BDGP Sequence Production Resources |
Search the DGRC for LP09118
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 91 |
Well: | 18 |
Vector: | pOT2 |
Associated Gene/Transcript | cactin-RB |
Protein status: | LP09118.pep: gold |
Sequenced Size: | 2360 |
Gene | Date | Evidence |
---|---|---|
cactin | 2011-08-09 | Manual selection by Sue Celniker |
2360 bp assembled on 2011-10-17
GenBank Submission: BT132738.1
> LP09118.complete TTGGTTTTCTCCATCTGGCAACGCTAGCATTGTTTATATTTTATTTCACA AGTTTTATCCCGAAAAACTCATTAAAAAAGATGCCCAAGGAGAAATCCAA GCACCGGCATCGCAGCCGCAGTCGGGAGAGGCGGGATCATCGCAGTCCGG ATCCGAGGAGCAGCAGGAACAGGGATCGGGATCGTGAACGCGAGCGGGAA AAGGATCGTGACCACAGAGATCACAGAGACAAGGAACGTGACCAGCGCAG GGAAAGGGAAAAGGACAAAAGCAGGGACAAGAAGCGGGAGCACAAAAGCC GGAGACGCCGGTCCTCTTCCTCCAGCTCATCCCCGTCGAGTTCGACGTCC AGCTCGGTGCCCGGTGCCCCTCGTTCGCCGCTGGTAAAAAGCCCGATGAA GCTTCTCCAGACGCTGGAAGCCCGTCGCCTCGTCGAGCAGAAGGATCGTC AGCGTAAAAAGGAGGAGCTGAAGGCCCATGAAACGCCCGAGGAGAAGCGC GCCCGTCGCCTGCGCGAAAAGCAGGCCAAGGAGCAGCGGCGTCGCGAACG AATGGGCTGGGACAACGAGTACCAGACGTACTCCAACGAAGACAACCCGT TCGGGGACTCCAATCTCACCTCCACCTTCCACTGGGGCAAAAAGCTGGAG GTAGAGGGACTATCAAATCTCTCCACCAAAACCGTAGAGGTACTGTCTCT GCAAAAGCAGTTGGAAAATCGCAGGGAGCTGGAGAAGGTCAAGAAACGGC GTCAGGAGAGGGAGCTGGAGCGGCAGGTGCGCGAGGATGATCTTATGATG CAGCAGCGCGCCAAGGAGGCGGTGCAGTTCCGCGAGTGGCAGCGACAGGA AGATCAGTTTCACTTAGAGCAGGCACGCTTGCGCAGTGAAATCCGGATCC GAGATGGACGTGCCAAGCCCATCGATCTTCTCGCCCAATATGTGGCCGCT GGGAATGAGCCGCTCGAAGAGTGCCTCGAGATGCAGATGCACGAGCCCTA TGTGCTGCTAAACGGCCTGCCCGTGGAAGAACTGGAGGACCTGCTGGTCG ACATTAAGGTATACGAAGAGCTGGAGCAGGGCAAGCACATCGATTTCTGG AACGATATGATCACCATTGTGCAGGATGAACTGCAGCGCCAACAGAAACT GGAGGCGGAGAATAGTTCGCTCAATCAACGCCGGGATGGCATCCACCAGG CGGTGGTAAAGGATGTGGCCGATATTTTTAGGGGGAAGAATGCTCAGCAG CTGGAGGAGATGCGGCACCGCATCGAGGCCAAGATCAGTGGGCGAGCGGA TGGCGTCGACATTAGCTACTGGGAAAGCCTGCTCTCGCAACTCAAGGCAC ACATGGCCAGAGCTCGACTGCGAGATCGCCATCAAGCCTTATTGCGCGAG AAGCTGTCGCTGCTCAAGCGAGAAAACGATAATGAGACGTTGCAAGAGAA GGTGGCCCCACAAGTCAAGGAAGAGGAGATGGAAACCCAGGACGCAGAGG ACCCGGAGGTTGAGGAGGGCTCACCCGAAGACGAGGAGGATCCCCTGAAT GAGCTGCGTAAAACAGTGCGTCTTTACCAGGCAGGGAACTACAGCCCGCG CTATATACGCGAAGAGGACTTCACCGGCAGACGAGCGCAAAACGAAGACG TCGACGAACCGGAGGCAGAAGGACTTCTCTACGAGGAGGAGGACGACGAG CGGCGAACACAGAGACAGCGTCTGCTAATCCTTCATCCAGAACGAGTGGA TAACAATCAACTGACCCCGCAGGAACTGCGAATGCGCAACGAGGCGAAGC AGGGAATGCAGGGTGACGAGGCCGAGTTCAGTGTGGAGACCACCCTGGAT GCAGTGCCGCAGCTGGCCACCGATAAGTACCGACCACGAAAGCCGCGCTA CTTCAATCGCGTGCACACCGGCTTCGAGTGGAACAAGTACAACCAGACGC