLNSKDKTPYIIYVEVVEIPDIYTSPLIPKMMPSLRHTKSEEHLDG
SCLNSHQHLSCSRTSSCSSSQQGTSCRRKKGADVDGGCGDAGPHNSCSNV
HSLGGLQFQEDDVWSQEEDEITAQYLNMRKVSERDTISQISLDSCDSRDQ
GPPVVFNIGDVRLRHCSNLSCENTKSFSNDPEDPSAAALKEPWHEKEKLI
RESSPYGHLSNWRLLSAIVKCGDDLRQELMATQLLQMFKIIWQEEQVDLW
VRPYKIVCLSNDSGLIEPILNTVSLHQIKKNSNKSLKEYFIDEYGSPSGE
SFRRAQKNFVQSCAAYCLISYLLQVKDRHNGNILFHSDGHIIHIDFGFIL
SISPKNLGFEQSPFKLTPEFVEVMGGTSSEHWREFNKLLLVGMMSARKHM
DRIINFVEIMRSNAHLPCFKNGCSGTVQNLRKRFHMNLTEQEMERKVEQL
VQDSLKSLSTKLYDGYQYYTNGIL*

LP07057.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:39:43
Subject Length Description Subject Range Query Range Score Percent Strand
fwd-PD 1674 CG7004-PD 1..1674 1..1674 8694 100 Plus
fwd-PA 1674 CG7004-PA 1..1674 1..1674 8694 100 Plus
fwd-PB 1674 CG7004-PB 1..1674 1..1674 8694 100 Plus
fwd-PC 1338 CG7004-PC 1..1338 337..1674 6955 100 Plus
PI4KIIIalpha-PC 2134 CG10260-PC 1873..2132 1409..1673 494 40.1 Plus