Clone LP08542 Report

Gene	Date	Evidence
Ca-P60A	2010-06-14	Manual selection by Sue Celniker

Clone Sequence Records

LP08542.complete Sequence

3339 bp assembled on 2011-02-07

GenBank Submission: BT125984.1

> LP08542.complete
CGAGGTTAACGTAGGAGCAGAGCACCCGTATTACGGACCAGATCCCCCAA
TCCCCCGCAGAAACTGAGAATAGAAAAACGAAAACTGCGTCTGTTGTGCG
AAGTGACACGTGTGTGAATCTCATAAGCGGAGCGATTTGGCCAGGGCCAC
TGAACGAAGAGGATAACGAATCAAGATGGAAGACGGTCACTCGAAAACCG
TCGAACAGTCCCTCAACTTCTTCGGAACGGACCCCGAGCGCGGCTTAACC
CTCGACCAGATCAAGGCTAACCAGAAGAAATACGGACCCAATGAGTTGCC
GACTGAGGAAGGAAAGAGCATCTGGCAGCTGGTCTTGGAGCAGTTCGACG
ATCTGCTGGTGAAGATTCTGCTGTTGGCAGCCATCATCTCATTTGTTCTC
GCCCTGTTTGAGGAACACGAGGAAACGTTCACTGCATTTGTAGAGCCCCT
AGTTATTTTACTTATCCTGATAGCCAACGCCGTGGTGGGAGTATGGCAGG
AGCGTAACGCCGAGTCGGCCATTGAGGCCCTCAAGGAGTACGAGCCTGAG
ATGGGCAAGGTGGTGCGCCAGGACAAGTCCGGCATCCAGAAGGTGCGCGC
GAAAGAGATCGTGCCCGGTGACCTGGTTGAGGTGTCTGTCGGTGACAAGA
TCCCTGCCGATATCCGTATCACCCACATCTACTCGACCACCCTTAGGATC
GATCAGTCCATCCTCACCGGTGAGTCGGTCTCCGTCATCAAGCACACCGA
TGCCATCCCCGATCCCCGCGCCGTCAACCAGGACAAGAAGAACATCCTGT
TCTCCGGCACCAACGTCGCAGCCGGCAAGGCCCGTGGCGTCGTCATCGGC
ACTGGCCTGAGCACCGCCATCGGCAAGATCCGTACTGAGATGTCCGAGAC
CGAGGAGATCAAGACCCCCCTGCAGCAGAAACTGGACGAGTTCGGTGAGC
AGCTGTCCAAGGTCATTTCCGTCATTTGCGTTGCCGTGTGGGCCATCAAC
ATCGGCCACTTCAACGACCCCGCTCACGGAGGCTCCTGGATCAAGGGTGC
CATCTACTACTTCAAGATCGCCGTCGCTCTGGCTGTGGCTGCCATCCCCG
AGGGTCTGCCCGCCGTCATCACCACCTGTCTGGCTCTGGGCACCCGCCGC
ATGGCCAAGAAGAATGCCATCGTCCGCTCCCTGCCCTCCGTGGAGACCCT
GGGCTGCACATCTGTCATCTGCTCTGATAAGACCGGCACACTCACCACCA
ACCAAATGTCCGTTTCCCGCATGTTCATCTTCGACAAGGTTGAAGGCAAC
GACAGCAGCTTCCTCGAATTCGAGATGACCGGCTCCACCTACGAGCCCAT
CGGCGAGGTCTTCCTCAACGGTCAGCGCATCAAGGCTGCTGACTACGATA
CCCTGCAGGAACTGTCCACCATCTGCATCATGTGCAACGACTCCGCCATT
GATTACAATGAGTTCAAGCAGGCCTTCGAGAAGGTCGGCGAAGCCACTGA
GACCGCCCTGATTGTGCTGGCTGAGAAACTGAACAGCTTCAGCGTGAACA
