BDGP Sequence Production Resources |
Search the DGRC for LP08082
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 80 |
Well: | 82 |
Vector: | pOT2 |
Associated Gene/Transcript | Ranbp9-RA |
Protein status: | LP08082.pep: gold |
Preliminary Size: | 3345 |
Sequenced Size: | 3329 |
Gene | Date | Evidence |
---|---|---|
CG5252 | 2002-06-19 | Blastp of sequenced clone |
CG5252 | 2003-01-01 | Sim4 clustering to Release 3 |
Ranbp9 | 2008-04-29 | Release 5.5 accounting |
Ranbp9 | 2008-08-15 | Release 5.9 accounting |
Ranbp9 | 2008-12-18 | 5.12 accounting |
3329 bp (3329 high quality bases) assembled on 2002-06-19
GenBank Submission: AY128454
> LP08082.complete CAAGAATCCTTTTTAAAAATCGATTACTATCCAATCGTAAGTTTGTCATC ACTAGTTTCGCACGAAGCAGTCTTGCAAAACGCCCGTTGACTACATGTGA TAGCGCCGCGCCGGCTTCTTTTGTGCGAATTTGGGCATTACGAATTAATT TATTTCGAACCACGGCCGAAGAATGTCGCTGCAATTCCAAAACGACTGCG GGGACTCCGTTAAGCAAGCCATCATCGAGGAGCTGCAGAACCTACTTAGC TCGGACACAGGAGTCCTGCAGCAGACAGAAAAGAGGATCAAGCAGCTGGA GTACACGGAAGGCTATGGCGTCTACCTGTCCGAGATCATTATGAACCAGG CGCACGAGCTGCCACTCCGTCAAATCGCGATCGTGATGCTCACTCGTTAC GTGGAGAACCACTGGACGGATGACGATGATGTTAAAAGGAAAGCCAACGG TTGTATGGCCAGCGAGCAGGCCAAGCGAACCATACGAAACATTCTGCCAA ACGGACTGTATGATCCCAATTCAAAGATACGCTCCTCAGTCGCGCATACC ATCTCCACCATAGCCGCCACGGATTACCCACATTGTTGGGCGGAGCTGTT CGACATCATTGTCAAATGCCTGGGCGGCAATGAGGATTCCATACACGGTG CCATGCAGGTGCTGCAGGATTTCAGCTACGACGTGGAGCAAATCAAGGAA CTGGGTCCAGTAGTCATACCCGAAGTCTATCGCATCTTCGACTCCGAGCA AAATTACTCGATCAAAACAAGAGTTTCGGCCATTCGCATCTTGAAGCCAC TTTTTGCATCCATTGCTGCACTGATCACCAACAAAGAAGAGCAGAGCACC ATGATGAGCTCCATTTTGACAAACTTTATGGACAAGCTTATGCATTACCT GAGCATGAATAGCGGCGCCGTTTCCAGTTTCCTGCTTCGCACGGAAATTA TCAAGGTGTTTACCCATTTGGTCAATGAGATGCCAAAGTACATCAACCCC TTTATGGACCGTGTTCTGCCCATTGTCTGGCAGCTACTCACACAAATAGC CGAGACTTACGTGAAGGTGTCGGTGAATCAGACTGAGACAAGTCCGCTGG CCAGCGGCGACAGCGAGGAGGATGACGAGCAGACCAATTTCCAATCACTG ATCATCCAGATCCTTGAGTTCATCAACTGCATACTGACATGCAACAAACT ACGTGGCAGCATCAAAAATGTGCTGGCCGACCTCATATACATAACCATTG TTTACATTCAGCTGAGCGAGGAGCAGTTGGAGGACTGGCATGATGATCCG GAGAAGTTCGTGGATGATGAGGATGATGGCGGTGTGGAGCTCACGGTGCG CATGTGCGGCCGTGATGTTCTCCTGGCTATTAACGACGAATTCGGAGCCA ACGCAATTCAGCCATTGCAGGAGGCATTGGGCAGGCACTTTAGTGTGGCT GATGCAGAAAAAGCGGCCAACAATCCCAACTGGTGGAAGATCCAGGAGGC CTGCATGGATGCCGTGCATGCTTTCCGCGACGTCATCCTCGCCGGCGACT CTACGTTTGACCTCCTCAACTACTTGACCATAGTTCGGAATTTGCTTGTG CATCAAGAATCTCCACCTCTTGTTGGTCGTGCCCTTTGGACGTTGAGCAT CTACTCCAAGTCGGACCTATACAATCCGCAGATGTTGACCGAGATTCTTG