BDGP Sequence Production Resources |
Search the DGRC for LP07906
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 79 |
Well: | 6 |
Vector: | pOT2 |
Associated Gene/Transcript | CG32447-RB |
Protein status: | LP07906.pep: gold |
Preliminary Size: | 2686 |
Sequenced Size: | 2990 |
Gene | Date | Evidence |
---|---|---|
CG14571 | 2001-01-01 | Release 2 assignment |
CG7155 | 2001-01-01 | Release 2 assignment |
CG32447 | 2002-06-12 | Blastp of sequenced clone |
CG32447 | 2003-01-01 | Sim4 clustering to Release 3 |
CG32447 | 2008-04-29 | Release 5.5 accounting |
CG32447 | 2008-08-15 | Release 5.9 accounting |
CG32447 | 2008-12-18 | 5.12 accounting |
2990 bp (2990 high quality bases) assembled on 2002-06-12
GenBank Submission: AY122212
> LP07906.complete TCGATCGGAGCGAGCGGACGTTTTAGCGCGAGAATCGAGAAGAAGAATTC ATGATCTAGGGCCTGCGAGGACTGAAGAATTTACGAACCTGAACAATCGC GATCGCGAGTGCGTGGTTAGTGTGCGTTTGCAAGAGATGTGCCGCGTTTG ATTATATTGTCAGAGGTCCAGGGCATCGAAGGTCACCACATCCAATGGCC GGTAGACGCCACCTGCTGCTGATCCTGCTGCTGATCATGCAGTTGATCGC CACCACGCCGGCGTCGCGCAGCCTCAGCGTTAATGGCAACAACATTTGGC GGCGGGTGCGCCTGGTGACCAGCCAGGAATCGGATCGCAACGCCTACCAG GTGCTTAAGCCGAGTAGCCGTAATGCCACCAGCACCACCACTACTACCAG CACGACTACAAGTACTACAAGTAGCACCACTAGTACCACTACTCCGGCAG CTCCTCAGACCCAGCGATCTGCCAAACAATTGGATCTCAATTTTCCGGGT GGCAATGTCTCCAGTGCTGCCCGTCTCGAAATGTCGACGGAATTCTTTGT GGTACCCACACTATCGGCCAGCAGTTCTAGCAGCACCACGTCCACCACCA CACCAGCCACGCCCCGTCGGAGTTCAGGGGCGAAGGCGCGAGCAGCCGGC ACCACTGGACGGGTGACTCCCGGGAGCAGCTCCAACAGCACACCGCCCAG TATAGTGTCCACCCACTTGCCCTTCGCGGGACTACGCAAGGAGCCGTGGG TGGTGCCGGTGCTAGTCCTGGCCACCCTCACCATGCTCATGATGGCAGCG TTCGAGATCTTTGTGCTCTTCAAGGCCTGGCGGACGTCCCCGTCGCGTAG GCACCTCTTTCTGGGCCAGATGCTGCTTCTCGGTCTGTTCGCCTGCGCTA GTTTGGGGGCCATCATCACCGCACAGCCCTCGTTGATCAGTTGCGGGGCC ATCCGCTTCGGAGTGGGCGTGGCCTACGCCCTGGTCTTTGCCGCCCTGCT GGTCAAATGCGTATTTCTGATTAGTCTAAATGGAGGGGTGTATCTGCCGG CTCCATACCAGGGATTGCTGCTCCTCTTTGCGCTGCTCATCCAGGTAGCG ATCGGAGGGCAGTGGCTGCTCACCCAACCACCGGAGGTATACACCACCAG TGTGCCTGTGATGGGCAGTGGCTTCCTTAGCACCACGGTGGCCTCACAGA CCAACTACTCGGCACTGTTTTACCCCACGTCCTACACAACGCTGGACGGG ACTCCGGAGATCTACACCCGGATAGCGGCGGTTAGCACCGTACTAATACC GCTCTGCAAGACGCAGTTCTCGGAGCTGCTCTTCTCGCTGATCTACATTG TCTTTCTGATCGTCTTCATCGCCGTGCTAGCCATCAAGTCGCGCGGCATC AGGGACAACTACCGTGAGGCCACCTACATTGGGCTGGCCATCGGAGGAGC CATCCCCATCTGGCTGGGATGGATGCTATGCGGCCTGGCCGTGGCCGAGC GGCACAAGGACGCTTGCGTGGCCTTCGGTCTGGTAGCCACATCCGCCACG GTCTTCTTGGTGATGTTCATGCCCAAGGGCAGGCAACTGGCGGCCATGGG CAAGGAGGGCCTGTACGTGGAGGACCGCGAGGAGCAGTTCAGTTCCCTGA GTCGCGCCGGTTCCGGCTACTCGCCCTCGTTCTTCCACTTCAAGCCCATC AAGTACGGCGTGATGAGCGGCTGCGGACTGCCCAACTCTGCATCCAACAC