AGTCTGGCCTGGACCGCCGCTCGGCTGCCATCGCCTGCCGCGGTGAGATC
GAAACCAAGTGGAAGAAGGAATTCACCCTGGAGTTCTCTCGCGATCGTAA
ATCCATGTCCTCGTACTGCACCCCCCTGAAGGCTTCCCGCCTGGGCACTG
GCCCCAAGTTGTTCGTGAAGGGCGCCCCCGAGGGTGTTCTAGAGCGTTGC
ACACACGCCCGCGTTGGCACCACCAAGGTTCCTCTGACCTCGGCCCTGAA
GGCCAAGATCCTCGCCCTGACCGGCCAGTACGGTACTGGACGCGACACCC
TTCGCTGCCTGGCTCTGGCCGTTGCCGATAGCCCCATGAAGCCCGACGAG
ATGGATCTGGGCGACTCCACCAAGTTCTACCAGTATGAGGTTAACCTGAC
CTTCGTCGGTGTTGTGGGCATGTTGGATCCCCCCCGTAAGGAAGTTTTCG
ATTCCATTGTCCGCTGCCGTGCCGCCGGTATTCGTGTTATTGTGATCACC
GGCGACAACAAGGCCACTGCCGAGGCTATCTGCCGCAGAATCGGTGTATT
CGCCGAGGATGAGGACACCACTGGCAAGTCCTACTCGGGTCGTGAATTCG
ACGACCTTTCCCCCACCGAACAAAAGGCTGCCGTCGCCCGCTCCCGCCTC
TTCTCCCGCGTGGAGCCCCAGCACAAGTCCAAGATTGTTGAGTTCCTGCA
GAGCATGAACGAAATCTCCGCTATGACTGGTGATGGTGTGAACGACGCCC
CCGCCCTGAAGAAGGCTGAGATCGGTATTGCCATGGGCTCTGGTACCGCC
GTCGCCAAGTCTGCCGCCGAAATGGTGCTGGCTGACGACAACTTCTCCTC
CATCGTGTCTGCCGTTGAAGAAGGTCGCGCTATCTACAACAACATGAAAC
AGTTCATCCGCTACCTCATCTCTTCGAACATTGGTGAGGTCGTCTCCATC
TTCCTTACTGCTGCCCTTGGCCTGCCCGAGGCTCTGATTCCCGTCCAGCT
GCTCTGGGTTAACTTGGTTACTGATGGTCTCCCAGCCACCGCTCTGGGCT
TCAACCCCCCTGATCTGGATATCATGGAGAAGCCCCCCAGGAAGGCCGAT
GAGGGTCTCATTTCCGGATGGTTGTTCTTCCGTTACATGGCTATTGGATT
CTATGTCGGCGCTGCCACCGTCGGTGCCGCCGCCTGGTGGTTCGTGTTCT
CTGATGAGGGACCCAAACTGTCCTACTGGCAGCTGACCCACCATCTGTCC
TGCTTGGGCGGTGGCGACGAGTTCAAGGGCGTTGACTGCAAGATCTTCAG
CGACCCCCATGCGATGACCATGGCTCTGTCCGTGCTGGTGACAATCGAAA
TGTTGAACGCAATGAACAGCTTGTCCGAGAACCAGTCGCTGATTACCATG
CCCCCATGGTGCAACCTGTGGCTGATTGGATCAATGGCACTCTCCTTCAC
TCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCACCGTCTTCCAAG
TGACACCGTTGTCTGCAGAAGAATGGATAACTGTGATGAAATTCTCAATT
CCTGTAGTTTTATTAGATGAGACATTGAAGTTTGTTGCTAGAAAAATCGC
AGATGGTGAGAGTCCTATATATAAGATGCATGGGATTGTGTTAATGTGGG
CTGTCTTCTTTGGCCTGCTGTACGCTATGATGCTTTAAGAATATAATTAT
AATCCATAAGCCCAACTTCATTATTCTAATTTCTAGTATAAAATGTTACT
AAATATAAACAGAAGCAAGAAAAAAAAAAAAAAAAAAAA