ATGTCACGCTGTGCAGCCTGTCGCCGGAGAAGTCACACATCCTTAGAATC AGCGCAGTGCGCACCCTGAATGGATTCCTGCAGGCGAACGAAACAATCGA TGGAGAGAAGCGAACTTTGTTGGTCTCAAAGCTGCCGGGTTTCCTAGACG GAATTATGGCTTTAGTGCCGGGATCCAAGGCAGCAGTCTTAGCACTGCTA ATGGAAGCCCTAACTTTCATGGTTAAATTCGATGCTGAGTTTGCCTTTGC TAGCCAGGCAAAGATTACGCCGCTAGCCATCGCTGTATTCCTGAAATACA CTGAAGATCCGTATGTGCTTGAAACAGTCCAGGATCTCATCAAAGCTCTG TGCCAGCGCAAGGAGTGCCTGGGACCGCTACAGGAGAAGTTTATTCCAAC GATTGTTAGCATCCTGGGGCTGACAGGAGCTGCTTCCACGGAAAAGCAGG ATATTGCCCTAGACGTCCTTAACACAATCGTGCGCTACACGGAGCCGCCG CTGAACAATTCCCTGTTAGAGACCGCTTTTCCCGCCATTATAAACTGCGT TCTACACACGGACGACCATGCTGTCATGGTAGCTGGGGGCGAGTGCCTGC GCAGCTTTATCAATGTCTCCCCGGAACAAATATGCAGCTACAAGAACGGC GAGGGCATCAACTGCATCATGCAAGTGGTGGCCACTGTTCTTCTGAATCC GATGAACAGCGAAATGACTGCGGCGGGCCAAATTGGACGTCTTGTTATCA CTATTATCACCAAGATGGGAAGCATGCTCGGCCAGAATGTGGACATGCTG CTGAAGGCTGTGATAAGCAAAATGCAGAACCTCGAGTGCCTAAAAGTGAT AATGAATCTTGTGTTGATCTTCGCCCATTTGTTCCTCACGCAAATGGACG CCGTACTCAACTTTCTGTCCACCGTTCCCGGACCCAACGGGGAGCCAGCG ATGCAGTTTGTACTCACAAACTGGCTCTCCCGCCAGAACTCCTTTTTCGG AAACTATGAGCGAAAGGTCACCACCATGGCTCTGTGCAAGCTGTTCGAGT ATGGTGTTGCCACTCAGGACAACCGTTTGACCACAATAACATTCAAAGAA CTGGTGGACGACCCCACCGACACGCGCAGACGTACTCGATCCGTGGCAGC TACAACCCAGAAGTGGGTAACAATTCCGGCTCTCGTCAAGATCTTCAAGG TTTTGATCTCCGAGTACCAGCACTTCCAGGAGGGCAAGAGCGACGAACCT CTTACGGACAGCGAAGAGGATGGCGATGATGAGGATGCGCCCGGAAATCC GGACAAGCCGCGTTACATATCCGATCTGTTCGAATCTGACGAGGATAACG CCGAGGACGAACAACTGTTGCAAGAGCTGCTGAAGGAAACCAACTACCAG GGCGACATAGCCGACAACCTGCAGAAGTTCCTTACCACCTTCACGCAGAA CGAACACTTTCCCACTTTCTATGAACACCTCACCGAGGGTGAACGCCTCA TCCTGCTCAGCAAGGTCCAGCAGAAGTAGGATAACCTCTCCTTATTCGTA TTGTTCGTATTTATGTATTGTTGCTAACCCTTGAATTGAATATACATTTA TATTTTTTATTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 7240172..7240962 | 1928..2718 | 3955 | 100 | Plus |
chr3R | 27901430 | chr3R | 7238383..7239029 | 310..956 | 3235 | 100 | Plus |
chr3R | 27901430 | chr3R | 7241016..7241612 | 2715..3311 | 2985 | 100 | Plus |
chr3R | 27901430 | chr3R | 7239560..7240112 | 1375..1927 | 2765 | 100 | Plus |
chr3R | 27901430 | chr3R | 7239083..7239503 | 956..1376 | 2105 | 100 | Plus |
chr3R | 27901430 | chr3R | 7237992..7238303 | 1..312 | 1560 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 11414702..11415492 | 1928..2718 | 3955 | 100 | Plus |
3R | 32079331 | 3R | 11412913..11413559 | 310..956 | 3235 | 100 | Plus |
3R | 32079331 | 3R | 11415546..11416144 | 2715..3313 | 2995 | 100 | Plus |
3R | 32079331 | 3R | 11414090..11414642 | 1375..1927 | 2765 | 100 | Plus |
