Clone LP08761 Report

Search the DGRC for LP08761

Clone and Library Details

Library:LP
Tissue Source:Drosophila melanogaster larval-early pupal
Created by:Ling Hong
Date Registered:1998-06-11
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:87
Well:61
Vector:pOT2
Associated Gene/TranscriptCG31266-RA
Protein status:LP08761.pep: validated full length
Sequenced Size:974

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG31266 2002-11-15 Blastp of sequenced clone
CG31266 2003-01-01 Sim4 clustering to Release 3
CG31266 2008-04-29 Release 5.5 accounting
CG31266 2008-08-15 Release 5.9 accounting
CG31266 2008-12-18 5.12 accounting

Clone Sequence Records

LP08761.complete Sequence

974 bp (974 high quality bases) assembled on 2002-11-15

GenBank Submission: BT003558

> LP08761.complete
AGGTGGAATCTTACGGTGCTGCTGGGTCTGACTCTGCTGGCTCTTCAGGG
GCCAACGGAAGCCATGAGGATGCGAGGAGAACCACTTCCGGGTTTGGCCA
ATATCGAGAGGCATCGCTCCACCGAAGCTGTGCCCCAAGGTCGTGTGATC
GGTGGCACCACCGCCGCCGAGGGCAACTGGCCCTGGATAGCAAGTATCCA
AAATGCATACTCGTATCACTTGTGCGGAGCCATCATACTCGACGAAACTT
GGGTGCTCACAGCGGCCAGTTGCGTGGCGGGATTGAGGCCATTAAATCTG
CTGGTTGTGACTGGAACTGTGGACTGGTGGGATCTGTATGCTCCGTACTA
CACTGTGAGCCAGATCCATGTGCACTGCAACTTCGACAAGCCGCTGTATC
ACAATGACATAGCCCTGCTGCAGTTGTCGTCCAAAATCGAGTTCAACGAT
GTGACAAAGAATATAACCTTGGCGGATATCGATGAATTGGAAGAGGGGGA
TAAGTTGACCTTTGCCGGTTGGGGCAGCTCCGAGGCCATGGGCACCTATG
GTCGCTATCTGCAGGAGGCATCCGGCACATATCTGCCGGTGGACGCATGC
CGGGAGAAGTTGCAGAACCAAGATGATGTGGACCTGGGTCATGTGTGTGT
CCAAATGGACGCGGGCCAGGGCGCCTGCCATGGCGACACTGGCGGACCGC
TTATCGATGAGCAGCAGCGCTTGGTAGGCATCGGTAATTGGGGTGTGCCA
TGCGGACGTGGCTATCCGGATGTGTATGCGCGTACTGCCTTCTACCACGA
TTGGATCCGCACCACCATGAATGGATGTACGATCGCCTAGTCATGGGTAC
CTCGTATCTGTGCACTGAGAGAAATGCGGCTCATCATGCGGCCAGAGATT
TTAAATATGACAAATATATTTTAAAAGCACTATTAAATATGATTTAATCA
TTAAAGAAAAAAAAAAAAAAAAAA

LP08761.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:32:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG31266-RA 1096 CG31266-RA 115..1072 1..958 4790 100 Plus
CG31266-RB 2422 CG31266-RB 1441..2398 1..958 4790 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 20:48:49
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 12957118..12957886 1..769 3845 100 Plus
chr3R 27901430 chr3R 12957950..12958138 768..956 945 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:53:01 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 20:48:47
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17132694..17133462 1..769 3845 100 Plus
3R 32079331 3R 17133526..17133716 768..958 955 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:08:17
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 16873525..16874293 1..769 3845 100 Plus
3R 31820162 3R 16874357..16874547 768..958 955 100 Plus
Blast to na_te.dros performed on 2019-03-16 20:48:47 has no hits.