LP08542.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 01:37:24

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chr2R	21145070	chr2R	19816205..19818378	2568..395	10750	99.6	Minus
chr2R	21145070	chr2R	19815199..19815480	3319..3038	1380	99.3	Minus
chr2R	21145070	chr2R	19815731..19815968	2919..2682	1190	100	Minus
chr2R	21145070	chr2R	19818716..19818864	293..145	745	100	Minus
chr2R	21145070	chr2R	19819304..19819449	146..1	715	99.3	Minus
chr2R	21145070	chr2R	19815549..19815671	3037..2915	615	100	Minus
chr2R	21145070	chr2R	19816032..19816148	2682..2566	585	100	Minus
chr2R	21145070	chr2R	19818453..19818539	396..310	435	100	Minus
chr3R	27901430	chr3R	16789850..16789913	2274..2337	200	87.5	Plus
chr3R	27901430	chr3R	16788797..16788883	1188..1274	195	81.6	Plus

Blast to na_all.dmel.RELEASE6 performed 2019-03-17 01:37:22

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
2R	25286936	2R	23930156..23932329	2568..395	10870	100	Minus
2R	25286936	2R	23929148..23929431	3321..3038	1405	99.6	Minus
2R	25286936	2R	23929682..23929919	2919..2682	1190	100	Minus
2R	25286936	2R	23932667..23932815	293..145	745	100	Minus
2R	25286936	2R	23933258..23933403	146..1	730	100	Minus
2R	25286936	2R	23929500..23929622	3037..2915	615	100	Minus
2R	25286936	2R	23929983..23930099	2682..2566	585	100	Minus
2R	25286936	2R	23932404..23932490	396..310	435	100	Minus
3R	32079331	3R	20964895..20964981	1188..1274	195	81.6	Plus

Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:06:24

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
2R	25260384	2R	23931355..23933528	2568..395	10870	100	Minus
2R	25260384	2R	23930347..23930630	3321..3038	1405	99.6	Minus
2R	25260384	2R	23930881..23931118	2919..2682	1190	100	Minus
2R	25260384	2R	23933866..23934014	293..145	745	100	Minus
2R	25260384	2R	23934457..23934602	146..1	730	100	Minus
2R	25260384	2R	23930699..23930821	3037..2915	615	100	Minus
2R	25260384	2R	23931182..23931298	2682..2566	585	100	Minus
2R	25260384	2R	23933603..23933689	396..310	435	100	Minus
3R	31820162	3R	20705726..20705812	1188..1274	195	81.6	Plus
3R	31820162	3R	20706779..20706842	2274..2337	185	85.9	Plus

Blast to na_te.dros performed on 2019-03-17 01:37:23 has no hits.

LP08542.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 01:38:28 Download gff for LP08542.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chr2R	19819305..19819449	1..145	99		Minus
chr2R	19815199..19815480	3038..3319	99	<-	Minus
chr2R	19815549..19815666	2920..3037	100	<-	Minus
chr2R	19815731..19815967	2683..2919	100	<-	Minus
chr2R	19816032..19816147	2567..2682	100	<-	Minus
chr2R	19816207..19818378	395..2566	99	<-	Minus
chr2R	19818455..19818537	312..394	100	<-	Minus
chr2R	19818623..19818640	294..311	100	<-	Minus
chr2R	19818716..19818863	146..293	100	<-	Minus

Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-02-07 15:07:02 Download gff for LP08542.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Ca-P60A-RD	1..3063	176..3238	100		Plus

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:45:29 Download gff for LP08542.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Ca-P60A-RC	1..3063	176..3238	100		Plus

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 18:04:12 Download gff for LP08542.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Ca-P60A-RC	1..3063	176..3238	100		Plus

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-07 15:07:02 Download gff for LP08542.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Ca-P60A-RC	145..3463	1..3319	99		Plus

