BDGP Sequence Production Resources |
Search the DGRC for LP07226
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 72 |
Well: | 26 |
Vector: | pOT2 |
Associated Gene/Transcript | mge-RA |
Protein status: | LP07226.pep: gold |
Preliminary Size: | 1192 |
Sequenced Size: | 1079 |
Gene | Date | Evidence |
---|---|---|
CG14981 | 2001-01-01 | Release 2 assignment |
CG14981 | 2002-06-12 | Blastp of sequenced clone |
CG14981 | 2003-01-01 | Sim4 clustering to Release 3 |
mge | 2008-04-29 | Release 5.5 accounting |
mge | 2008-08-15 | Release 5.9 accounting |
mge | 2008-12-18 | 5.12 accounting |
1079 bp (1079 high quality bases) assembled on 2002-06-12
GenBank Submission: AY122211
> LP07226.complete CACTAAGCTCACGAGGAGCATTTTATAAAATCAATTTTTACATAAATTTT AAGCGAACGCGAACGAATCCTCCGCTCAAGCTCAATTAAATGCCAGTGCG AACTGGATTTTGTGAGCGATTCCGGTGATAAGATACTTCCGTGTTCCTTC AAAGGGTTGCTTTAGAGCACAAACCCGCGATTTTCGACCGTGTGCGTTGA TTGAAAGCCGCAAAAGTGGATACCGAAACAGTGAAAATCGAGGATTTGAT GGACTCTGATCCTGAAATCGAGTTCATTGAAAAGGACAGCGGCATGTCGT CGTTAGGCGGCAGCAAGGACGAGACGCCGGAGCGTCGGGCAGTGGCTGCC ACCTCCAATGATCCGCAACGCGAGAACTACGATGATGAGCCCGATGAGAC GGCATCCGAGCGCTTCTGGGGACTAACCGAGATGTTCCCGGAGCCAGTGA GGAATGCAGTCGGCGCCGTGAGCAGCGCCACGGTGAAGAGCGTCAAGGGC TTCTACTCGTTCTCGTGCAACGCCAGCTGGATATTCTTCACCAGCGCGGT TATCCTGTTCGCCCCGGTCATCTTCGAGACGGAGCGCGCCCAGATGGAGG AGCTGCACAAGTCGCAGCAGAAGCAGGTGCTTCTTGGACCCGGCAGTGCG ATGGGTCCTGGAGGGCCGTCGCCCAGCTTACCCTTGATTCGTTAACCATG AGAGACCCCCTACCACATACGCATATTAGCTCTACGATAACCGGCATCGG AAATCCGGAAATTGCCACACGTTAGCTTAAGTTTGTCGATACCAATCAAT CCCAGTCGAAATCGAGCGGTGCAGGACGTCCAGCGATTCCCCCCAATAAA GCAGCCACCCATTAAATGCCACTTCACAGCGCAGCATTTACGCATCCACA CTCTATGAACATCCGGCCCCCAAAAAAAGGACGTCCTCATCAATCGAAAC GAGCCGTTGCAAAACTTCAGATAGGTGTTAGCATTGCAGTTGGCGTACAG TGTATAAACAAGCAACCACTGCGGTTTAAACCAATTAATAAAACTACGTT TATTAATAGTCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mge-RA | 1159 | mge-RA | 31..1095 | 1..1065 | 5325 | 100 | Plus |
mge-RB | 898 | mge-RB | 182..896 | 351..1065 | 3575 | 100 | Plus |
mge.a | 1045 | mge.a | 371..1045 | 387..1061 | 3375 | 100 | Plus |
mge.a | 1045 | mge.a | 21..370 | 1..350 | 1750 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 3907309..3907982 | 1061..387 | 3310 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 3908669..3909018 | 350..1 | 1750 | 100 | Minus |
chr3L | 24539361 | chr3L | 3908452..3908488 | 387..351 | 185 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 3907853..3908531 | 1065..387 | 3395 | 100 | Minus |
3L | 28103327 | 3L | 3909221..3909570 | 350..1 | 1750 | 100 | Minus |
3L | 28103327 | 3L | 3909003..3909039 | 387..351 | 185 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 3907309..3907982 | 387..1061 | 99 | <- | Minus |
chr3L | 3908453..3908488 | 351..386 | 100 | <- | Minus |
chr3L | 3908669..3909018 | 1..350 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mge-RA | 1..447 | 249..695 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mge-RA | 1..447 | 249..695 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mge-RA | 1..447 | 249..695 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mge-RA | 1..447 | 249..695 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mge-RA | 1..447 | 249..695 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mge-RA | 21..1081 | 1..1061 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mge-RA | 21..1081 | 1..1061 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mge-RA | 23..1083 | 1..1061 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mge-RA | 21..1081 | 1..1061 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mge-RA | 23..1083 | 1..1061 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3907857..3908531 | 387..1061 | 100 | <- | Minus |