GGGCCAGGGACTCAGCTCCAAACACTGCTCCAGTGCCAACAATGGAGGTG ATCGGGTTGCTCTGGTCACTGCCGCACCGCCGAGCTATACGCGTATGTAT CACTATTTTCCAGCACACCTGAGTCCGCACCCGTTCTGCTATTATCCTCC CGCACCACCACCACCACTGCCACCGCAACCACCGCCACCACAGCAAGCCG CACCGCCCACGCTCACGCCGTTGACCCTCAAGCAGTTGGGCAACTCGCTA AGCTCCATGACACAAGCGGCGCAGTTGGCCAAAACGCTGCGCTATGCGCC AGGCATGTTTATACGACCAGACGAAACGAATCTTTACACCACGCTGGAGC CCACGTTGAGCAGCAATCCGAATGTGTACTTCCAGCGCAGCGGGGCCGTC CATCCCGGCATCCTGTACTGAGTAATCCCGAGGAGATCCCAAGGAGTGCC GAGCATCGAGAACACTGGAACTGAGTATTTTTTCTTAACTTTAAGGTACG GCTCCCAAGGAGCAGCAATAAGAAAATGATATTCCACGATCATTTCACAT AGTGTAATATTTTTGTCATAACTGCTAAGATCTTTGCATCTAAGTTTAGT AGACTAAGGATGGCCCCACCTGACCCTGGGAATTTTGATATATTCCTATC GGTCGGTCAGAGGGTTCGTGGAAGTTCGTGGATCTGCAGAAAGCAACACC TACATATAGTTTAGCAATATCGACCATCTACACTGGTTACATTTTACACA CTCGCTGTAGCAACGATTCTATCAAATAAGTCCTTGAAGGCCTTGCGATT CTTAAATAATTATACCGAGTTATTTCTGGCTTGTGATTTATTAAAGTAAA TTGTCCCTCAAAAGTTTTGATAGCATTCAAACAGCTCTACTGCTCTGAAA TAACTCAAGAACGCAGGGGCAAACCATGTGGATGAAATAACTTGGCTCGA ATTTGCGTTAAGAGCTTTCAGCTCAATTGTAAAGGCAGTGAGAAGTCCCT GGAATCCACCTGACGCTCGTCGAGTATATTTGTACAGATGTTTTGCCCCT GTGAACACACATACTCCAGTAAGTAATAGTAATAGGCTTAATACCCATTT GACTAGCCAAGTAAAGCGATCGCCTAAGCAAACACGAAATGTTGTACATA CTGCAATGGCCCCGAGCCACACACACACACACTCGGTGAGCAAGCCAATC TCAATAAAAGAAAAGAAGCCGAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 21693483..21695282 | 1800..1 | 9000 | 100 | Minus |
chr3L | 24539361 | chr3L | 21681739..21682660 | 2971..2050 | 4595 | 99.9 | Minus |
chr3L | 24539361 | chr3L | 21683250..21683503 | 2053..1800 | 1270 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 21704548..21706347 | 1800..1 | 9000 | 100 | Minus |
3L | 28110227 | 3L | 21692801..21693724 | 2973..2050 | 4605 | 99.9 | Minus |
3L | 28110227 | 3L | 21694315..21694568 | 2053..1800 | 1270 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 21697648..21699447 | 1800..1 | 9000 | 100 | Minus |
3L | 28103327 | 3L | 21685901..21686824 | 2973..2050 | 4605 | 99.8 | Minus |
3L | 28103327 | 3L | 21687415..21687668 | 2053..1800 | 1270 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 21681739..21682657 | 2053..2971 | 99 | <- | Minus |
chr3L | 21683251..21683502 | 1801..2052 | 84 | <- | Minus |