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:45:29 Download gff for LP08542.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Ca-P60A-RC	42..3360	1..3319	99		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 18:04:12 Download gff for LP08542.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Ca-P60A-RC	42..3360	1..3319	99		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:38:28 Download gff for LP08542.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2R	23929150..23929431	3038..3319	99	<-	Minus
2R	23929500..23929617	2920..3037	100	<-	Minus
2R	23929682..23929918	2683..2919	100	<-	Minus
2R	23929983..23930098	2567..2682	100	<-	Minus
2R	23930158..23932329	395..2566	100	<-	Minus
2R	23932406..23932488	312..394	100	<-	Minus
2R	23932574..23932591	294..311	100	<-	Minus
2R	23932667..23932814	146..293	100	<-	Minus
2R	23933259..23933403	1..145	100		Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:38:28 Download gff for LP08542.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2R	23929150..23929431	3038..3319	99	<-	Minus
2R	23929500..23929617	2920..3037	100	<-	Minus
2R	23929682..23929918	2683..2919	100	<-	Minus
2R	23929983..23930098	2567..2682	100	<-	Minus
2R	23930158..23932329	395..2566	100	<-	Minus
2R	23932406..23932488	312..394	100	<-	Minus
2R	23932574..23932591	294..311	100	<-	Minus
2R	23932667..23932814	146..293	100	<-	Minus
2R	23933259..23933403	1..145	100		Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:38:28 Download gff for LP08542.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2R	23929150..23929431	3038..3319	99	<-	Minus
2R	23929500..23929617	2920..3037	100	<-	Minus
2R	23929682..23929918	2683..2919	100	<-	Minus
2R	23929983..23930098	2567..2682	100	<-	Minus
2R	23930158..23932329	395..2566	100	<-	Minus
2R	23932406..23932488	312..394	100	<-	Minus
2R	23932574..23932591	294..311	100	<-	Minus
2R	23932667..23932814	146..293	100	<-	Minus
2R	23933259..23933403	1..145	100		Minus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:45:29 Download gff for LP08542.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_2R	19816673..19816954	3038..3319	99	<-	Minus
arm_2R	19817023..19817140	2920..3037	100	<-	Minus
arm_2R	19817205..19817441	2683..2919	100	<-	Minus
arm_2R	19817506..19817621	2567..2682	100	<-	Minus
arm_2R	19817681..19819852	395..2566	100	<-	Minus
arm_2R	19819929..19820011	312..394	100	<-	Minus
arm_2R	19820097..19820114	294..311	100	<-	Minus
arm_2R	19820190..19820337	146..293	100	<-	Minus
arm_2R	19820782..19820926	1..145	100		Minus

Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:57:12 Download gff for LP08542.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2R	23931200..23931315	2567..2682	100	<-	Minus
2R	23930367..23930648	3038..3319	99	<-	Minus
2R	23930717..23930834	2920..3037	100	<-	Minus
2R	23930899..23931135	2683..2919	100	<-	Minus
2R	23931375..23933546	395..2566	100	<-	Minus
2R	23933623..23933705	312..394	100	<-	Minus
2R	23933791..23933808	294..311	100	<-	Minus
2R	23933884..23934031	146..293	100	<-	Minus
2R	23934476..23934620	1..145	100		Minus

