Clone LP07155 Report

Search the DGRC for LP07155

Clone and Library Details

Library:LP
Tissue Source:Drosophila melanogaster larval-early pupal
Created by:Ling Hong
Date Registered:1998-06-11
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:71
Well:55
Vector:pOT2
Associated Gene/TranscriptAdenoK-RB
Protein status:LP07155.pep: gold
Sequenced Size:1356

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11255 2002-11-15 Blastp of sequenced clone
CG11255 2008-04-29 Release 5.5 accounting
CG11255 2008-08-15 Release 5.9 accounting
CG11255 2008-12-18 5.12 accounting

Clone Sequence Records

LP07155.complete Sequence

1356 bp (1356 high quality bases) assembled on 2002-11-15

GenBank Submission: BT003559

> LP07155.complete
GACGAGCAACATGTGCGATCGCGTCAGAGAAGGAATCCTGGTCGGATGCG
GCAACCCGCTGCTGGACATCTCCGCCGTTGTTCCACTGAACTTCCTGCAG
AAGTACTCTATGAACGAGGATGATGCGATCCTTGCCGAGGACCGACACAT
GCCCATCTACGGGGAGCTGGTCGAAGGCTACCAGGCTGAGTTTCTGGCTG
GCGGATCCGTGCAAAATTCTCTGAGAATTGCCCAATGGATTCTTCGACAG
CCCAGGGTGGCTGTGTTCTTCGGCTGCGTCGGCGAGGATCGGTACGCCAA
TATCTTGAAGGAAAAGGCGCAAGCCGCCGGACTGGATGTTCACTACCAGG
TGAAGAAGGACGTGCCCACGGGAACCTGTGCCGTTCTGATCACCGGCACC
CACCGATCGCTCTGCGCTAATCTGGCGGCCGCCAATAACTTCACCATCGA
TCACCTGGAGGAGCCCAGCAACAAGGCTCTGGTGGATAACGCCCAGTACT
ACTACATTTCGGGCTTCTTCCTCACTGTGAACCCGCCAAGCATTATGCAG
GTGGCGGCCACCGCCCACGCCAAACAGCGACCGTTCCTAATGAACCTCAG
CGCACCATTCATATCGCAATTCTACATGGCACCGCTGCTGGCCGCCCTGC
CTTACGTGGACATCATCTTTGGCAACGAGGCGGAGGCTCAGGCGTTCGCC
GAGGCCCAGCAGTGGCCTAGCGGGGACCTGCGCGAGATTGGCAAGCGACT
GGTGGCGATGGAGAAGAAAAACCCGACGCGGCCGCGCATTGCCATTCTCA
CGCAGGGCTGCGATCCTGTACTGCTTATACAGCAGGATTCGGTGCAGGAA
TTCCCGGTCACGAAATTGGCGGTGCATGAAATTGTCGATACCAATGGCGC
TGGGGATGCATTCGTTGGAGGTTTCCTATCGCAGTTTGTGCAGGGCAAGT
CGCTGGATGTCTGCATCAGGTGCGGAAACTATGCAGCCGGGCACATTATC
AAGAATCCAGGTTGCACATACTCCGGCGAACCGGAGTTCGTTGAGTAAAA
CCGGATGCGGAAGCTACAGAAACCTTACACACATCGGACATCGAAGGAGC
CAGACAAAGCGCAGCAAGATTTGCAATTGTTAATTAAGTAAATGAGAGTG
ACTAAAAGATTTTGTTAACACTGATAATTGTTTGTACATACATATAACCC
ACACTCAGACACATACAAAAGCATACACATGTGAAATGACATGAACAAAT
AGAGAGAGTGAGGCTTGTGTCTTATAGATAGAGCAATATTCGAATTTAAA
TTGATAATAAAACAAAAGTGACACGCGAGCGAGACACAAAAAAAAAAAAA
AAAAAA

LP07155.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:32:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG11255-RB 1503 CG11255-RB 94..1434 1..1341 6705 100 Plus
CG11255-RA 1749 CG11255-RA 367..1680 28..1341 6570 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:54:11
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 13010300..13011126 1337..511 4135 100 Minus
chr3L 24539361 chr3L 13011372..13011859 512..25 2440 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:51:38 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:54:09
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13019997..13020827 1341..511 4155 100 Minus
3L 28110227 3L 13021073..13021560 512..25 2440 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:08:15
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 13013097..13013927 1341..511 4155 100 Minus
3L 28103327 3L 13014173..13014660 512..25 2440 100 Minus
Blast to na_te.dros performed 2019-03-16 18:54:10
Subject Length Description Subject Range Query Range Score Percent Strand
roo 9092 roo DM_ROO 9092bp 8377..8637 1044..1301 127 52.7 Plus