chr3L | 21693483..21694840 | 443..1800 | 100 | == | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32447-RB | 1..1977 | 195..2171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32447-RB | 1..1977 | 195..2171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32447-RB | 1..1977 | 195..2171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32447-RB | 1..1977 | 195..2171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32447-RB | 1..1977 | 195..2171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32447-RB | 1..2971 | 1..2971 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32447-RB | 1..2971 | 1..2971 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32447-RB | 19..2989 | 1..2971 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32447-RB | 1..2971 | 1..2971 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32447-RB | 19..2989 | 1..2971 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21692803..21693721 | 2053..2971 | 99 | <- | Minus |
3L | 21694316..21694567 | 1801..2052 | 100 | <- | Minus |
3L | 21704548..21706347 | 1..1800 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21692803..21693721 | 2053..2971 | 99 | <- | Minus |
3L | 21694316..21694567 | 1801..2052 | 100 | <- | Minus |
3L | 21704548..21706347 | 1..1800 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21692803..21693721 | 2053..2971 | 99 | <- | Minus |
3L | 21694316..21694567 | 1801..2052 | 100 | <- | Minus |
3L | 21704548..21706347 | 1..1800 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 21685903..21686821 | 2053..2971 | 99 | <- | Minus |
arm_3L | 21687416..21687667 | 1801..2052 | 100 | <- | Minus |
arm_3L | 21697648..21699447 | 1..1800 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21685903..21686821 | 2053..2971 | 99 | <- | Minus |
3L | 21687416..21687667 | 1801..2052 | 100 | <- | Minus |
3L | 21697648..21699447 | 1..1800 | 100 | Minus |
Translation from 194 to 2170
> LP07906.pep MAGRRHLLLILLLIMQLIATTPASRSLSVNGNNIWRRVRLVTSQESDRNA YQVLKPSSRNATSTTTTTSTTTSTTSSTTSTTTPAAPQTQRSAKQLDLNF PGGNVSSAARLEMSTEFFVVPTLSASSSSSTTSTTTPATPRRSSGAKARA AGTTGRVTPGSSSNSTPPSIVSTHLPFAGLRKEPWVVPVLVLATLTMLMM AAFEIFVLFKAWRTSPSRRHLFLGQMLLLGLFACASLGAIITAQPSLISC GAIRFGVGVAYALVFAALLVKCVFLISLNGGVYLPAPYQGLLLLFALLIQ VAIGGQWLLTQPPEVYTTSVPVMGSGFLSTTVASQTNYSALFYPTSYTTL DGTPEIYTRIAAVSTVLIPLCKTQFSELLFSLIYIVFLIVFIAVLAIKSR GIRDNYREATYIGLAIGGAIPIWLGWMLCGLAVAERHKDACVAFGLVATS ATVFLVMFMPKGRQLAAMGKEGLYVEDREEQFSSLSRAGSGYSPSFFHFK PIKYGVMSGCGLPNSASNTGQGLSSKHCSSANNGGDRVALVTAAPPSYTR MYHYFPAHLSPHPFCYYPPAPPPPLPPQPPPPQQAAPPTLTPLTLKQLGN SLSSMTQAAQLAKTLRYAPGMFIRPDETNLYTTLEPTLSSNPNVYFQRSG AVHPGILY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24644-PA | 662 | GF24644-PA | 1..662 | 1..658 | 2822 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13210-PA | 704 | GG13210-PA | 1..704 | 1..658 | 3318 | 91.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15099-PA | 681 | GH15099-PA | 54..681 | 34..658 | 2564 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32447-PB | 658 | CG32447-PB | 1..658 | 1..658 | 3368 | 100 | Plus |