LP08542.pep Sequence

Translation from 175 to 3237

> LP08542.pep
MEDGHSKTVEQSLNFFGTDPERGLTLDQIKANQKKYGPNELPTEEGKSIW
QLVLEQFDDLLVKILLLAAIISFVLALFEEHEETFTAFVEPLVILLILIA
NAVVGVWQERNAESAIEALKEYEPEMGKVVRQDKSGIQKVRAKEIVPGDL
VEVSVGDKIPADIRITHIYSTTLRIDQSILTGESVSVIKHTDAIPDPRAV
NQDKKNILFSGTNVAAGKARGVVIGTGLSTAIGKIRTEMSETEEIKTPLQ
QKLDEFGEQLSKVISVICVAVWAINIGHFNDPAHGGSWIKGAIYYFKIAV
ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICS
DKTGTLTTNQMSVSRMFIFDKVEGNDSSFLEFEMTGSTYEPIGEVFLNGQ
RIKAADYDTLQELSTICIMCNDSAIDYNEFKQAFEKVGEATETALIVLAE
KLNSFSVNKSGLDRRSAAIACRGEIETKWKKEFTLEFSRDRKSMSSYCTP
LKASRLGTGPKLFVKGAPEGVLERCTHARVGTTKVPLTSALKAKILALTG
QYGTGRDTLRCLALAVADSPMKPDEMDLGDSTKFYQYEVNLTFVGVVGML
DPPRKEVFDSIVRCRAAGIRVIVITGDNKATAEAICRRIGVFAEDEDTTG
KSYSGREFDDLSPTEQKAAVARSRLFSRVEPQHKSKIVEFLQSMNEISAM
TGDGVNDAPALKKAEIGIAMGSGTAVAKSAAEMVLADDNFSSIVSAVEEG
RAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTD
GLPATALGFNPPDLDIMEKPPRKADEGLISGWLFFRYMAIGFYVGAATVG
AAAWWFVFSDEGPKLSYWQLTHHLSCLGGGDEFKGVDCKIFSDPHAMTMA
LSVLVTIEMLNAMNSLSENQSLITMPPWCNLWLIGSMALSFTLHFVILYV
DVLSTVFQVTPLSAEEWITVMKFSIPVVLLDETLKFVARKIADGESPIYK
MHGIVLMWAVFFGLLYAMML*

LP08542.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:38:37

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dana\GF12053-PA	1002	GF12053-PA	1..993	1..993	5207	98.2	Plus
Dana\GF10997-PA	1035	GF10997-PA	157..1021	19..991	1109	31.8	Plus
Dana\GF17998-PA	1041	GF17998-PA	60..1033	3..994	993	30.2	Plus
Dana\GF21692-PA	1141	GF21692-PA	44..1000	36..975	699	27.1	Plus
Dana\GF13018-PA	1041	GF13018-PA	63..868	18..835	477	23.9	Plus

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:38:37

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG19978-PA	1002	GG19978-PA	1..993	1..993	5267	99.6	Plus
Dere\GG16277-PA	1126	GG16277-PA	248..1112	19..991	1103	31.7	Plus
Dere\GG24266-PA	1041	GG24266-PA	60..1033	3..994	988	30	Plus
Dere\GG16375-PA	925	GG16375-PA	18..917	71..994	945	29.1	Plus
Dere\GG16451-PA	1118	GG16451-PA	48..888	18..843	643	27.9	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:38:38

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH20185-PA	1020	GH20185-PA	1..1020	1..1020	5120	95.7	Plus
Dgri\GH16765-PA	1042	GH16765-PA	164..1028	19..991	1103	31.5	Plus
Dgri\GH21713-PA	1042	GH21713-PA	61..888	3..858	981	32.1	Plus
Dgri\GH20530-PA	854	GH20530-PA	2..741	124..869	466	22.9	Plus
Dgri\GH23619-PA	1035	GH23619-PA	482..868	436..843	400	30.9	Plus
Dgri\GH23619-PA	1035	GH23619-PA	336..469	246..372	207	36.6	Plus
Dgri\GH23619-PA	1035	GH23619-PA	48..265	18..237	162	26.4	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:47:25

