BDGP Sequence Production Resources |
Search the DGRC for LP08070
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 80 |
Well: | 70 |
Vector: | pOT2 |
Associated Gene/Transcript | Amyrel-RA |
Protein status: | LP08070.pep: gold |
Preliminary Size: | 1598 |
Sequenced Size: | 1570 |
Gene | Date | Evidence |
---|---|---|
CG8221 | 2001-01-01 | Release 2 assignment |
CG8221 | 2001-07-04 | Blastp of sequenced clone |
CG8221 | 2003-01-01 | Sim4 clustering to Release 3 |
Amyrel | 2008-04-29 | Release 5.5 accounting |
Amyrel | 2008-08-15 | Release 5.9 accounting |
Amyrel | 2008-12-18 | 5.12 accounting |
1570 bp (1570 high quality bases) assembled on 2001-07-04
GenBank Submission: AY052055
> LP08070.complete TCATGTTCAAGTTCGCTTTGACCCTGACGCTCTGCTTGGCGGGCAGCCTT TCGCTGGCCCAGCACAATCCCCATTGGTGGGGCAATCGCAACACCATCGT CCACTTGTTCGAGTGGAAGTGGTCGGACATTGCCCAGGAGTGTGAGAGTT TTCTCGGACCTCGAGGATTCGCCGGCGTTCAAGTGAGCCCCGTTAATGAG AACATCTTATCGGCGGGTCGTCCGTGGTGGGAGCGATATCAACCCATCTC GTACAAGCTGACCACTCGGTCTGGTAATGAGGAGGAATTTGGTGACATGG TCCGTCGTTGCAACGATGTGGGTGTTCGTATCTATGTGGATGTGCTGTTG AACCACATGTCCGGAGATTTTGACGGTGTGGCTGTGGGCACTGCTGGAAC AGAGGCGGAACCCAGTAAGAAATCCTTCCCAGGAGTTCCATACACCGCAC AGGACTTCCATCCCACCTGCGAGATTACCGACTGGAACGATCGCTTCCAG GTGCAACAGTGCGAACTGGTTGGCCTCAAGGATCTTGACCAGAGCAGCGA CTGGGTGAGGAGCAAGCTAATTGAGTTCCTGGATCACCTCATCGAACTGG GTGTTGCTGGCTTCCGGGTGGATGCCGCCAAGCATATGGCATCGGAAGAT CTAGAGTACATCTACAGCAGCCTGAGCAACCTGAACATCGATCACGGCTT TCCTCACAACTCCCGTCCCTTCATCTTCCAGGAGGTAATTGATCACGGTC ACGAAACCGTCTCCCGTGATGAGTACAAGGATCTGGGTGCCGTCACCGAG TTCCGATTCTCCGAGGAGATTGGCAACGCCTTCCGTGGCAACAACGCACT GAAATGGCTGCAGAGCTGGGGAACCGATTGGGGATTCTTGCCCTCGGGTC AGGCCTTGACCTTTGTGGACAACCACGATAACCAGCGAGACGCGGGTGCC GTGCTGAACTACAAGTCCCCCAGGCAGTACAAAATGGCAACCGCCTTCCA TTTGGCCTATCCCTACGGCATCAGTCGGGTGATGAGCTCATTCGCCTTCG ATGACCACGATACCCCGCCGCCGCAGGATGCGCAGGAGAGAATAATTTCA CCCGAGTTCGATGCGGATGGAGCCTGTGTGAATGGCTGGATTTGCGAGCA TCGTTGGCGTCAGATCTACGCGATGGTGGGCTTCAAGAACGCCGTTCGGG ATACGGAGATCACCGGCTGGTGGGACAATGGAGACAACCAGATCTCCTTC TGTCGCGGCAACAAGGGCTTCCTGGCTATCAACAACAACCTGTACGATTT GTCGCAGGATCTGAATACCTGTCTGCCTGCCGGAACCTACTGCGATGTGA TTTCCGGCAGCCTGATCGACGGATCCTGCACCGGCAAATCGGTCACTGTG AACGAGAATGGCTATGGCTATATACACATCGGATCCGATGACTTCGACGG TGTACTGGCCCTGCATGTGGATGCCAAAGTTTAAGTAAAGGTAACACAGA AATCTGGGCTTTATTTTTGTCTCAAATTACAATAAAAACGAACGCACATA AAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 16652292..16653188 | 1551..655 | 4485 | 100 | Minus |
2R | 25260384 | 2R | 16653243..16653898 | 656..1 | 3280 | 100 | Minus |
2R | 25260384 | 2R | 17121112..17121250 | 363..225 | 155 | 74.1 | Minus |
2R | 25260384 | 2R | 17120183..17120252 | 1286..1217 | 140 | 80 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 12538287..12539179 | 657..1549 | 98 | <- | Minus |