LP08761.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 20:49:36 Download gff for LP08761.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 12957118..12957885 1..768 100 -> Plus
chr3R 12957951..12958138 769..956 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:39:22 Download gff for LP08761.complete
Subject Subject Range Query Range Percent Splice Strand
CG31266-RB 10..849 1..840 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:04:02 Download gff for LP08761.complete
Subject Subject Range Query Range Percent Splice Strand
CG31266-RB 10..849 1..840 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:28:49 Download gff for LP08761.complete
Subject Subject Range Query Range Percent Splice Strand
CG31266-RB 10..849 1..840 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:54:17 Download gff for LP08761.complete
Subject Subject Range Query Range Percent Splice Strand
CG31266-RA 1..777 64..840 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:55:18 Download gff for LP08761.complete
Subject Subject Range Query Range Percent Splice Strand
CG31266-RB 10..849 1..840 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:22:53 Download gff for LP08761.complete
Subject Subject Range Query Range Percent Splice Strand
CG31266-RB 1441..2396 1..956 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:04:02 Download gff for LP08761.complete
Subject Subject Range Query Range Percent Splice Strand
CG31266-RB 10..965 1..956 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:28:49 Download gff for LP08761.complete
Subject Subject Range Query Range Percent Splice Strand
CG31266-RB 33..988 1..956 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:54:17 Download gff for LP08761.complete
Subject Subject Range Query Range Percent Splice Strand
CG31266-RA 1..956 1..956 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:55:18 Download gff for LP08761.complete
Subject Subject Range Query Range Percent Splice Strand
CG31266-RB 33..988 1..956 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:49:36 Download gff for LP08761.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17132694..17133461 1..768 100 -> Plus
3R 17133527..17133714 769..956 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:49:36 Download gff for LP08761.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17132694..17133461 1..768 100 -> Plus
3R 17133527..17133714 769..956 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:49:36 Download gff for LP08761.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17132694..17133461 1..768 100 -> Plus
3R 17133527..17133714 769..956 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:28:49 Download gff for LP08761.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12958416..12959183 1..768 100 -> Plus
arm_3R 12959249..12959436 769..956 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:26:32 Download gff for LP08761.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16873525..16874292 1..768 100 -> Plus
3R 16874358..16874545 769..956 100   Plus

LP08761.hyp Sequence

Translation from 0 to 839

> LP08761.hyp
RWNLTVLLGLTLLALQGPTEAMRMRGEPLPGLANIERHRSTEAVPQGRVI
GGTTAAEGNWPWIASIQNAYSYHLCGAIILDETWVLTAASCVAGLRPLNL
LVVTGTVDWWDLYAPYYTVSQIHVHCNFDKPLYHNDIALLQLSSKIEFND
VTKNITLADIDELEEGDKLTFAGWGSSEAMGTYGRYLQEASGTYLPVDAC
REKLQNQDDVDLGHVCVQMDAGQGACHGDTGGPLIDEQQRLVGIGNWGVP
CGRGYPDVYARTAFYHDWIRTTMNGCTIA*

LP08761.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:32:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG31266-PB 282 CG31266-PB 4..282 1..279 1519 100 Plus
CG31267-PA 275 CG31267-PA 11..275 8..279 640 44.1 Plus
CG5246-PA 272 CG5246-PA 31..265 38..273 527 43.7 Plus
CG31265-PA 266 CG31265-PA 3..260 7..275 493 39.8 Plus
CG31269-PB 273 CG31269-PB 6..261 4..275 484 40.4 Plus

LP08761.pep Sequence

Translation from 63 to 839

> LP08761.pep
MRMRGEPLPGLANIERHRSTEAVPQGRVIGGTTAAEGNWPWIASIQNAYS
YHLCGAIILDETWVLTAASCVAGLRPLNLLVVTGTVDWWDLYAPYYTVSQ
IHVHCNFDKPLYHNDIALLQLSSKIEFNDVTKNITLADIDELEEGDKLTF
AGWGSSEAMGTYGRYLQEASGTYLPVDACREKLQNQDDVDLGHVCVQMDA
GQGACHGDTGGPLIDEQQRLVGIGNWGVPCGRGYPDVYARTAFYHDWIRT
TMNGCTIA*