3R | 32079331 | 3R | 11413613..11414033 | 956..1376 | 2105 | 100 | Plus |
3R | 32079331 | 3R | 11412522..11412833 | 1..312 | 1560 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 11155533..11156323 | 1928..2718 | 3955 | 100 | Plus |
3R | 31820162 | 3R | 11153744..11154390 | 310..956 | 3235 | 100 | Plus |
3R | 31820162 | 3R | 11156377..11156975 | 2715..3313 | 2995 | 100 | Plus |
3R | 31820162 | 3R | 11154921..11155473 | 1375..1927 | 2765 | 100 | Plus |
3R | 31820162 | 3R | 11154444..11154864 | 956..1376 | 2105 | 100 | Plus |
3R | 31820162 | 3R | 11153353..11153664 | 1..312 | 1560 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 7237992..7238302 | 1..311 | 100 | -> | Plus |
chr3R | 7238385..7239029 | 312..956 | 100 | -> | Plus |
chr3R | 7239084..7239502 | 957..1375 | 100 | -> | Plus |
chr3R | 7239561..7240112 | 1376..1927 | 100 | -> | Plus |
chr3R | 7240172..7240960 | 1928..2716 | 100 | -> | Plus |
chr3R | 7241018..7241612 | 2717..3311 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ranbp9-RA | 1..3057 | 173..3229 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ranbp9-RA | 1..3057 | 173..3229 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ranbp9-RA | 1..3057 | 173..3229 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ranbp9-RA | 1..3057 | 173..3229 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ranbp9-RA | 1..3057 | 173..3229 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ranbp9-RA | 1..3311 | 1..3311 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ranbp9-RA | 1..3311 | 1..3311 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ranbp9-RA | 1..3311 | 1..3311 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ranbp9-RA | 1..3311 | 1..3311 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ranbp9-RA | 1..3311 | 1..3311 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11412522..11412832 | 1..311 | 100 | -> | Plus |
3R | 11412915..11413559 | 312..956 | 100 | -> | Plus |
3R | 11413614..11414032 | 957..1375 | 100 | -> | Plus |
3R | 11414091..11414642 | 1376..1927 | 100 | -> | Plus |
3R | 11414702..11415490 | 1928..2716 | 100 | -> | Plus |
3R | 11415548..11416142 | 2717..3311 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11412522..11412832 | 1..311 | 100 | -> | Plus |
3R | 11412915..11413559 | 312..956 | 100 | -> | Plus |
3R | 11413614..11414032 | 957..1375 | 100 | -> | Plus |