ACTACGACATGGACAATCCCCCGCCCAAGATCGTGCAGGGATACAAGTTC AACATATTCTATCCGGACCTTATGGACAAATCGCAGACGCCGCAGTACTT CCTCACTCCCTGCGCGGACAACGGGGACTTTGCGGTGCTGCGTTTCCACA CAGGACCACCGTACGAGGACATCGCCTTCAAGATCGTCAACCGGGAGTGG GAGTTTAGCTACAAGCGGGGCTTCCGCTGCCAGTTCCACAACAACATCTT CCAGCTGTGGTTCCACTTCAAGCGCTATCGCTACAGGCGGTGAAGGATTG TCACCGTCTGGCCTAGATTACCCAAACCATCCTTTTGTGCAGTCCTATGT TATTTTCCAATAAAGTGTAAGCCCAGAACAACTAAAAAAAAAAAAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 20289584..20291916 | 1..2333 | 11665 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 20424074..20426407 | 1..2334 | 11670 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 20409166..20411499 | 1..2334 | 11670 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 20289584..20291916 | 1..2333 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cactin-RA | 47..2289 | 1..2243 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cactin-RB | 1..2163 | 81..2243 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cactin-RB | 1..2163 | 81..2243 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cactin-RA | 95..2423 | 1..2329 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cactin-RB | 6..2334 | 1..2329 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cactin-RB | 6..2334 | 1..2329 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20424074..20426406 | 1..2333 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20424074..20426406 | 1..2333 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20424074..20426406 | 1..2333 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 20295101..20297433 | 1..2333 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20409166..20411498 | 1..2333 | 100 | Plus |
Translation from 2 to 2242
> LP09118.pep GFLHLATLALFIFYFTSFIPKNSLKKMPKEKSKHRHRSRSRERRDHRSPD PRSSRNRDRDREREREKDRDHRDHRDKERDQRREREKDKSRDKKREHKSR RRRSSSSSSSPSSSTSSSVPGAPRSPLVKSPMKLLQTLEARRLVEQKDRQ RKKEELKAHETPEEKRARRLREKQAKEQRRRERMGWDNEYQTYSNEDNPF GDSNLTSTFHWGKKLEVEGLSNLSTKTVEVLSLQKQLENRRELEKVKKRR QERELERQVREDDLMMQQRAKEAVQFREWQRQEDQFHLEQARLRSEIRIR DGRAKPIDLLAQYVAAGNEPLEECLEMQMHEPYVLLNGLPVEELEDLLVD IKVYEELEQGKHIDFWNDMITIVQDELQRQQKLEAENSSLNQRRDGIHQA VVKDVADIFRGKNAQQLEEMRHRIEAKISGRADGVDISYWESLLSQLKAH MARARLRDRHQALLREKLSLLKRENDNETLQEKVAPQVKEEEMETQDAED PEVEEGSPEDEEDPLNELRKTVRLYQAGNYSPRYIREEDFTGRRAQNEDV DEPEAEGLLYEEEDDERRTQRQRLLILHPERVDNNQLTPQELRMRNEAKQ GMQGDEAEFSVETTLDAVPQLATDKYRPRKPRYFNRVHTGFEWNKYNQTH YDMDNPPPKIVQGYKFNIFYPDLMDKSQTPQYFLTPCADNGDFAVLRFHT GPPYEDIAFKIVNREWEFSYKRGFRCQFHNNIFQLWFHFKRYRYRR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19092-PA | 722 | GF19092-PA | 44..722 | 77..746 | 2820 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19290-PA | 718 | GG19290-PA | 1..718 | 27..746 | 3298 | 92.