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
SERCA-PF	1020	CG3725-PF	1..1020	1..1020	5190	100	Plus
SERCA-PH	1020	CG3725-PH	1..1020	1..1020	5190	100	Plus
SERCA-PC	1020	CG3725-PC	1..1020	1..1020	5190	100	Plus
SERCA-PD	1020	CG3725-PD	1..1020	1..1020	5190	100	Plus
SERCA-PG	1020	CG3725-PG	1..1020	1..1020	5190	100	Plus
SERCA-PB	1020	CG3725-PB	1..1020	1..1020	5190	100	Plus
SERCA-PE	1020	CG3725-PE	1..1020	1..1020	5190	100	Plus
SERCA-PI	999	CG3725-PI	1..993	1..993	5046	100	Plus
SERCA-PA	1002	CG3725-PA	1..993	1..993	5046	100	Plus
SPoCk-PA	901	CG32451-PA	23..885	19..989	1117	31.5	Plus
SPoCk-PF	917	CG32451-PF	39..901	19..989	1117	31.5	Plus
SPoCk-PE	917	CG32451-PE	39..901	19..989	1117	31.5	Plus
SPoCk-PC	924	CG32451-PC	46..908	19..989	1117	31.5	Plus
SPoCk-PD	997	CG32451-PD	119..981	19..989	1117	31.5	Plus
SPoCk-PB	1034	CG32451-PB	156..1018	19..989	1117	31.5	Plus
JYalpha-PB	1009	CG45760-PB	31..1001	3..994	978	29.4	Plus
SPoCk-PG	1062	CG32451-PG	126..1046	19..989	977	29	Plus
Atpalpha-PK	1002	CG5670-PK	21..994	3..994	970	29.8	Plus
Atpalpha-PJ	1002	CG5670-PJ	21..994	3..994	970	29.8	Plus
Atpalpha-PI	1002	CG5670-PI	21..994	3..994	970	29.8	Plus
Atpalpha-PE	1002	CG5670-PE	21..994	3..994	970	29.8	Plus
Atpalpha-PC	1002	CG5670-PC	21..994	3..994	970	29.8	Plus
Atpalpha-PB	1002	CG5670-PB	21..994	3..994	970	29.8	Plus
Atpalpha-PA	1041	CG5670-PA	60..1033	3..994	970	29.8	Plus
Atpalpha-PH	1002	CG5670-PH	21..994	3..994	960	29.8	Plus
Atpalpha-PF	1002	CG5670-PF	21..994	3..994	960	29.8	Plus
Atpalpha-PG	1002	CG5670-PG	21..994	3..994	958	29.7	Plus
Atpalpha-PD	839	CG5670-PD	21..794	3..800	903	31.9	Plus
PMCA-PP	1194	CG42314-PP	48..1042	18..987	714	26.6	Plus
PMCA-PN	1120	CG42314-PN	48..1054	18..987	636	25.4	Plus
PMCA-PK	1183	CG42314-PK	48..1054	18..987	636	25.4	Plus
PMCA-PQ	1187	CG42314-PQ	48..1054	18..987	636	25.4	Plus
PMCA-PL	1206	CG42314-PL	48..1054	18..987	636	25.4	Plus
PMCA-PI	1206	CG42314-PI	48..1054	18..987	636	25.4	Plus
PMCA-PO	1206	CG42314-PO	48..1054	18..987	636	25.4	Plus
PMCA-PR	1210	CG42314-PR	48..1054	18..987	636	25.4	Plus
PMCA-PM	1255	CG42314-PM	48..1054	18..987	636	25.4	Plus
PMCA-PJ	1255	CG42314-PJ	48..1054	18..987	636	25.4	Plus
PMCA-PS	1255	CG42314-PS	48..1054	18..987	636	25.4	Plus
CG45062-PB	794	CG45062-PB	13..645	206..862	377	21.9	Plus
CG45062-PA	794	CG45062-PA	13..645	206..862	377	21.9	Plus
anne-PI	1290	CG32000-PI	159..484	21..363	181	26.1	Plus
anne-PB	1314	CG32000-PB	183..508	21..363	181	26.1	Plus
anne-PA	1314	CG32000-PA	183..508	21..363	181	26.1	Plus
anne-PG	1388	CG32000-PG	257..582	21..363	181	26.1	Plus
anne-PH	1451	CG32000-PH	320..645	21..363	181	26.1	Plus
ATP7-PC	1254	CG1886-PC	465..764	67..369	169	24.7	Plus
ATP7-PB	1254	CG1886-PB	465..764	67..369	169	24.7	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:38:39

