LP07955.complete Sequence
1984 bp (1984 high quality bases) assembled on 2001-07-04
GenBank Submission: AY060450
> LP07955.complete
TTACTCTTACCAACGGCCACTGTAATAAAATAAGATAACATCTTCATGGG
ACACTGATAGTGCATAGATAGTGGAAAATTTTTGTCTTAGCGTTGCAAAC
TCGGATGCATCCCATCGCAGATTCTCATGGATGCGGGGAGGGGGCGAGCT
TTTGCAAATATAGTCGCAGGAAGCAAGAAAAATGGTCTGCGCATGGACAG
TGGACTTAAAAATATTGACCACAAGTAAAGCAAGCAAAATAAATTGGACG
AAAATCAGAAACCACAATAGCAGCAACAAATGCCAGGCATGAGCGAGAGG
AAAATAGCCGCAGAACAACGTCAGGTAACCGATATTAACATAACTACCAG
GTGGTGCTGTGGTGCAGTGGTGCAGCGGTGGAGTGGTACGAGTACTGCAA
GCAACACGGCAACCCGCTTTGTCGTCAGACTCGTTAGATAGAAACCCATC
TTCACCCCGCCTTCGAATCCCCAATCCCCCATTCCCCCATTCCCCGATTC
TCCGATTCCAGGCAACTTCCTCCGACGTCAACGGCAATACCCGTTCGTTG
CGGCCAAGTTCTGTGCCGCAATTTGGCCCAAACCCAAACCCAAAGCCAAA
CCACCACAGAGACTTCCTTGTTTCGTGCTAGTCTCGTCTCGTTGGCAGTA
GCACTTTGATGACTTTGGCTATAAGGCCGAGTCGCTCGCTCTTGCCCCAC
CACCACCATCGAGTATAATGGCCAGGCTGTCTCCACCTCCTCCTCCACCC
CATGCAACTCCTCCTCCCCCAATCAACCCACAATTTCTTTTAGCCATGTG
CAGTGGGAAGCACTCTTGCCACGAAGATTCACAGTTTGCTGGCTCTAGCC
AAATGAATTTCAAATTGGAATCCCTTTGGGGTAAAACAATTAACAGCGTT
GTGGTCGATATTCCCACTGCCCGGATTTATTAGCAGTGTTGCAGCTATTT
TTAGGCTCGCAGACACGATGTATAATAATTATTTAACGGCAACGACGCGT
AACTAAATATGTTGCCTCTTTTATACAAGGTATGCACTTCAGGCTGATTA
GCTATTCAAATTATGAATGGCCCGGCTAATCAGCCAATTCTGGATTCTGA
GAACCTCTGAGAACCTCTGCTGTGGCGCCAGCTAATCCGCTGAAAGTTTA
TGGGTGGGAATCTTTTCTTCTCGAGCTGCACAGAATCTTTTTGCATATTA
CCCAACGACCACCACCGGGGTAAAGTACAAAAACAAAAAGTGTTCAATAA
AAAATTGGGAAAAAAGGCATAATCAACGTGCACTGAACTTGGCGTGGGAA
CTACCAACTTTCTGCACCATTTATCAGGTTTTCTGATGACGGCTGTGGCG
CAAAAAGAAAAACGCTCCTGAGCCCACAGGCAGATTGTGAGCATTTACAG
CTGGCTGCAGCTTTCAGTTTTTCCACTACGCAAATCACACCGGAAAAAGT
GCAAAAAACTAGACTGAAGTTCCCACAGTTGACCTTTCTAATTGCCTCTA
GATGTGACTGATGGGTCTCAGATAATTCTCTTCAGAAAAAAATTTGTTCA
AATAAGACTACTTTAGTAAGCAGCAGCTTGATTAGTGCTACTTTGCTATG
GACTCATTAGGATTATTTTACGTTGTATTAATTTTCAGGAACTCCATGCA
ATTAATCTTAAATATAGCTTACCCTTCCAACCTGTGCATTAAATCAATCA
ACGCTTCGGCTATTTGCATTACAGGCGAGATCTTCCTGATGCGACCCCTC
GAGGACATTGCCTTCATCACGCATGTGGGTGATCCGGTGCTGCTCACCGT
AATTGCGGAAGAGGTTAAGGTGGGTCGTGACGAGCCGCCCGCACTGGCCT
CCACGGTCCAATTGGCGTTCTTTCTGCCCGATCGCACCAATTCGCCGCCG
TACTTCGAGAACGATCAGTAAGTACCAGCAGGTTCCCATCGAAGCAGCCG
GGGGGCATACTACATAAAAAAAAAAAAAAAAAAA
LP07955.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 20:27:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cad86C.b | 6153 | Cad86C.b | 1554..1747 | 1724..1917 | 970 | 100 | Plus |
Cad86C.f | 6756 | Cad86C.f | 1554..1747 | 1724..1917 | 970 | 100 | Plus |
Cad86C.d | 6775 | Cad86C.d | 1554..1747 | 1724..1917 | 970 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:58:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 6665605..6667569 | 1..1965 | 9825 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:52:28 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:58:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10840068..10842051 | 1..1984 | 9905 | 99.9 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:49:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 10580899..10582882 | 1..1984 | 9905 | 99.9 | Plus |
Blast to na_te.dros performed 2019-03-15 13:58:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\HeT-A | 5691 | Dyak\HeT-A YAKHETA 5691bp | 4587..4625 | 1426..1464 | 132 | 82.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2752..2888 | 218..349 | 123 | 61.7 | Plus |
LP07955.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:59:35 Download gff for
LP07955.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 6665605..6667569 | 1..1965 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:38:49 Download gff for
LP07955.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4655-RA | 1310..1512 | 1717..1921 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:13:52 Download gff for
LP07955.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cad86C-RC | 1262..1466 | 1717..1923 | 97 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:19:19 Download gff for
LP07955.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cad86C-RE | 1178..1382 | 1717..1923 | 97 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:45:09 Download gff for
LP07955.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4655-RA | 1310..1512 | 1717..1921 | 98 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:47:19 Download gff for
LP07955.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cad86C-RE | 1178..1382 | 1717..1923 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:06:43 Download gff for