LP07155.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:55:20 Download gff for LP07155.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 13010300..13011125 512..1337 100 <- Minus
chr3L 13011373..13011856 28..511 100 <- Minus
chr3L 13011927..13011953 1..27 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:37:57 Download gff for LP07155.complete
Subject Subject Range Query Range Percent Splice Strand
CG11255-RB 1..1038 11..1048 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:03:58 Download gff for LP07155.complete
Subject Subject Range Query Range Percent Splice Strand
CG11255-RB 1..1038 11..1048 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:28:12 Download gff for LP07155.complete
Subject Subject Range Query Range Percent Splice Strand
CG11255-RB 1..1038 11..1048 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:54:11 Download gff for LP07155.complete
Subject Subject Range Query Range Percent Splice Strand
CG11255-RB 1..1038 11..1048 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:54:15 Download gff for LP07155.complete
Subject Subject Range Query Range Percent Splice Strand
AdenoK-RB 1..1038 11..1048 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:22:48 Download gff for LP07155.complete
Subject Subject Range Query Range Percent Splice Strand
CG11255-RB 7..1343 1..1337 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:03:58 Download gff for LP07155.complete
Subject Subject Range Query Range Percent Splice Strand
CG11255-RB 6..1342 1..1337 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:28:12 Download gff for LP07155.complete
Subject Subject Range Query Range Percent Splice Strand
CG11255-RB 32..1368 1..1337 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:54:11 Download gff for LP07155.complete
Subject Subject Range Query Range Percent Splice Strand
CG11255-RB 7..1343 1..1337 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:54:15 Download gff for LP07155.complete
Subject Subject Range Query Range Percent Splice Strand
AdenoK-RB 32..1368 1..1337 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:55:20 Download gff for LP07155.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13020001..13020826 512..1337 100 <- Minus
3L 13021074..13021557 28..511 100 <- Minus
3L 13021628..13021654 1..27 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:55:20 Download gff for LP07155.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13020001..13020826 512..1337 100 <- Minus
3L 13021074..13021557 28..511 100 <- Minus
3L 13021628..13021654 1..27 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:55:20 Download gff for LP07155.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13020001..13020826 512..1337 100 <- Minus
3L 13021074..13021557 28..511 100 <- Minus
3L 13021628..13021654 1..27 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:28:12 Download gff for LP07155.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13013101..13013926 512..1337 100 <- Minus
arm_3L 13014174..13014657 28..511 100 <- Minus
arm_3L 13014728..13014754 1..27 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:26:28 Download gff for LP07155.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13013101..13013926 512..1337 100 <- Minus
3L 13014174..13014657 28..511 100 <- Minus
3L 13014728..13014754 1..27 100   Minus

LP07155.hyp Sequence

Translation from 0 to 1047

> LP07155.hyp
TSNMCDRVREGILVGCGNPLLDISAVVPLNFLQKYSMNEDDAILAEDRHM
PIYGELVEGYQAEFLAGGSVQNSLRIAQWILRQPRVAVFFGCVGEDRYAN
ILKEKAQAAGLDVHYQVKKDVPTGTCAVLITGTHRSLCANLAAANNFTID
HLEEPSNKALVDNAQYYYISGFFLTVNPPSIMQVAATAHAKQRPFLMNLS
APFISQFYMAPLLAALPYVDIIFGNEAEAQAFAEAQQWPSGDLREIGKRL
VAMEKKNPTRPRIAILTQGCDPVLLIQQDSVQEFPVTKLAVHEIVDTNGA
GDAFVGGFLSQFVQGKSLDVCIRCGNYAAGHIIKNPGCTYSGEPEFVE*

LP07155.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:41:10
Subject Length Description Subject Range Query Range Score Percent Strand
AdenoK-PB 345 CG11255-PB 1..345 4..348 1800 100 Plus
AdenoK-PC 345 CG11255-PC 1..345 4..348 1771 98.6 Plus
AdenoK-PA 345 CG11255-PA 1..345 4..348 1771 98.6 Plus
CG3809-PA 396 CG3809-PA 54..393 10..348 707 44 Plus
Ady43A-PA 366 CG1851-PA 87..363 67..338 267 28 Plus