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI20714-PA	1002	GI20714-PA	1..993	1..993	5150	96.7	Plus
Dmoj\GI13426-PA	1033	GI13426-PA	155..1019	19..991	1119	31.9	Plus
Dmoj\GI10755-PA	1039	GI10755-PA	58..885	3..858	989	31.7	Plus
Dmoj\GI21352-PA	698	GI21352-PA	31..670	3..690	632	28.4	Plus
Dmoj\GI18976-PA	963	GI18976-PA	22..796	61..851	540	22.9	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:38:40

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\GL10916-PA	1002	GL10916-PA	1..993	1..993	4960	95.8	Plus
Dper\GL24291-PA	895	GL24291-PA	52..847	3..822	983	32.5	Plus
Dper\GL16518-PA	2190	GL16518-PA	1212..2182	3..994	917	27.8	Plus
Dper\GL24999-PA	657	GL24999-PA	24..643	288..991	851	32	Plus
Dper\GL18149-PA	1290	GL18149-PA	46..1013	33..975	677	26.6	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:38:41

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\GA17643-PA	1002	GA17643-PA	1..993	1..993	4960	95.8	Plus
Dpse\GA16915-PA	1044	GA16915-PA	166..1030	19..991	1109	31.8	Plus
Dpse\GA19046-PE	1002	GA19046-PE	21..994	3..994	997	30.3	Plus
Dpse\GA19046-PB	1041	GA19046-PB	60..1033	3..994	997	30.3	Plus
Dpse\GA19046-PD	1002	GA19046-PD	21..994	3..994	988	30.2	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:38:42

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\GM15491-PA	1002	GM15491-PA	1..993	1..993	5277	99.9	Plus
Dsec\GM22470-PA	1037	GM22470-PA	159..1023	19..991	1105	31.6	Plus
Dsec\GM15055-PA	1041	GM15055-PA	60..1033	3..994	984	30	Plus
Dsec\GM10716-PA	925	GM10716-PA	18..917	71..994	951	29.7	Plus
Dsec\GM26783-PA	1141	GM26783-PA	48..888	18..843	645	27.4	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:38:42

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\GD24994-PA	688	GD24994-PA	1..608	1..608	3186	99.5	Plus
Dsim\GD15051-PA	1012	GD15051-PA	167..996	19..956	1078	32	Plus
Dsim\GD19691-PA	1009	GD19691-PA	31..1001	3..994	1003	29.4	Plus
Dsim\GD19388-PA	1092	GD19388-PA	60..1033	3..994	983	30	Plus
Dsim\GD24384-PA	1023	GD24384-PA	273..826	246..843	579	30.2	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:38:43

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\GJ21881-PA	987	GJ21881-PA	1..978	1..993	5042	95.2	Plus
Dvir\GJ11786-PA	1037	GJ11786-PA	159..1023	19..991	1121	32	Plus
Dvir\GJ10697-PA	1041	GJ10697-PA	60..887	3..858	986	31.8	Plus
Dvir\GJ18574-PA	894	GJ18574-PA	34..856	3..858	955	29.9	Plus
Dvir\GJ18346-PA	1154	GJ18346-PA	48..886	18..843	645	26.8	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:38:44

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK15853-PA	1002	GK15853-PA	1..993	1..993	5174	97.4	Plus
Dwil\GK20534-PA	1059	GK20534-PA	181..1045	19..991	1127	32.1	Plus
Dwil\GK11950-PA	1036	GK11950-PA	55..1028	3..994	987	30	Plus
Dwil\GK13713-PA	1251	GK13713-PA	338..1033	246..975	606	28.3	Plus
Dwil\GK23675-PA	548	GK23675-PA	1..498	116..663	547	29.4	Plus
Dwil\GK13713-PA	1251	GK13713-PA	48..265	18..237	166	27.8	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:38:45