chr2R | 12539236..12539891 | 1..656 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Amyrel-RA | 1..1482 | 3..1484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Amyrel-RA | 1..1482 | 3..1484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Amyrel-RA | 1..1482 | 3..1484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Amyrel-RA | 1..1482 | 3..1484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Amyrel-RA | 1..1482 | 3..1484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Amyrel-RA | 1..1549 | 1..1549 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Amyrel-RA | 1..1549 | 1..1549 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Amyrel-RA | 1..1549 | 1..1549 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Amyrel-RA | 1..1549 | 1..1549 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Amyrel-RA | 1..1549 | 1..1549 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16651095..16651987 | 657..1549 | 100 | <- | Minus |
2R | 16652044..16652699 | 1..656 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16651095..16651987 | 657..1549 | 100 | <- | Minus |
2R | 16652044..16652699 | 1..656 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16651095..16651987 | 657..1549 | 100 | <- | Minus |
2R | 16652044..16652699 | 1..656 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 12538600..12539492 | 657..1549 | 100 | <- | Minus |
arm_2R | 12539549..12540204 | 1..656 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16652294..16653186 | 657..1549 | 100 | <- | Minus |
2R | 16653243..16653898 | 1..656 | 100 | Minus |
Translation from 2 to 1483
> LP08070.pep MFKFALTLTLCLAGSLSLAQHNPHWWGNRNTIVHLFEWKWSDIAQECESF LGPRGFAGVQVSPVNENILSAGRPWWERYQPISYKLTTRSGNEEEFGDMV RRCNDVGVRIYVDVLLNHMSGDFDGVAVGTAGTEAEPSKKSFPGVPYTAQ DFHPTCEITDWNDRFQVQQCELVGLKDLDQSSDWVRSKLIEFLDHLIELG VAGFRVDAAKHMASEDLEYIYSSLSNLNIDHGFPHNSRPFIFQEVIDHGH ETVSRDEYKDLGAVTEFRFSEEIGNAFRGNNALKWLQSWGTDWGFLPSGQ ALTFVDNHDNQRDAGAVLNYKSPRQYKMATAFHLAYPYGISRVMSSFAFD DHDTPPPQDAQERIISPEFDADGACVNGWICEHRWRQIYAMVGFKNAVRD TEITGWWDNGDNQISFCRGNKGFLAINNNLYDLSQDLNTCLPAGTYCDVI SGSLIDGSCTGKSVTVNENGYGYIHIGSDDFDGVLALHVDAKV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\Amyc6-PA | 493 | GF13458-PA | 1..493 | 1..493 | 2437 | 88.6 | Plus |
Dana\Amy58-PA | 494 | GF18843-PA | 2..494 | 4..493 | 1588 | 60.2 | Plus |
Dana\Amy35-PA | 494 | GF18844-PA | 2..494 | 4..493 | 1585 | 60 | Plus |
Dana\Amy4N-PA | 495 | GF13835-PA | 3..495 | 5..493 | 1564 | 60.4 | Plus |
Dana\Amyc1-PA | 494 | GF12581-PA | 3..494 | 1..493 | 1555 | 58.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\Amyrel-PA | 493 | GG22255-PA | 1..493 | 1..493 | 2577 | 95.9 | Plus |
Dere\Amy-p-PA | 494 | GG22216-PA | 2..494 | 4..493 | 1571 | 59.8 | Plus |
Dere\Amy-d-PA | 494 | GG20663-PA | 2..494 | 4..493 | 1566 | 59.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\Amyrel-PA | 490 | GH22708-PA | 2..490 | 6..493 | 2119 | 78.7 | Plus |
Dgri\GH21468-PA | 538 | GH21468-PA | 52..538 | 10..493 | 1541 | 58.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Amyrel-PA | 493 | CG8221-PA | 1..493 | 1..493 | 2697 | 100 | Plus |
Amy-p-PB | 494 | CG18730-PB | 8..494 | 10..493 | 1582 | 60.5 | Plus |
Amy-p-PA | 494 | CG18730-PA | 8..494 | 10..493 | 1582 | 60.5 | Plus |
Amy-d-PA | 494 | CG17876-PA | 18..494 | 19..493 | 1579 | 61.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18495-PA | 490 | GI18495-PA | 2..490 | 6..493 | 2198 | 81.6 | Plus |