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17778-PA | 769 | GH17778-PA | 129..769 | 132..746 | 2630 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
cactin-PB | 720 | CG1676-PB | 1..720 | 27..746 | 3773 | 100 | Plus |
CG2839-PA | 826 | CG2839-PA | 281..742 | 20..572 | 243 | 21.1 | Plus |
CG7971-PG | 1062 | CG7971-PG | 385..632 | 20..283 | 204 | 25.7 | Plus |
CG7971-PA | 1062 | CG7971-PA | 385..632 | 20..283 | 204 | 25.7 | Plus |
CG7971-PC | 1107 | CG7971-PC | 385..632 | 20..283 | 204 | 25.7 | Plus |
CG7971-PF | 1655 | CG7971-PF | 610..857 | 20..283 | 204 | 25.7 | Plus |
CG6227-PA | 1224 | CG6227-PA | 72..241 | 21..199 | 194 | 27.8 | Plus |
CG31551-PA | 1393 | CG31551-PA | 228..866 | 24..600 | 194 | 20.5 | Plus |
CG10600-PC | 1376 | CG10600-PC | 199..340 | 21..162 | 192 | 34.2 | Plus |
CG10600-PA | 1377 | CG10600-PA | 200..341 | 21..162 | 192 | 34.2 | Plus |
CG10600-PB | 1406 | CG10600-PB | 229..370 | 21..162 | 192 | 34.2 | Plus |
CG31712-PA | 290 | CG31712-PA | 10..240 | 28..293 | 190 | 27.6 | Plus |
CG7971-PG | 1062 | CG7971-PG | 359..615 | 37..301 | 189 | 23.5 | Plus |
CG7971-PG | 1062 | CG7971-PG | 488..651 | 29..180 | 189 | 26.8 | Plus |
CG7971-PA | 1062 | CG7971-PA | 359..615 | 37..301 | 189 | 23.5 | Plus |
CG7971-PA | 1062 | CG7971-PA | 488..651 | 29..180 | 189 | 26.8 | Plus |
CG7971-PC | 1107 | CG7971-PC | 359..615 | 37..301 | 189 | 23.5 | Plus |
CG7971-PC | 1107 | CG7971-PC | 488..651 | 29..180 | 189 | 26.8 | Plus |
CG7971-PF | 1655 | CG7971-PF | 584..840 | 37..301 | 189 | 23.5 | Plus |
CG7971-PF | 1655 | CG7971-PF | 713..876 | 29..180 | 189 | 26.8 | Plus |
rgn-PD | 800 | CG6014-PD | 228..747 | 28..627 | 189 | 20.6 | Plus |
rgn-PA | 800 | CG6014-PA | 228..747 | 28..627 | 189 | 20.6 | Plus |
rgn-PC | 808 | CG6014-PC | 236..755 | 28..627 | 189 | 20.6 | Plus |
rgn-PB | 808 | CG6014-PB | 236..755 | 28..627 | 189 | 20.6 | Plus |
CG7971-PG | 1062 | CG7971-PG | 242..504 | 25..300 | 184 | 23.4 | Plus |
CG7971-PA | 1062 | CG7971-PA | 242..504 | 25..300 | 184 | 23.4 | Plus |
CG7971-PC | 1107 | CG7971-PC | 242..504 | 25..300 | 184 | 23.4 | Plus |
