BDGP Sequence Production Resources |
Search the DGRC for LP07963
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 79 |
Well: | 63 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8036-RB |
Protein status: | LP07963.pep: gold |
Sequenced Size: | 2239 |
Gene | Date | Evidence |
---|---|---|
CG8036 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8036 | 2004-10-02 | Blastp of sequenced clone |
CG8036 | 2008-04-29 | Release 5.5 accounting |
CG8036 | 2008-08-15 | Release 5.9 accounting |
CG8036 | 2008-12-18 | 5.12 accounting |
2239 bp (2239 high quality bases) assembled on 2004-10-02
GenBank Submission: BT016067
> LP07963.complete CAGAAGCCGGCAGCAGTGGTCCGTTGATAACTCCGACTCGAGCTACTTAT CCACCACGTCGATACTCTTGTCTGTCTATTGCAAACATAGAGGAGTCACC CTTTGGCTAACGAATCCGAAACTCCCGAGTTTTGTTGTGCAACATATCAA AAACCGCATTTGTTCGGATCCAATTTACATTCGCATTTCAAAGATGTCGT ACCACAAGCCCGAAGCTAAGACCGTCCAGGATCTGAAAGATCTGGCCCAG AAACTGCGAATTCACTCTATCAACGCCACCCAGGCCTCCAAATCGGGCCA TCCCACATCATGTGCCTCGATCGCTGAGATCATGTCCGTGCTGTTCTTCC AGCAGCTGCGCCTGAACCTGAAGCACCCACGCGATCCCTCCAGCGATCGC TTCATCCTGTCCAAAGGACACGCTGCTCCCATTCTGTATGCCGCCTGGGC TGAGGCTGGTCTCTTCCCCATCGCGGATCTGAACAACCTGCGCAAGATCG ACAGCGATCTGGAGGGTCACCCGACGCCTCGTCTGAACTTCATCGATGTG GGCACTGGATCCCTGGGACAGGGTGTCGCCGTCGGCGCTGGCATGGCCTA TGTGGGCAAGAACTTCGACAAGGCCGACTACCGCACCTACGTGGTGGTGG GTGATGGTGAGTCCGCCGAGGGTTCCATCTGGGAGTCGCTGCACTTTGCC GGCCACTATAAACTGGACAACCTTTGCGTGATCTTTGATGTGAACCGCTT GGGCCAGTCGGAGGCCACCTCCCTGCAGCATAAGCTGGATGTTTACCGTG ATCGTCTGGAGGCCTTCGGCTTTAATGCCGTCGTTGTCGATGGTCATGAT GTCGAGGAATTGAGCAAGGCTTTCCATTGTGCTGCAATCACCAAGAACAA GCCCACCGCCATCATTGCAAAGACGTTCAAGGGCAGGGACTTCCCCAACA TCGAGGATTTGGACAACTGGCACGGCAAGCCACTGGGCGACAAGGCCGCC GAAGTGGTGAAGCATCTGGAGGGACTGATTGTCAACAAGAACGTCAAGCT GACCCCTAAGCCGGTGCCCAAGACTGGTGCTGCTCCCGACGTGGACATCA ACAACATTAAGTTGAGCTCGCCACCCGCCTACAAGCTGGGTGATTCCATT GCCACCCGTTTGGCCTATGGAACAGCTCTGGCCAAGATTGGCCAGAACAA CCTGCGTGTTGTTGCCCTAGACGGAGACACCAAGAACTCAACTTTCTCCG ACAAGCTGAAGAACCTCGACCCGCAGCGCTACATTGAGTGCTTCATCGCT GAGCAGAATCTTGTGGGAGTGGCCGTTGGAGCCGCCTGCCGTCGCCGCAC TGTGGCCTTTGTGTCCACCTTTGCCACCTTCTTCACCCGTGCCTTCGATC AGATCCGTATGGGCGCCATCTCGCAGACGAACGTTAACTTTGTGGGCTCC CACTGCGGCTGCAGTATCGGTGAGGATGGTCCTTCGCAGATGGGTCTGGA GGACATTGCCATGTTCCGCACCATTCCGGGCAGCACCATCTTCTATCCCT CCGATGCAGTGAGCACGGAGCGTGCCGTCGAACTGGCCGCCAACACCAAG GGTGTCTGCTTCATCCGTACGTCCCGTCCCAACACCTGTGTGATCTACGA CAACGAGGAACCCTTCACCATTGGCCGCGGCAAGGTGGTGCGCCAAAAGA GCTCCGACGAGGTGCTTCTGATCGGAGCTGGAATCACTTTGTACGAGTGC CTGGCTGCCGCCGATCAGCTGGAGAAGAACTGCATCACCGTCCGTGTGAT CGATCCGTTCACCGTGAAGCCATTGGACGCCGAGCTGATCATCGAGCACG GCAAGCAGTGCGGAGGACGCGTAGTCGTCGTGGAGGATCACTACCAGCAA GGAGGCCTGGGTGAAGCTGTGCTGAGTGCCCTGGCTGGCGAGCGCAACTT CGTTGTCAAGCACTTGTACGTGCCCACCGTGCCACGTTCGGGTCCTCCGT CGGTACTCATCGATATGTTCGGCATCTCCGCACGTCACGTCGTCAACGCC GTTAACGAGATCCTCAAGGATTAGGGGACCAGTCGTGATCTGGCTACATT CATTTACCGCCTACAGGAATTCCCCCAGTTACTACTTACTTCCAATATTA CCATTCCCTCTAAGATTGTTAATTGCTTCATTGATTTGAACCTTACATCA TGGAAATAAAATATCTTTAATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 4497682..4499286 | 297..1901 | 8010 | 99.9 | Plus |
chr3R | 27901430 | chr3R | 4499350..4499674 | 1897..2221 | 1595 | 99.4 | Plus |
chr3R | 27901430 | chr3R | 4495613..4495909 | 1..297 | 1470 | 99.7 | Plus |
chr3L | 24539361 | chr3L | 18282047..18282734 | 1962..1275 | 1070 | 77 | Minus |