LP08761.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:50:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17130-PA 240 GF17130-PA 6..240 24..258 1011 77.4 Plus
Dana\GF17131-PA 275 GF17131-PA 18..274 11..257 612 45.5 Plus
Dana\GF17133-PA 278 GF17133-PA 29..254 27..253 498 45.2 Plus
Dana\GF17132-PA 272 GF17132-PA 19..266 4..253 484 41.7 Plus
Dana\GF17863-PA 269 GF17863-PA 29..255 28..254 482 43.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:50:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22039-PA 258 GG22039-PA 1..258 1..258 1287 92.2 Plus
Dere\GG22050-PA 275 GG22050-PA 37..275 20..258 605 46 Plus
Dere\GG22028-PA 266 GG22028-PA 30..260 21..254 510 42.3 Plus
Dere\GG22061-PA 272 GG22061-PA 38..266 24..253 493 43.5 Plus
Dere\GG22071-PA 273 GG22071-PA 27..254 25..253 474 42.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:50:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14063-PA 285 GH14063-PA 29..285 1..258 865 59.1 Plus
Dgri\GH14064-PA 269 GH14064-PA 25..268 13..257 646 47.3 Plus
Dgri\GH14252-PA 282 GH14252-PA 31..266 14..252 523 44.4 Plus
Dgri\GH14066-PA 271 GH14066-PA 36..264 23..252 500 43.1 Plus
Dgri\GH14067-PA 282 GH14067-PA 28..252 27..252 479 43.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:00:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG31266-PB 282 CG31266-PB 25..282 1..258 1413 100 Plus
CG31267-PA 275 CG31267-PA 44..275 27..258 637 47.4 Plus
CG5246-PA 272 CG5246-PA 31..265 17..252 527 43.7 Plus
CG31265-PA 266 CG31265-PA 35..260 26..254 489 41.9 Plus
CG31269-PB 273 CG31269-PB 37..261 27..254 481 43.9 Plus
CG17477-PA 267 CG17477-PA 27..253 28..254 480 41 Plus
CG5255-PA 273 CG5255-PA 27..254 25..253 469 41.3 Plus
CG17475-PB 288 CG17475-PB 47..273 25..254 454 41.3 Plus
CG17475-PA 288 CG17475-PA 47..273 25..254 454 41.3 Plus
CG4053-PB 265 CG4053-PB 34..260 27..255 453 40.1 Plus
CG31954-PA 277 CG31954-PA 27..272 14..249 301 30.5 Plus
CG32808-PA 284 CG32808-PA 28..260 26..253 293 33.2 Plus
CG11836-PI 281 CG11836-PI 44..278 27..255 291 31.6 Plus
CG11836-PJ 333 CG11836-PJ 96..330 27..255 291 31.6 Plus
Np-PB 1041 CG34350-PB 794..1035 24..248 286 29.8 Plus
Np-PA 1041 CG34350-PA 794..1035 24..248 286 29.8 Plus
CG9673-PB 261 CG9673-PB 20..256 19..248 285 33.3 Plus
CG9673-PA 261 CG9673-PA 20..256 19..248 285 33.3 Plus
Sb-PB 787 CG4316-PB 536..782 20..248 281 31.6 Plus
Sb-PA 787 CG4316-PA 536..782 20..248 281 31.6 Plus
teq-PD 1450 CG4821-PD 1204..1444 27..253 280 33.7 Plus
teq-PF 2379 CG4821-PF 2133..2373 27..253 280 33.7 Plus
teq-PG 2792 CG4821-PG 2546..2786 27..253 280 33.7 Plus
Ser6-PA 259 CG2071-PA 30..254 26..249 269 32.5 Plus
epsilonTry-PA 256 CG18681-PA 29..252 26..251 267 30.3 Plus
CG3355-PA 314 CG3355-PA 75..310 27..255 266 30.8 Plus
CG4386-PA 372 CG4386-PA 119..362 10..255 264 27.7 Plus
CG4914-PA 374 CG4914-PA 118..368 18..255 264 30.8 Plus
Corin-PC 1397 CG2105-PC 1100..1344 24..249 264 31.7 Plus
Corin-PB 1397 CG2105-PB 1100..1344 24..249 264 31.7 Plus
CG7829-PA 253 CG7829-PA 19..250 19..253 263 31.4 Plus
CG11911-PA 277 CG11911-PA 35..266 26..248 261 29.8 Plus
kappaTry-PC 263 CG12388-PC 17..257 19..252 258 31.6 Plus
CG11836-PF 223 CG11836-PF 12..220 54..255 254 31.9 Plus
CG11836-PE 223 CG11836-PE 12..220 54..255 254 31.9 Plus
CG11836-PG 223 CG11836-PG 12..220 54..255 254 31.9 Plus
CG11836-PC 223 CG11836-PC 12..220 54..255 254 31.9 Plus
CG11836-PA 223 CG11836-PA 12..220 54..255 254 31.9 Plus
CG11836-PB 223 CG11836-PB 12..220 54..255 254 31.9 Plus
CG9372-PA 408 CG9372-PA 173..402 27..248 254 28.1 Plus
CG16749-PA 265 CG16749-PA 24..258 22..249 251 31.2 Plus
CG1304-PA 260 CG1304-PA 30..254 26..249 250 31.9 Plus
CG12951-PA 265 CG12951-PA 22..259 21..250 250 32 Plus