3R | 11414091..11414642 | 1376..1927 | 100 | -> | Plus |
3R | 11414702..11415490 | 1928..2716 | 100 | -> | Plus |
3R | 11415548..11416142 | 2717..3311 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11412522..11412832 | 1..311 | 100 | -> | Plus |
3R | 11412915..11413559 | 312..956 | 100 | -> | Plus |
3R | 11413614..11414032 | 957..1375 | 100 | -> | Plus |
3R | 11414091..11414642 | 1376..1927 | 100 | -> | Plus |
3R | 11414702..11415490 | 1928..2716 | 100 | -> | Plus |
3R | 11415548..11416142 | 2717..3311 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 7238244..7238554 | 1..311 | 100 | -> | Plus |
arm_3R | 7238637..7239281 | 312..956 | 100 | -> | Plus |
arm_3R | 7239336..7239754 | 957..1375 | 100 | -> | Plus |
arm_3R | 7239813..7240364 | 1376..1927 | 100 | -> | Plus |
arm_3R | 7240424..7241212 | 1928..2716 | 100 | -> | Plus |
arm_3R | 7241270..7241864 | 2717..3311 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11153353..11153663 | 1..311 | 100 | -> | Plus |
3R | 11153746..11154390 | 312..956 | 100 | -> | Plus |
3R | 11154445..11154863 | 957..1375 | 100 | -> | Plus |
3R | 11154922..11155473 | 1376..1927 | 100 | -> | Plus |
3R | 11155533..11156321 | 1928..2716 | 100 | -> | Plus |
3R | 11156379..11156973 | 2717..3311 | 100 | Plus |
Translation from 172 to 3228
> LP08082.pep MSLQFQNDCGDSVKQAIIEELQNLLSSDTGVLQQTEKRIKQLEYTEGYGV YLSEIIMNQAHELPLRQIAIVMLTRYVENHWTDDDDVKRKANGCMASEQA KRTIRNILPNGLYDPNSKIRSSVAHTISTIAATDYPHCWAELFDIIVKCL GGNEDSIHGAMQVLQDFSYDVEQIKELGPVVIPEVYRIFDSEQNYSIKTR VSAIRILKPLFASIAALITNKEEQSTMMSSILTNFMDKLMHYLSMNSGAV SSFLLRTEIIKVFTHLVNEMPKYINPFMDRVLPIVWQLLTQIAETYVKVS VNQTETSPLASGDSEEDDEQTNFQSLIIQILEFINCILTCNKLRGSIKNV LADLIYITIVYIQLSEEQLEDWHDDPEKFVDDEDDGGVELTVRMCGRDVL LAINDEFGANAIQPLQEALGRHFSVADAEKAANNPNWWKIQEACMDAVHA FRDVILAGDSTFDLLNYLTIVRNLLVHQESPPLVGRALWTLSIYSKSDLY NPQMLTEILDVTLCSLSPEKSHILRISAVRTLNGFLQANETIDGEKRTLL VSKLPGFLDGIMALVPGSKAAVLALLMEALTFMVKFDAEFAFASQAKITP LAIAVFLKYTEDPYVLETVQDLIKALCQRKECLGPLQEKFIPTIVSILGL TGAASTEKQDIALDVLNTIVRYTEPPLNNSLLETAFPAIINCVLHTDDHA VMVAGGECLRSFINVSPEQICSYKNGEGINCIMQVVATVLLNPMNSEMTA AGQIGRLVITIITKMGSMLGQNVDMLLKAVISKMQNLECLKVIMNLVLIF AHLFLTQMDAVLNFLSTVPGPNGEPAMQFVLTNWLSRQNSFFGNYERKVT TMALCKLFEYGVATQDNRLTTITFKELVDDPTDTRRRTRSVAATTQKWVT IPALVKIFKVLISEYQHFQEGKSDEPLTDSEEDGDDEDAPGNPDKPRYIS DLFESDEDNAEDEQLLQELLKETNYQGDIADNLQKFLTTFTQNEHFPTFY EHLTEGERLILLSKVQQK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16860-PA | 1019 | GF16860-PA | 1..1019 | 1..1018 | 4955 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18122-PA | 1016 | GG18122-PA | 1..1016 | 1..1018 | 5261 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21659-PA | 1025 | GH21659-PA | 19..1025 | 14..1018 | 4634 | 85.