chr3L | 24539361 | chr3L | 18283319..18283841 | 745..223 | 1010 | 79.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 8671710..8673314 | 297..1901 | 8010 | 99.9 | Plus |
3R | 32079331 | 3R | 8673378..8673707 | 1897..2226 | 1650 | 100 | Plus |
3R | 32079331 | 3R | 8669632..8669928 | 1..297 | 1485 | 100 | Plus |
3L | 28110227 | 3L | 18292405..18293092 | 1962..1275 | 1100 | 77.3 | Minus |
3L | 28110227 | 3L | 18293677..18294199 | 745..223 | 1010 | 79.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 8412541..8414145 | 297..1901 | 8010 | 99.9 | Plus |
3R | 31820162 | 3R | 8414209..8414538 | 1897..2226 | 1650 | 100 | Plus |
3R | 31820162 | 3R | 8410463..8410759 | 1..297 | 1485 | 100 | Plus |
3L | 28103327 | 3L | 18286777..18287299 | 745..223 | 1010 | 79.5 | Minus |
3L | 28103327 | 3L | 18285850..18286192 | 1617..1275 | 845 | 83 | Minus |
3L | 28103327 | 3L | 18285646..18285788 | 1821..1679 | 220 | 76.9 | Minus |
3L | 28103327 | 3L | 18285505..18285593 | 1962..1874 | 175 | 79.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 4495613..4495909 | 1..297 | 99 | -> | Plus |
chr3R | 4497683..4499281 | 298..1896 | 100 | -> | Plus |
chr3R | 4499350..4499674 | 1897..2221 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8036-RC | 1..1881 | 194..2074 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8036-RC | 1..1881 | 194..2074 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8036-RB | 1..1881 | 194..2074 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8036-RC | 1..1881 | 194..2074 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8036-RB | 1..1881 | 194..2074 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8036-RC | 1..2221 | 1..2221 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8036-RC | 1..2221 | 1..2221 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8036-RB | 273..2493 | 1..2221 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8036-RC | 1..2221 | 1..2221 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8036-RB | 273..2493 | 1..2221 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8669632..8669928 | 1..297 | 100 | -> | Plus |
3R | 8671711..8673309 | 298..1896 | 100 | -> | Plus |
3R | 8673378..8673702 | 1897..2221 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8669632..8669928 | 1..297 | 100 | -> | Plus |
3R | 8671711..8673309 | 298..1896 | 100 | -> | Plus |
3R | 8673378..8673702 | 1897..2221 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8669632..8669928 | 1..297 | 100 | -> | Plus |
3R | 8671711..8673309 | 298..1896 | 100 | -> | Plus |
3R | 8673378..8673702 | 1897..2221 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 4495354..4495650 | 1..297 | 100 | -> | Plus |
arm_3R | 4497433..4499031 | 298..1896 | 100 | -> | Plus |
arm_3R | 4499100..4499424 | 1897..2221 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8410463..8410759 | 1..297 | 100 | -> | Plus |
3R | 8412542..8414140 | 298..1896 | 100 | -> | Plus |
3R | 8414209..8414533 | 1897..2221 | 100 | Plus |
Translation from 0 to 2073