LP07155.pep Sequence

Translation from 10 to 1047

> LP07155.pep
MCDRVREGILVGCGNPLLDISAVVPLNFLQKYSMNEDDAILAEDRHMPIY
GELVEGYQAEFLAGGSVQNSLRIAQWILRQPRVAVFFGCVGEDRYANILK
EKAQAAGLDVHYQVKKDVPTGTCAVLITGTHRSLCANLAAANNFTIDHLE
EPSNKALVDNAQYYYISGFFLTVNPPSIMQVAATAHAKQRPFLMNLSAPF
ISQFYMAPLLAALPYVDIIFGNEAEAQAFAEAQQWPSGDLREIGKRLVAM
EKKNPTRPRIAILTQGCDPVLLIQQDSVQEFPVTKLAVHEIVDTNGAGDA
FVGGFLSQFVQGKSLDVCIRCGNYAAGHIIKNPGCTYSGEPEFVE*

LP07155.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:50:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25174-PA 339 GF25174-PA 1..339 7..345 1570 87 Plus
Dana\GF17233-PA 347 GF17233-PA 5..344 7..345 717 44 Plus
Dana\GF12238-PA 365 GF12238-PA 87..362 64..335 251 28.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:50:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13787-PA 345 GG13787-PA 1..345 1..345 1798 97.1 Plus
Dere\GG18640-PA 397 GG18640-PA 43..394 2..345 728 43.3 Plus
Dere\GG10762-PA 366 GG10762-PA 87..364 64..336 269 28.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:50:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23323-PA 348 GH23323-PA 1..347 1..345 1529 81.3 Plus
Dgri\GH15477-PA 347 GH15477-PA 3..342 5..343 772 44 Plus
Dgri\GH20370-PA 364 GH20370-PA 31..362 10..336 259 27.1 Plus
Dgri\GH22195-PA 341 GH22195-PA 31..339 10..336 224 25.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:18:32
Subject Length Description Subject Range Query Range Score Percent Strand
AdenoK-PB 345 CG11255-PB 1..345 1..345 1800 100 Plus
AdenoK-PC 345 CG11255-PC 1..345 1..345 1771 98.6 Plus
AdenoK-PA 345 CG11255-PA 1..345 1..345 1771 98.6 Plus
CG3809-PA 396 CG3809-PA 54..393 7..345 707 44 Plus
Ady43A-PA 366 CG1851-PA 87..363 64..335 267 28 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:50:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13634-PA 346 GI13634-PA 1..346 1..345 1576 84.4 Plus
Dmoj\GI10274-PA 411 GI10274-PA 69..408 7..345 764 43.7 Plus
Dmoj\GI20045-PA 365 GI20045-PA 87..363 64..336 267 26.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:50:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24870-PA 345 GL24870-PA 1..345 1..345 1644 87.5 Plus
Dper\GL22267-PA 347 GL22267-PA 5..344 7..345 735 44.6 Plus
Dper\GL10944-PA 368 GL10944-PA 36..363 14..335 257 27.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:50:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23538-PA 340 GA23538-PA 1..340 1..345 1609 86.7 Plus
Dpse\GA17700-PA 347 GA17700-PA 5..344 7..345 741 44.6 Plus
Dpse\GA14968-PA 368 GA14968-PA 36..363 14..335 261 27.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:50:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24613-PA 345 GM24613-PA 1..345 1..345 1801 97.4 Plus
Dsec\GM24000-PA 396 GM24000-PA 54..393 7..345 724 43.7 Plus
Dsec\GM20810-PA 366 GM20810-PA 87..364 64..336 267 28.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:50:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12680-PA 345 GD12680-PA 1..345 1..345 1804 97.7 Plus
Dsim\GD18802-PA 347 GD18802-PA 5..344 7..345 725 43.7 Plus
Dsim\GD10267-PA 343 GD10267-PA 87..340 64..335 226 27.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:50:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13971-PA 346 GJ13971-PA 1..346 1..345 1548 82.1 Plus
Dvir\GJ11082-PA 347 GJ11082-PA 5..344 7..345 782 44.9 Plus
Dvir\GJ21287-PA 367 GJ21287-PA 88..364 64..335 296 26.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:50:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17347-PA 345 GK17347-PA 1..345 1..345 1616 86.1 Plus
Dwil\GK11532-PA 354 GK11532-PA 5..319 7..320 767 46.2 Plus
Dwil\GK21524-PA 367 GK21524-PA 87..362 64..335 250 27.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:50:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20080-PA 345 GE20080-PA 1..345 1..345 1800 97.1 Plus
Dyak\GE26161-PA 347 GE26161-PA 5..344 7..345 724 43.1 Plus
Dyak\GE24147-PA 366 GE24147-PA 87..364 64..336 264 28.5 Plus