CG32447-PC | 637 | CG32447-PC | 1..637 | 1..658 | 3221 | 96.8 | Plus |
CG32447-PD | 574 | CG32447-PD | 1..562 | 1..567 | 2705 | 95.6 | Plus |
CG32447-PD | 574 | CG32447-PD | 512..574 | 598..658 | 210 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13749-PA | 721 | GI13749-PA | 23..721 | 19..658 | 2496 | 78.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25281-PA | 533 | GL25281-PA | 21..533 | 18..545 | 1811 | 75.8 | Plus |
Dper\GL25282-PA | 597 | GL25282-PA | 7..84 | 542..619 | 428 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16912-PA | 675 | GA16912-PA | 21..675 | 18..658 | 2710 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22118-PA | 706 | GM22118-PA | 1..706 | 1..658 | 3352 | 92.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12096-PA | 724 | GD12096-PA | 1..662 | 1..614 | 3053 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14094-PA | 664 | GJ14094-PA | 24..664 | 16..658 | 2558 | 83.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17129-PA | 678 | GK17129-PA | 29..678 | 28..658 | 2605 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22304-PA | 634 | GE22304-PA | 1..634 | 1..658 | 3228 | 95.1 | Plus |
Dyak\GE22989-PA | 160 | GE22989-PA | 30..160 | 530..658 | 398 | 82.4 | Plus |
Dyak\GE22989-PA | 160 | GE22989-PA | 1..58 | 1..58 | 221 | 96.6 | Plus |
Translation from 194 to 2170
> LP07906.hyp MAGRRHLLLILLLIMQLIATTPASRSLSVNGNNIWRRVRLVTSQESDRNA YQVLKPSSRNATSTTTTTSTTTSTTSSTTSTTTPAAPQTQRSAKQLDLNF PGGNVSSAARLEMSTEFFVVPTLSASSSSSTTSTTTPATPRRSSGAKARA AGTTGRVTPGSSSNSTPPSIVSTHLPFAGLRKEPWVVPVLVLATLTMLMM AAFEIFVLFKAWRTSPSRRHLFLGQMLLLGLFACASLGAIITAQPSLISC GAIRFGVGVAYALVFAALLVKCVFLISLNGGVYLPAPYQGLLLLFALLIQ VAIGGQWLLTQPPEVYTTSVPVMGSGFLSTTVASQTNYSALFYPTSYTTL DGTPEIYTRIAAVSTVLIPLCKTQFSELLFSLIYIVFLIVFIAVLAIKSR GIRDNYREATYIGLAIGGAIPIWLGWMLCGLAVAERHKDACVAFGLVATS ATVFLVMFMPKGRQLAAMGKEGLYVEDREEQFSSLSRAGSGYSPSFFHFK PIKYGVMSGCGLPNSASNTGQGLSSKHCSSANNGGDRVALVTAAPPSYTR MYHYFPAHLSPHPFCYYPPAPPPPLPPQPPPPQQAAPPTLTPLTLKQLGN SLSSMTQAAQLAKTLRYAPGMFIRPDETNLYTTLEPTLSSNPNVYFQRSG AVHPGILY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32447-PB | 658 | CG32447-PB | 1..658 | 1..658 | 3368 | 100 | Plus |
CG32447-PC | 637 | CG32447-PC | 1..637 | 1..658 | 3221 | 96.8 | Plus |
CG32447-PD | 574 | CG32447-PD | 1..562 | 1..567 | 2705 | 95.6 | Plus |
CG32447-PD | 574 | CG32447-PD | 512..574 | 598..658 | 210 | 69.8 | Plus |