> LP07963.hyp RSRQQWSVDNSDSSYLSTTSILLSVYCKHRGVTLWLTNPKLPSFVVQHIK NRICSDPIYIRISKMSYHKPEAKTVQDLKDLAQKLRIHSINATQASKSGH PTSCASIAEIMSVLFFQQLRLNLKHPRDPSSDRFILSKGHAAPILYAAWA EAGLFPIADLNNLRKIDSDLEGHPTPRLNFIDVGTGSLGQGVAVGAGMAY VGKNFDKADYRTYVVVGDGESAEGSIWESLHFAGHYKLDNLCVIFDVNRL GQSEATSLQHKLDVYRDRLEAFGFNAVVVDGHDVEELSKAFHCAAITKNK PTAIIAKTFKGRDFPNIEDLDNWHGKPLGDKAAEVVKHLEGLIVNKNVKL TPKPVPKTGAAPDVDINNIKLSSPPAYKLGDSIATRLAYGTALAKIGQNN LRVVALDGDTKNSTFSDKLKNLDPQRYIECFIAEQNLVGVAVGAACRRRT VAFVSTFATFFTRAFDQIRMGAISQTNVNFVGSHCGCSIGEDGPSQMGLE DIAMFRTIPGSTIFYPSDAVSTERAVELAANTKGVCFIRTSRPNTCVIYD NEEPFTIGRGKVVRQKSSDEVLLIGAGITLYECLAAADQLEKNCITVRVI DPFTVKPLDAELIIEHGKQCGGRVVVVEDHYQQGGLGEAVLSALAGERNF VVKHLYVPTVPRSGPPSVLIDMFGISARHVVNAVNEILKD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8036-PC | 626 | CG8036-PC | 1..626 | 65..690 | 3242 | 100 | Plus |
CG8036-PB | 626 | CG8036-PB | 1..626 | 65..690 | 3242 | 100 | Plus |
CG8036-PD | 580 | CG8036-PD | 1..580 | 111..690 | 3009 | 100 | Plus |
CG5103-PA | 623 | CG5103-PA | 1..622 | 65..689 | 2463 | 73.6 | Plus |
Translation from 193 to 2073
> LP07963.pep MSYHKPEAKTVQDLKDLAQKLRIHSINATQASKSGHPTSCASIAEIMSVL FFQQLRLNLKHPRDPSSDRFILSKGHAAPILYAAWAEAGLFPIADLNNLR KIDSDLEGHPTPRLNFIDVGTGSLGQGVAVGAGMAYVGKNFDKADYRTYV VVGDGESAEGSIWESLHFAGHYKLDNLCVIFDVNRLGQSEATSLQHKLDV YRDRLEAFGFNAVVVDGHDVEELSKAFHCAAITKNKPTAIIAKTFKGRDF PNIEDLDNWHGKPLGDKAAEVVKHLEGLIVNKNVKLTPKPVPKTGAAPDV DINNIKLSSPPAYKLGDSIATRLAYGTALAKIGQNNLRVVALDGDTKNST FSDKLKNLDPQRYIECFIAEQNLVGVAVGAACRRRTVAFVSTFATFFTRA FDQIRMGAISQTNVNFVGSHCGCSIGEDGPSQMGLEDIAMFRTIPGSTIF YPSDAVSTERAVELAANTKGVCFIRTSRPNTCVIYDNEEPFTIGRGKVVR QKSSDEVLLIGAGITLYECLAAADQLEKNCITVRVIDPFTVKPLDAELII EHGKQCGGRVVVVEDHYQQGGLGEAVLSALAGERNFVVKHLYVPTVPRSG PPSVLIDMFGISARHVVNAVNEILKD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18452-PA | 626 | GF18452-PA | 1..625 | 1..625 | 3105 | 90.7 | Plus |
Dana\GF10824-PA | 623 | GF10824-PA | 1..622 | 1..625 | 2442 | 71.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11729-PA | 626 | GG11729-PA | 1..626 | 1..626 | 3318 | 99 | Plus |
Dere\GG15748-PA | 623 | GG15748-PA | 1..622 | 1..625 | 2551 | 73.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17621-PA | 626 | GH17621-PA | 1..625 | 1..625 | 2998 | 87.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8036-PC | 626 | CG8036-PC | 1..626 | 1..626 | 3242 | 100 | Plus |
CG8036-PB | 626 | CG8036-PB | 1..626 | 1..626 | 3242 | 100 | Plus |
CG8036-PD | 580 | CG8036-PD | 1..580 | 47..626 | 3009 | 100 | Plus |
CG5103-PA | 623 | CG5103-PA | 1..622 | 1..625 | 2463 | 73.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22533-PA | 626 | GI22533-PA | 1..625 | 1..625 | 2902 | 84.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23966-PA | 626 | GL23966-PA | 1..625 | 1..625 | 3047 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26462-PA | 626 | GA26462-PA | 1..625 | 1..625 | 3044 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23748-PA | 535 | GM23748-PA | 47..535 | 138..626 | 2598 | 99.2 | Plus |
Dsec\GM14947-PA | 623 | GM14947-PA | 1..622 | 1..625 | 2547 | 73.8 | Plus |
Dsec\GM23748-PA | 535 | GM23748-PA | 1..35 | 1..35 | 180 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18560-PA | 626 | GD18560-PA | 1..626 | 1..626 | 3329 | 99.4 | Plus |
Dsim\GD12349-PA | 623 | GD12349-PA | 1..622 | 1..625 | 2553 | 74.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10136-PA | 626 | GJ10136-PA | 1..625 | 1..625 | 2990 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13217-PA | 626 | GK13217-PA | 1..625 | 1..625 | 3018 | 89.4 | Plus |