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\GE11511-PA	1002	GE11511-PA	1..993	1..993	5267	99.6	Plus
Dyak\GE22637-PA	1032	GE22637-PA	154..1018	19..991	1104	31.6	Plus
Dyak\GE25699-PA	1033	GE25699-PA	52..1025	3..994	987	30.1	Plus
Dyak\GE14534-PA	959	GE14534-PA	1..951	23..994	950	28.9	Plus
Dyak\GE14517-PA	1141	GE14517-PA	48..888	18..843	641	27.4	Plus

LP08542.hyp Sequence

Translation from 175 to 3237

> LP08542.hyp
MEDGHSKTVEQSLNFFGTDPERGLTLDQIKANQKKYGPNELPTEEGKSIW
QLVLEQFDDLLVKILLLAAIISFVLALFEEHEETFTAFVEPLVILLILIA
NAVVGVWQERNAESAIEALKEYEPEMGKVVRQDKSGIQKVRAKEIVPGDL
VEVSVGDKIPADIRITHIYSTTLRIDQSILTGESVSVIKHTDAIPDPRAV
NQDKKNILFSGTNVAAGKARGVVIGTGLSTAIGKIRTEMSETEEIKTPLQ
QKLDEFGEQLSKVISVICVAVWAINIGHFNDPAHGGSWIKGAIYYFKIAV
ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICS
DKTGTLTTNQMSVSRMFIFDKVEGNDSSFLEFEMTGSTYEPIGEVFLNGQ
RIKAADYDTLQELSTICIMCNDSAIDYNEFKQAFEKVGEATETALIVLAE
KLNSFSVNKSGLDRRSAAIACRGEIETKWKKEFTLEFSRDRKSMSSYCTP
LKASRLGTGPKLFVKGAPEGVLERCTHARVGTTKVPLTSALKAKILALTG
QYGTGRDTLRCLALAVADSPMKPDEMDLGDSTKFYQYEVNLTFVGVVGML
DPPRKEVFDSIVRCRAAGIRVIVITGDNKATAEAICRRIGVFAEDEDTTG
KSYSGREFDDLSPTEQKAAVARSRLFSRVEPQHKSKIVEFLQSMNEISAM
TGDGVNDAPALKKAEIGIAMGSGTAVAKSAAEMVLADDNFSSIVSAVEEG
RAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTD
GLPATALGFNPPDLDIMEKPPRKADEGLISGWLFFRYMAIGFYVGAATVG
AAAWWFVFSDEGPKLSYWQLTHHLSCLGGGDEFKGVDCKIFSDPHAMTMA
LSVLVTIEMLNAMNSLSENQSLITMPPWCNLWLIGSMALSFTLHFVILYV
DVLSTVFQVTPLSAEEWITVMKFSIPVVLLDETLKFVARKIADGESPIYK
MHGIVLMWAVFFGLLYAMML*

LP08542.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:27:09

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Ca-P60A-PF	1020	CG3725-PF	1..1020	1..1020	5190	100	Plus
Ca-P60A-PH	1020	CG3725-PH	1..1020	1..1020	5190	100	Plus
Ca-P60A-PC	1020	CG3725-PC	1..1020	1..1020	5190	100	Plus
Ca-P60A-PD	1020	CG3725-PD	1..1020	1..1020	5190	100	Plus
Ca-P60A-PG	1020	CG3725-PG	1..1020	1..1020	5190	100	Plus

Library:	LP
Tissue Source:	Drosophila melanogaster larval-early pupal
Created by:	Ling Hong
Date Registered:	1998-06-11
Comments:	Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:	85
Well:	42
Vector:	pOT2
Associated Gene/Transcript	Ca-P60A-RC
Protein status:	LP08542.pep: gold
Sequenced Size:	3339

Clone LP08542 Report

Clone and Library Details

Associated Genes

Clone Sequence Records

LP08542.complete Sequence

LP08542.complete Blast Records

LP08542.complete Sim4 Records

LP08542.pep Sequence

LP08542.pep Blast Records

LP08542.hyp Sequence

LP08542.hyp Blast Records