CG7971-PF | 1655 | CG7971-PF | 467..729 | 25..300 | 184 | 23.4 | Plus |
CG2839-PA | 826 | CG2839-PA | 587..794 | 29..249 | 181 | 24.9 | Plus |
CG6340-PB | 513 | CG6340-PB | 105..257 | 29..183 | 178 | 30.3 | Plus |
CG4119-PB | 998 | CG4119-PB | 350..546 | 21..244 | 177 | 24.7 | Plus |
CG4119-PA | 998 | CG4119-PA | 350..546 | 21..244 | 177 | 24.7 | Plus |
CG31712-PB | 284 | CG31712-PB | 10..218 | 28..263 | 174 | 28.4 | Plus |
ncm-PA | 1330 | CG12750-PA | 979..1255 | 20..304 | 173 | 21.2 | Plus |
Fip1-PA | 701 | CG1078-PA | 575..695 | 14..133 | 168 | 29.8 | Plus |
CG8273-PB | 874 | CG8273-PB | 131..362 | 25..271 | 166 | 23.4 | Plus |
CG8273-PA | 874 | CG8273-PA | 131..362 | 25..271 | 166 | 23.4 | Plus |
SF1-PC | 323 | CG5836-PC | 37..132 | 21..112 | 165 | 40.6 | Plus |
SF1-PB | 347 | CG5836-PB | 37..132 | 21..112 | 165 | 40.6 | Plus |
CG12239-PA | 650 | CG12239-PA | 54..574 | 30..587 | 165 | 21 | Plus |
SF1-PA | 787 | CG5836-PA | 37..132 | 21..112 | 165 | 40.6 | Plus |
CG12075-PD | 994 | CG12075-PD | 398..568 | 20..197 | 165 | 26.9 | Plus |
CG12075-PE | 1006 | CG12075-PE | 410..580 | 20..197 | 165 | 26.9 | Plus |
CG12075-PC | 1006 | CG12075-PC | 410..580 | 20..197 | 165 | 26.9 | Plus |
CG12075-PB | 1006 | CG12075-PB | 410..580 | 20..197 | 165 | 26.9 | Plus |
CG12075-PA | 1006 | CG12075-PA | 410..580 | 20..197 | 165 | 26.9 | Plus |
CG6227-PA | 1224 | CG6227-PA | 9..233 | 55..284 | 164 | 25.9 | Plus |
CG10333-PA | 822 | CG10333-PA | 6..172 | 35..181 | 164 | 29 | Plus |
Caper-PB | 594 | CG11266-PB | 64..206 | 29..169 | 163 | 28.9 | Plus |
Caper-PA | 594 | CG11266-PA | 64..206 | 29..169 | 163 | 28.9 | Plus |
CG6686-PA | 970 | CG6686-PA | 5..252 | 22..273 | 163 | 25.6 | Plus |
CG12877-PC | 991 | CG12877-PC | 175..263 | 29..118 | 163 | 38.9 | Plus |
CG11808-PA | 219 | CG11808-PA | 4..79 | 44..118 | 162 | 51.9 | Plus |
BOD1-PC | 1109 | CG5514-PC | 582..738 | 23..182 | 162 | 26.2 | Plus |
BOD1-PA | 1109 | CG5514-PA | 582..738 | 23..182 | 162 | 26.2 | Plus |
BOD1-PD | 1150 | CG5514-PD | 582..738 | 23..182 | 162 | 26.2 | Plus |
BOD1-PB | 1150 | CG5514-PB | 582..738 | 23..182 | 162 | 26.2 | Plus |
BOD1-PE | 1151 | CG5514-PE | 582..738 | 23..182 | 162 | 26.2 | Plus |
CG6340-PB | 513 | CG6340-PB | 126..275 | 25..171 | 159 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15124-PA | 766 | GI15124-PA | 125..766 | 115..746 | 2658 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15935-PA | 232 | GL15935-PA | 10..232 | 529..746 | 1054 | 86.2 | Plus |