LP07955.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4655-RA | 1310..1512 | 1717..1921 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed on 2011-03-16 20:13:52 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-03 22:19:19 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:45:09 Download gff for
LP07955.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4655-RA | 1310..1512 | 1717..1921 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-26 20:47:19 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:59:35 Download gff for
LP07955.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10840068..10842032 | 1..1965 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:59:35 Download gff for
LP07955.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10840068..10842032 | 1..1965 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:59:35 Download gff for
LP07955.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10840068..10842032 | 1..1965 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:19:19 Download gff for
LP07955.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6665790..6667754 | 1..1965 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:22:56 Download gff for
LP07955.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10580899..10582863 | 1..1965 | 100 | | Plus |
LP07955.pep Sequence
Translation from 1597 to 1920
> LP07955.pep
MDSLGLFYVVLIFRNSMQLILNIAYPSNLCIKSINASAICITGEIFLMRP
LEDIAFITHVGDPVLLTVIAEEVKVGRDEPPALASTVQLAFFLPDRTNSP
PYFENDQ*
LP07955.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:57:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF17906-PA | 478 | GF17906-PA | 413..478 | 42..107 | 344 | 98.5 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:57:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG17727-PA | 499 | GG17727-PA | 434..499 | 42..107 | 354 | 98.5 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:57:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH18062-PA | 373 | GH18062-PA | 308..373 | 42..107 | 323 | 90.9 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:10:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cad86C-PG | 1008 | CG42601-PG | 422..486 | 42..106 | 331 | 98.5 | Plus |
Cad86C-PE | 1915 | CG42601-PE | 394..458 | 42..106 | 331 | 98.5 | Plus |
Cad86C-PD | 1943 | CG42601-PD | 422..486 | 42..106 | 331 | 98.5 | Plus |
Cad86C-PC | 1943 | CG42601-PC | 422..486 | 42..106 | 331 | 98.5 | Plus |
Cad86C-PF | 1949 | CG42601-PF | 422..486 | 42..106 | 331 | 98.5 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:57:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI23741-PA | 454 | GI23741-PA | 389..454 | 42..107 | 323 | 92.4 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:57:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL21919-PA | 1831 | GL21919-PA | 379..444 | 42..107 | 350 | 97 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:57:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA26445-PA | 1912 | GA26445-PA | 379..444 | 42..107 | 350 | 97 | Plus |
Dpse\GA26445-PB | 1841 | GA26445-PB | 388..453 | 42..107 | 350 | 97 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:57:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM23901-PA | 502 | GM23901-PA | 437..502 | 42..107 | 355 | 98.5 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:57:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD18713-PA | 503 | GD18713-PA | 438..503 | 42..107 | 354 | 98.5 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:57:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ10587-PA | 1838 | GJ10587-PA | 308..372 | 42..106 | 334 | 93.8 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:57:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK13902-PA | 439 | GK13902-PA | 374..439 | 42..107 | 334 | 95.5 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:57:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE26052-PA | 506 | GE26052-PA | 441..506 | 42..107 | 357 | 98.5 | Plus |
LP07955.hyp Sequence
Translation from 1597 to 1920
> LP07955.hyp
MDSLGLFYVVLIFRNSMQLILNIAYPSNLCIKSINASAICITGEIFLMRP
LEDIAFITHVGDPVLLTVIAEEVKVGRDEPPALASTVQLAFFLPDRTNSP
PYFENDQ*
LP07955.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:01:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cad86C-PG | 1008 | CG42601-PG | 422..486 | 42..106 | 331 | 98.5 | Plus |
Cad86C-PE | 1915 | CG42601-PE | 394..458 | 42..106 | 331 | 98.5 | Plus |
Cad86C-PD | 1943 | CG42601-PD | 422..486 | 42..106 | 331 | 98.5 | Plus |
Cad86C-PC | 1943 | CG42601-PC | 422..486 | 42..106 | 331 | 98.5 | Plus |
Cad86C-PF | 1949 | CG42601-PF | 422..486 | 42..106 | 331 | 98.5 | Plus |