Dmoj\GI19946-PA | 494 | GI19946-PA | 17..494 | 22..493 | 1553 | 60.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11824-PA | 448 | GL11824-PA | 1..448 | 1..493 | 1987 | 73.7 | Plus |
Dper\Amy4-PA | 494 | GL20050-PA | 3..494 | 6..493 | 1578 | 60.3 | Plus |
Dper\Amy2-PA | 494 | GL20058-PA | 3..494 | 6..493 | 1551 | 59.5 | Plus |
Dper\GL20056-PA | 309 | GL20056-PA | 3..254 | 6..257 | 872 | 63.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\Amyrel-PA | 494 | GA20907-PA | 1..494 | 1..493 | 2268 | 82.4 | Plus |
Dpse\Amy2-PA | 494 | GA24912-PA | 3..494 | 6..493 | 1580 | 60.3 | Plus |
Dpse\Amy1-PA | 494 | GA24265-PA | 3..494 | 6..493 | 1580 | 60.3 | Plus |
Dpse\Amy3-PA | 262 | GA24911-PA | 10..262 | 231..493 | 699 | 53.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\Amyrel-PA | 493 | GM20043-PA | 1..493 | 1..493 | 2632 | 98.6 | Plus |
Dsec\Amy-d-PA | 474 | GM21759-PA | 2..474 | 4..493 | 1474 | 56.8 | Plus |
Dsec\Amy-p-PA | 485 | GM20004-PA | 2..485 | 4..493 | 1471 | 57.6 | Plus |
Dsec\GM23222-PA | 173 | GM23222-PA | 2..121 | 4..122 | 422 | 64.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\Amyrel-PA | 493 | GD25526-PA | 1..493 | 1..493 | 2635 | 98.8 | Plus |
Dsim\Amy-d-PA | 494 | GD11250-PA | 2..494 | 4..493 | 1576 | 60 | Plus |
Dsim\Amy-p-PA | 234 | GD25494-PA | 2..234 | 4..237 | 753 | 61.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Amyrel-PA | 490 | GJ21358-PA | 2..490 | 6..493 | 2207 | 81.8 | Plus |
Dvir\Amy-PA | 494 | GJ17794-PA | 16..494 | 17..493 | 1567 | 59.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\Amyrel-PA | 460 | GK10730-PA | 1..459 | 2..460 | 2127 | 82.1 | Plus |
Dwil\GK21763-PA | 494 | GK21763-PA | 3..494 | 4..493 | 1614 | 61.5 | Plus |
Dwil\GK21544-PA | 494 | GK21544-PA | 3..494 | 4..493 | 1614 | 61.5 | Plus |
Dwil\GK21545-PA | 286 | GK21545-PA | 1..286 | 212..493 | 861 | 59.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Amyrel-PA | 493 | GE14048-PA | 1..493 | 1..493 | 2594 | 96.6 | Plus |
Dyak\Amy-d-PA | 494 | GE11648-PA | 2..494 | 4..493 | 1562 | 59.6 | Plus |
Dyak\Amy-p-PA | 528 | GE14213-PA | 2..528 | 4..493 | 1502 | 55.4 | Plus |
Translation from 2 to 1483
> LP08070.hyp MFKFALTLTLCLAGSLSLAQHNPHWWGNRNTIVHLFEWKWSDIAQECESF LGPRGFAGVQVSPVNENILSAGRPWWERYQPISYKLTTRSGNEEEFGDMV RRCNDVGVRIYVDVLLNHMSGDFDGVAVGTAGTEAEPSKKSFPGVPYTAQ DFHPTCEITDWNDRFQVQQCELVGLKDLDQSSDWVRSKLIEFLDHLIELG VAGFRVDAAKHMASEDLEYIYSSLSNLNIDHGFPHNSRPFIFQEVIDHGH ETVSRDEYKDLGAVTEFRFSEEIGNAFRGNNALKWLQSWGTDWGFLPSGQ ALTFVDNHDNQRDAGAVLNYKSPRQYKMATAFHLAYPYGISRVMSSFAFD DHDTPPPQDAQERIISPEFDADGACVNGWICEHRWRQIYAMVGFKNAVRD TEITGWWDNGDNQISFCRGNKGFLAINNNLYDLSQDLNTCLPAGTYCDVI SGSLIDGSCTGKSVTVNENGYGYIHIGSDDFDGVLALHVDAKV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Amyrel-PA | 493 | CG8221-PA | 1..493 | 1..493 | 2697 | 100 | Plus |
Amy-p-PB | 494 | CG18730-PB | 8..494 | 10..493 | 1582 | 60.5 | Plus |
Amy-p-PA | 494 | CG18730-PA | 8..494 | 10..493 | 1582 | 60.5 | Plus |
Amy-d-PA | 494 | CG17876-PA | 18..494 | 19..493 | 1579 | 61.2 | Plus |