CG32269-PB 332 CG32269-PB 94..329 13..252 250 29.3 Plus
CG32269-PA 332 CG32269-PA 94..329 13..252 250 29.3 Plus
alphaTry-PA 256 CG18444-PA 29..254 26..253 249 29.6 Plus
etaTry-PA 262 CG12386-PA 19..254 19..248 248 29.5 Plus
Try29F-PD 267 CG9564-PD 40..261 26..248 248 29.6 Plus
Try29F-PC 267 CG9564-PC 40..261 26..248 248 29.6 Plus
CG17571-PB 258 CG17571-PB 27..254 24..251 244 31 Plus
CG17571-PA 258 CG17571-PA 27..254 24..251 244 31 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:50:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24439-PA 287 GI24439-PA 26..282 1..255 851 60.1 Plus
Dmoj\GI24440-PA 271 GI24440-PA 22..268 12..257 624 46.4 Plus
Dmoj\GI24441-PA 272 GI24441-PA 39..264 24..251 512 45.6 Plus
Dmoj\GI24438-PA 269 GI24438-PA 39..263 27..254 499 41.7 Plus
Dmoj\GI23144-PA 284 GI23144-PA 19..266 1..251 487 43 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:50:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27273-PA 291 GL27273-PA 24..291 1..258 1051 69.8 Plus
Dper\GL27274-PA 278 GL27274-PA 47..278 27..258 641 49.1 Plus
Dper\GL27272-PA 264 GL27272-PA 34..258 27..254 510 43.4 Plus
Dper\GL27271-PA 271 GL27271-PA 24..261 16..256 492 42.7 Plus
Dper\GL27214-PA 286 GL27214-PA 34..271 15..254 489 44.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:50:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16135-PA 291 GA16135-PA 24..291 1..258 1056 70.1 Plus
Dpse\GA16136-PA 278 GA16136-PA 47..278 27..258 641 49.6 Plus
Dpse\GA18766-PA 280 GA18766-PA 31..256 27..253 495 43.4 Plus
Dpse\GA14522-PA 286 GA14522-PA 34..271 15..254 489 44.8 Plus
Dpse\GA16138-PA 271 GA16138-PA 24..261 16..256 488 42.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:50:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15211-PA 282 GM15211-PA 25..282 1..258 1274 91.1 Plus
Dsec\GM15212-PA 275 GM15212-PA 44..275 27..258 613 47 Plus
Dsec\GM15213-PA 272 GM15213-PA 30..266 16..253 497 42.5 Plus
Dsec\GM15210-PA 266 GM15210-PA 31..260 22..254 485 41.6 Plus
Dsec\GM15384-PA 267 GM15384-PA 27..253 28..254 470 40.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:50:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19142-PA 172 GD19142-PA 1..148 1..150 626 81.3 Plus
Dsim\GD19143-PA 275 GD19143-PA 44..275 27..258 625 47.8 Plus
Dsim\GD19144-PA 272 GD19144-PA 30..266 16..253 497 42.5 Plus
Dsim\GD19141-PA 266 GD19141-PA 31..260 22..254 488 42.1 Plus
Dsim\GD20250-PA 267 GD20250-PA 27..253 28..254 478 41.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:50:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10714-PA 291 GJ10714-PA 34..291 1..258 898 62.9 Plus
Dvir\GJ10715-PA 274 GJ10715-PA 25..272 15..257 661 49 Plus
Dvir\GJ10717-PA 272 GJ10717-PA 39..266 24..253 515 44.2 Plus
Dvir\GJ10718-PA 280 GJ10718-PA 32..257 27..253 481 43.4 Plus
Dvir\GJ10713-PA 268 GJ10713-PA 22..262 11..254 476 38.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:50:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12197-PA 288 GK12197-PA 24..285 1..255 964 66.8 Plus
Dwil\GK12198-PA 274 GK12198-PA 26..273 3..257 582 45.1 Plus
Dwil\GK12196-PA 282 GK12196-PA 30..257 24..254 517 45 Plus
Dwil\GK12195-PA 272 GK12195-PA 36..260 27..254 505 46.1 Plus
Dwil\GK12200-PA 276 GK12200-PA 23..270 10..253 475 40.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:50:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24615-PA 282 GE24615-PA 25..282 1..258 1279 91.1 Plus
Dyak\GE10111-PA 275 GE10111-PA 23..275 12..258 630 46.2 Plus
Dyak\GE10112-PA 272 GE10112-PA 30..266 16..253 499 42.5 Plus
Dyak\GE24614-PA 266 GE24614-PA 30..260 21..254 491 41.5 Plus
Dyak\GE26106-PA 267 GE26106-PA 27..252 28..253 473 42.1 Plus