Dper\GL15934-PA | 218 | GL15934-PA | 20..206 | 49..241 | 581 | 65.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25716-PA | 743 | GA25716-PA | 20..743 | 49..746 | 2737 | 75.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23033-PA | 378 | GM23033-PA | 1..378 | 369..746 | 2035 | 99.2 | Plus |
Dsec\GM23032-PA | 306 | GM23032-PA | 1..306 | 27..335 | 1121 | 90 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18982-PA | 762 | GJ18982-PA | 20..762 | 31..746 | 2683 | 73.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25491-PA | 777 | GK25491-PA | 114..777 | 121..746 | 2664 | 77.6 | Plus |
Translation from 2 to 2242
> LP09118.hyp GFLHLATLALFIFYFTSFIPKNSLKKMPKEKSKHRHRSRSRERRDHRSPD PRSSRNRDRDREREREKDRDHRDHRDKERDQRREREKDKSRDKKREHKSR RRRSSSSSSSPSSSTSSSVPGAPRSPLVKSPMKLLQTLEARRLVEQKDRQ RKKEELKAHETPEEKRARRLREKQAKEQRRRERMGWDNEYQTYSNEDNPF GDSNLTSTFHWGKKLEVEGLSNLSTKTVEVLSLQKQLENRRELEKVKKRR QERELERQVREDDLMMQQRAKEAVQFREWQRQEDQFHLEQARLRSEIRIR DGRAKPIDLLAQYVAAGNEPLEECLEMQMHEPYVLLNGLPVEELEDLLVD IKVYEELEQGKHIDFWNDMITIVQDELQRQQKLEAENSSLNQRRDGIHQA VVKDVADIFRGKNAQQLEEMRHRIEAKISGRADGVDISYWESLLSQLKAH MARARLRDRHQALLREKLSLLKRENDNETLQEKVAPQVKEEEMETQDAED PEVEEGSPEDEEDPLNELRKTVRLYQAGNYSPRYIREEDFTGRRAQNEDV DEPEAEGLLYEEEDDERRTQRQRLLILHPERVDNNQLTPQELRMRNEAKQ GMQGDEAEFSVETTLDAVPQLATDKYRPRKPRYFNRVHTGFEWNKYNQTH YDMDNPPPKIVQGYKFNIFYPDLMDKSQTPQYFLTPCADNGDFAVLRFHT GPPYEDIAFKIVNREWEFSYKRGFRCQFHNNIFQLWFHFKRYRYRR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
cactin-PB | 720 | CG1676-PB | 1..720 | 27..746 | 3773 | 100 | Plus |
CG2839-PA | 826 | CG2839-PA | 281..742 | 20..572 | 243 | 21.1 | Plus |
CG7971-PG | 1062 | CG7971-PG | 385..632 | 20..283 | 204 | 25.7 | Plus |
CG7971-PA | 1062 | CG7971-PA | 385..632 | 20..283 | 204 | 25.7 | Plus |
CG7971-PC | 1107 | CG7971-PC | 385..632 | 20..283 | 204 | 25.7 | Plus |
CG7971-PG | 1062 | CG7971-PG | 359..615 | 37..301 | 189 | 23.5 | Plus |
CG7971-PG | 1062 | CG7971-PG | 488..651 | 29..180 | 189 | 26.8 | Plus |
CG7971-PA | 1062 | CG7971-PA | 359..615 | 37..301 | 189 | 23.5 | Plus |
CG7971-PA | 1062 | CG7971-PA | 488..651 | 29..180 | 189 | 26.8 | Plus |
CG7971-PG | 1062 | CG7971-PG | 242..504 | 25..300 | 184 | 23.4 | Plus |
CG7971-PA | 1062 | CG7971-PA | 242..504 | 25..300 | 184 | 23.4 | Plus |
CG2839-PA | 826 | CG2839-PA | 587..794 | 29..249 | 181 | 24.9 | Plus |