3L | 3909004..3909039 | 351..386 | 100 | <- | Minus |
3L | 3909221..3909570 | 1..350 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3907857..3908531 | 387..1061 | 100 | <- | Minus |
3L | 3909004..3909039 | 351..386 | 100 | <- | Minus |
3L | 3909221..3909570 | 1..350 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3907857..3908531 | 387..1061 | 100 | <- | Minus |
3L | 3909004..3909039 | 351..386 | 100 | <- | Minus |
3L | 3909221..3909570 | 1..350 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 3907857..3908531 | 387..1061 | 100 | <- | Minus |
arm_3L | 3909004..3909039 | 351..386 | 100 | <- | Minus |
arm_3L | 3909221..3909570 | 1..350 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3907857..3908531 | 387..1061 | 100 | <- | Minus |
3L | 3909004..3909039 | 351..386 | 100 | <- | Minus |
3L | 3909221..3909570 | 1..350 | 100 | Minus |
Translation from 248 to 694
> LP07226.hyp MDSDPEIEFIEKDSGMSSLGGSKDETPERRAVAATSNDPQRENYDDEPDE TASERFWGLTEMFPEPVRNAVGAVSSATVKSVKGFYSFSCNASWIFFTSA VILFAPVIFETERAQMEELHKSQQKQVLLGPGSAMGPGGPSPSLPLIR*
Translation from 248 to 694
> LP07226.pep MDSDPEIEFIEKDSGMSSLGGSKDETPERRAVAATSNDPQRENYDDEPDE TASERFWGLTEMFPEPVRNAVGAVSSATVKSVKGFYSFSCNASWIFFTSA VILFAPVIFETERAQMEELHKSQQKQVLLGPGSAMGPGGPSPSLPLIR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10253-PA | 148 | GF10253-PA | 1..136 | 1..136 | 631 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14239-PA | 158 | GG14239-PA | 11..158 | 1..148 | 733 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15713-PA | 152 | GH15713-PA | 1..152 | 1..148 | 597 | 75.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mge-PA | 148 | CG14981-PA | 1..148 | 1..148 | 766 | 100 | Plus |
mge-PB | 122 | CG14981-PB | 9..122 | 35..148 | 596 | 100 | Plus |
mge-PC | 52 | CG14981-PC | 1..46 | 1..46 | 238 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12768-PA | 150 | GI12768-PA | 1..150 | 1..148 | 591 | 78.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16203-PA | 163 | GL16203-PA | 1..139 | 1..136 | 534 | 74.1 | Plus |
Dper\GL24359-PA | 85 | GL24359-PA | 11..82 | 40..115 | 197 | 43.4 | Plus |
Dper\GL19802-PA | 74 | GL19802-PA | 6..72 | 44..113 | 147 | 45.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13402-PA | 153 | GA13402-PA | 1..153 | 1..148 | 572 | 72.5 | Plus |
Dpse\GA26585-PA | 85 | GA26585-PA | 15..82 | 44..115 | 200 | 48.6 | Plus |
Dpse\GA27201-PA | 74 | GA27201-PA | 6..72 | 44..113 | 145 | 45.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14031-PA | 124 | GM14031-PA | 7..124 | 31..148 | 602 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13312-PA | 124 | GD13312-PA | 11..124 | 35..148 | 600 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16067-PA | 150 | GJ16067-PA | 1..150 | 1..148 | 613 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18035-PA | 155 | GK18035-PA | 1..155 | 1..148 | 587 | 75 | Plus |
Dwil\GK16698-PA | 124 | GK16698-PA | 6..124 | 30..148 | 432 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20667-PA | 158 | GE20667-PA | 11..158 | 1..148 | 746 | 95.9 | Plus |