BDGP Sequence Production Resources |
Search the DGRC for LP08087
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 80 |
Well: | 87 |
Vector: | pOT2 |
Associated Gene/Transcript | CG32762-RA |
Protein status: | LP08087.pep: gold |
Sequenced Size: | 882 |
Gene | Date | Evidence |
---|---|---|
CG32762 | 2003-01-01 | Sim4 clustering to Release 3 |
CG32762 | 2008-04-29 | Release 5.5 accounting |
CG32762 | 2008-08-15 | Release 5.9 accounting |
CG32762 | 2008-12-18 | 5.12 accounting |
882 bp (882 high quality bases) assembled on 2005-08-09
GenBank Submission: BT023830
> LP08087.complete CCAACTGCCAGCAATCAAGCAAAATGCACAGCCAACAACTGACTTTGATT TTCGGCATGACCCTCCTGTGGTCAATGGCCAGCGGCACCACCCAACCGCC GAGCCGACGTCCGCCGGTTACCACCGCCCGCACCACGCCCCGCAATTGCC CGCTCTTCCCGCAGGTCTGCTCCCAGACAAGTCCCAGAGTTTGCGGACGA ACTGCGCGTGGCGAGTGCCAACGTTTCGAGAACATCTGCCACCTGATGCT GGCCAATGTGCTACGGCAGCCGGAGGGCGTGCGGCACACCCGCGACATCG ATTGCCGCAACGTGAGGGGAACGGGTGCCGCCAATCGGCGACCCTGCTAT AATCCCTGCCCCGCACGTCCCGTCGTCTGCAAGAGATCACCGCCCAGCCA GCAAATCTGCGTGCGTAGCAGGGACAACCGGCAGTGCAAGGTGTTGGCCA ATAGTTGCCAGCTGCGCAACCAGAATTGCCACAGTCAGCCCAGGAACAAC TGGCTGCGCACCGACAGGCGGCGTTGTGGACAGCTGCAGCTGGGCGATAA GCCGCAGAATTGCATCCGGGTGCCAGTGCGGCCCAGACCCACACGTGCGC AGCACCACTCGACGCAGCACTACTAGGCGCAGCACCACTCGACGCAGCAC CACTAGGCGCAGCAACTCCACAAGCACCACCACCACCGACCGGCCAGCCT AAAGGATCAGGGACATCGGTGGCCAGACATTACAATTTCTTTTTTTTTTC TCTCTCTGCCCAACATCCACTGTGCGCAATAAAAGTCATAAATAAACTGC AAGTTGCGCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32762-RA | 923 | CG32762-RA | 110..923 | 1..814 | 4070 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 5393043..5393487 | 498..54 | 2225 | 100 | Minus |
chrX | 22417052 | chrX | 5392632..5392945 | 811..499 | 1490 | 99 | Minus |
chrX | 22417052 | chrX | 5393557..5393611 | 55..1 | 275 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
I-element | 5371 | I-element DMIFACA 5371bp Derived from M14954 (g157749) (Rel. 44, Last updated, Version 2). | 1138..1285 | 575..718 | 118 | 57.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 5392632..5392945 | 499..811 | 99 | <- | Minus |
chrX | 5393043..5393486 | 55..498 | 100 | <- | Minus |
chrX | 5393558..5393611 | 1..54 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32762-RA | 1..603 | 24..626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32762-RA | 1..603 | 24..626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32762-RA | 1..603 | 24..626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32762-RA | 1..603 | 24..626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32762-RA | 1..603 | 24..626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32762-RA | 1..754 | 1..754 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32762-RA | 1..754 | 1..754 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32762-RA | 1..811 | 1..811 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32762-RA | 1..754 | 1..754 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32762-RA | 12..822 | 1..811 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5500208..5500520 | 499..811 | 100 | <- | Minus |
X | 5500618..5501061 | 55..498 | 100 | <- | Minus |
X | 5501133..5501186 | 1..54 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5500208..5500520 | 499..811 | 100 | <- | Minus |
X | 5500618..5501061 | 55..498 | 100 | <- | Minus |
X | 5501133..5501186 | 1..54 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5500208..5500520 | 499..811 | 100 | <- | Minus |
X | 5500618..5501061 | 55..498 | 100 | <- | Minus |
X | 5501133..5501186 | 1..54 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 5394241..5394553 | 499..811 | 100 | <- | Minus |
arm_X | 5394651..5395094 | 55..498 | 100 | <- | Minus |
arm_X | 5395166..5395219 | 1..54 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5508306..5508618 | 499..811 | 100 | <- | Minus |
X | 5508716..5509159 | 55..498 | 100 | <- | Minus |
X | 5509231..5509284 | 1..54 | 100 | Minus |
Translation from 2 to 625
> LP08087.hyp NCQQSSKMHSQQLTLIFGMTLLWSMASGTTQPPSRRPPVTTARTTPRNCP LFPQVCSQTSPRVCGRTARGECQRFENICHLMLANVLRQPEGVRHTRDID CRNVRGTGAANRRPCYNPCPARPVVCKRSPPSQQICVRSRDNRQCKVLAN SCQLRNQNCHSQPRNNWLRTDRRRCGQLQLGDKPQNCIRVPVRPRPTRAQ HHSTQHY*
Translation from 23 to 625
> LP08087.pep MHSQQLTLIFGMTLLWSMASGTTQPPSRRPPVTTARTTPRNCPLFPQVCS QTSPRVCGRTARGECQRFENICHLMLANVLRQPEGVRHTRDIDCRNVRGT GAANRRPCYNPCPARPVVCKRSPPSQQICVRSRDNRQCKVLANSCQLRNQ NCHSQPRNNWLRTDRRRCGQLQLGDKPQNCIRVPVRPRPTRAQHHSTQHY *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21194-PA | 244 | GF21194-PA | 1..187 | 1..181 | 601 | 63.8 | Plus |
Dana\GF22158-PA | 199 | GF22158-PA | 44..191 | 39..187 | 477 | 62.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18495-PA | 207 | GG18495-PA | 1..186 | 1..185 | 838 | 86.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12865-PA | 197 | GH12865-PA | 20..183 | 30..186 | 372 | 50.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32762-PB | 200 | CG32762-PB | 1..200 | 1..200 | 1116 | 100 | Plus |
CG32762-PA | 200 | CG32762-PA | 1..200 | 1..200 | 1116 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14961-PA | 218 | GI14961-PA | 1..185 | 4..186 | 332 | 45.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16557-PA | 219 | GL16557-PA | 1..178 | 1..174 | 526 | 61 | Plus |
Dper\GL16541-PA | 207 | GL16541-PA | 1..187 | 6..192 | 377 | 42.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17120-PA | 208 | GA17120-PA | 1..187 | 1..183 | 556 | 60.7 | Plus |
Dpse\GA23090-PA | 202 | GA23090-PA | 1..198 | 1..192 | 407 | 44 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12643-PA | 214 | GM12643-PA | 1..192 | 1..192 | 935 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16258-PA | 159 | GD16258-PA | 1..78 | 1..78 | 370 | 89.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18926-PA | 228 | GJ18926-PA | 49..197 | 45..189 | 397 | 53.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20030-PA | 210 | GK20030-PA | 4..164 | 5..175 | 487 | 57.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16811-PA | 220 | GE16811-PA | 1..192 | 1..188 | 744 | 80.2 | Plus |