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ranbp9-PD | 1018 | CG5252-PD | 1..1018 | 1..1018 | 5206 | 100 | Plus |
Ranbp9-PA | 1018 | CG5252-PA | 1..1018 | 1..1018 | 5206 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22698-PA | 1023 | GI22698-PA | 15..1023 | 10..1018 | 4654 | 85.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12000-PA | 1022 | GL12000-PA | 1..1021 | 1..1018 | 4615 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18764-PA | 1022 | GA18764-PA | 1..1021 | 1..1018 | 4612 | 85.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23942-PA | 998 | GM23942-PA | 1..998 | 1..1018 | 5146 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18752-PA | 1018 | GD18752-PA | 1..1018 | 1..1018 | 5384 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23426-PA | 1023 | GJ23426-PA | 16..1023 | 11..1018 | 4697 | 86.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11292-PA | 1021 | GK11292-PA | 1..1019 | 1..1018 | 4599 | 84.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26093-PA | 1019 | GE26093-PA | 1..1019 | 1..1018 | 5312 | 97.2 | Plus |
Translation from 172 to 3228
> LP08082.hyp MSLQFQNDCGDSVKQAIIEELQNLLSSDTGVLQQTEKRIKQLEYTEGYGV YLSEIIMNQAHELPLRQIAIVMLTRYVENHWTDDDDVKRKANGCMASEQA KRTIRNILPNGLYDPNSKIRSSVAHTISTIAATDYPHCWAELFDIIVKCL GGNEDSIHGAMQVLQDFSYDVEQIKELGPVVIPEVYRIFDSEQNYSIKTR VSAIRILKPLFASIAALITNKEEQSTMMSSILTNFMDKLMHYLSMNSGAV SSFLLRTEIIKVFTHLVNEMPKYINPFMDRVLPIVWQLLTQIAETYVKVS VNQTETSPLASGDSEEDDEQTNFQSLIIQILEFINCILTCNKLRGSIKNV LADLIYITIVYIQLSEEQLEDWHDDPEKFVDDEDDGGVELTVRMCGRDVL LAINDEFGANAIQPLQEALGRHFSVADAEKAANNPNWWKIQEACMDAVHA FRDVILAGDSTFDLLNYLTIVRNLLVHQESPPLVGRALWTLSIYSKSDLY NPQMLTEILDVTLCSLSPEKSHILRISAVRTLNGFLQANETIDGEKRTLL VSKLPGFLDGIMALVPGSKAAVLALLMEALTFMVKFDAEFAFASQAKITP LAIAVFLKYTEDPYVLETVQDLIKALCQRKECLGPLQEKFIPTIVSILGL TGAASTEKQDIALDVLNTIVRYTEPPLNNSLLETAFPAIINCVLHTDDHA VMVAGGECLRSFINVSPEQICSYKNGEGINCIMQVVATVLLNPMNSEMTA AGQIGRLVITIITKMGSMLGQNVDMLLKAVISKMQNLECLKVIMNLVLIF AHLFLTQMDAVLNFLSTVPGPNGEPAMQFVLTNWLSRQNSFFGNYERKVT TMALCKLFEYGVATQDNRLTTITFKELVDDPTDTRRRTRSVAATTQKWVT IPALVKIFKVLISEYQHFQEGKSDEPLTDSEEDGDDEDAPGNPDKPRYIS DLFESDEDNAEDEQLLQELLKETNYQGDIADNLQKFLTTFTQNEHFPTFY EHLTEGERLILLSKVQQK*