BDGP Sequence Production Resources |
Search the DGRC for LP09315
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 93 |
Well: | 15 |
Vector: | pOT2 |
Associated Gene/Transcript | Sod3-RA |
Protein status: | LP09315.pep: gold |
Sequenced Size: | 1070 |
Gene | Date | Evidence |
---|---|---|
CG9027 | 2002-11-16 | Blastp of sequenced clone |
CG9027 | 2008-04-29 | Release 5.5 accounting |
CG9027 | 2008-08-15 | Release 5.9 accounting |
CG9027 | 2008-12-18 | 5.12 accounting |
1070 bp (1070 high quality bases) assembled on 2002-11-16
GenBank Submission: BT003225
> LP09315.complete CAGGTTTCCAACGGTACAGAGGTGCAATCGCTTAATTCTCGCAAAAAACA ATCAGTACCCAATTATAAAATAGTTGCTAACAAGATCGTTTCAGAACTCG AGCGTGCAAGATCGCCAGCATATCGCAGACACATTGATAAGACCGTAAGG AAACCGGACCCATAAACAAATATTGCCCCGATAAAGTGTGACACCCATCC ATTTCATTTGTGGAACTTTGGAAGCGAATTCAAAATGATGCAATATCTTG TTGTTAGCCTGGCACTCTGTGCCACAATTTGCTCTGCTGCGCAGACGCGC AATATGCCCATTCAAGCCATTGCCTATCTGATTGGACCCGTGCAATCGGA TAATACCCAGGTCAAGGGCAACGTGACCTTTACGCAGAACGACTGTGGCC AGAATGTCCATGTGCGCGTCCAGCTGGAGGGATTGAAGGAGGGCAAGCAC GGCTTCCACATTCACGAGAAGGGAGATCTGACCAATGGATGCATCAGCAT GGGTGCTCACTATAACCCCGATAAGGTTGATCACGGTGGCCCCGATCACG AGGTGCGTCATGTTGGCGATCTGGGCAACCTGGAGGCCAACTCCACGGGC ATTATCGACGTTACATACACGGATCAGGTGATCACCTTAACTGGCAAGCT GGGGATCATTGGCAGGGGAGTTGTTGTCCACGAATTGGAGGATGATCTCG GTCTGGGCAACCACACGGATTCCAAGAAGACCGGCAATGCAGGCGGCCGC ATTGCCTGTGGTGTTATTGGCATCAAGTAAATATCCCTTCCAACGTGTCA GCCAAATCAATATGCTGCTCGAATACTTTATGTGTAGTTGTGTAACTCCA GGCGTAGTAACTAATGAAATGTTTTCCCAATTTTCCCAATTCCCCCACCC ACAATCACACTCACCCTTACATGTTTGGCTTACACATTTCCCTCAATTAA TTGTCTCAGTTCACTGACTCACTCGATTTGCCGTGTGTGTGTTTGTGTGT AATAAAATCAACAAAAATTAACCGAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9027-RB | 1133 | CG9027-RB | 102..1128 | 1..1027 | 5135 | 100 | Plus |
CG9027-RC | 2635 | CG9027-RC | 1792..2590 | 229..1027 | 3995 | 100 | Plus |
CG9027.a | 1641 | CG9027.a | 843..1641 | 229..1027 | 3995 | 100 | Plus |
CG9027-RC | 2635 | CG9027-RC | 1031..1177 | 82..228 | 735 | 100 | Plus |
CG9027.a | 1641 | CG9027.a | 93..228 | 93..228 | 680 | 100 | Plus |
CG9027.a | 1641 | CG9027.a | 11..95 | 1..85 | 425 | 100 | Plus |
CG9027-RC | 2635 | CG9027-RC | 11..94 | 1..84 | 420 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 7268774..7269044 | 1024..754 | 1340 | 99.6 | Minus |
chr2R | 21145070 | chr2R | 7269391..7269625 | 531..297 | 1160 | 99.6 | Minus |
chr2R | 21145070 | chr2R | 7269112..7269342 | 754..524 | 1110 | 98.7 | Minus |
chr2R | 21145070 | chr2R | 7270374..7270520 | 228..82 | 705 | 98.6 | Minus |
chr2R | 21145070 | chr2R | 7271457..7271540 | 84..1 | 420 | 100 | Minus |
chr2R | 21145070 | chr2R | 7269691..7269759 | 297..229 | 330 | 98.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 11381322..11381595 | 1027..754 | 1370 | 100 | Minus |
2R | 25286936 | 2R | 11381949..11382183 | 531..297 | 1160 | 99.6 | Minus |
2R | 25286936 | 2R | 11381663..11381893 | 754..524 | 1155 | 100 | Minus |
2R | 25286936 | 2R | 11382932..11383078 | 228..82 | 735 | 100 | Minus |
2R | 25286936 | 2R | 11384015..11384098 | 84..1 | 420 | 100 | Minus |
2R | 25286936 | 2R | 11382249..11382317 | 297..229 | 345 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 11382521..11382794 | 1027..754 | 1370 | 100 | Minus |
2R | 25260384 | 2R | 11383148..11383382 | 531..297 | 1160 | 99.5 | Minus |
2R | 25260384 | 2R | 11382862..11383092 | 754..524 | 1155 | 100 | Minus |
2R | 25260384 | 2R | 11384131..11384277 | 228..82 | 735 | 100 | Minus |
2R | 25260384 | 2R | 11385214..11385297 | 84..1 | 420 | 100 | Minus |
2R | 25260384 | 2R | 11383448..11383516 | 297..229 | 345 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbif\P-element_M | 2935 | Dbif\P-element_M P_M 2935bp Derived from X60990. | 2245..2353 | 891..787 | 119 | 62.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 7270374..7270517 | 85..228 | 98 | <- | Minus |
chr2R | 7271457..7271540 | 1..84 | 100 | Minus | |
chr2R | 7268774..7269043 | 755..1024 | 99 | <- | Minus |
chr2R | 7269112..7269340 | 526..754 | 98 | <- | Minus |
chr2R | 7269397..7269624 | 298..525 | 100 | <- | Minus |
chr2R | 7269691..7269759 | 229..297 | 98 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9027-RC | 12..567 | 224..780 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9027-RC | 12..567 | 224..780 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sod3-RB | 1..546 | 235..780 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9027-RC | 12..567 | 224..780 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sod3-RB | 1..546 | 235..780 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9027-RB | 11..1034 | 1..1024 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9027-RB | 11..1034 | 1..1024 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sod3-RB | 17..1040 | 1..1024 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9027-RB | 11..1034 | 1..1024 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sod3-RB | 17..1040 | 1..1024 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11381325..11381594 | 755..1024 | 100 | <- | Minus |
2R | 11381663..11381891 | 526..754 | 100 | <- | Minus |
2R | 11381955..11382182 | 298..525 | 100 | <- | Minus |
2R | 11382249..11382317 | 229..297 | 100 | <- | Minus |
2R | 11382932..11383075 | 85..228 | 100 | <- | Minus |
2R | 11384015..11384098 | 1..84 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11381325..11381594 | 755..1024 | 100 | <- | Minus |
2R | 11381663..11381891 | 526..754 | 100 | <- | Minus |
2R | 11381955..11382182 | 298..525 | 100 | <- | Minus |
2R | 11382249..11382317 | 229..297 | 100 | <- | Minus |
2R | 11382932..11383075 | 85..228 | 100 | <- | Minus |
2R | 11384015..11384098 | 1..84 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11381325..11381594 | 755..1024 | 100 | <- | Minus |
2R | 11381663..11381891 | 526..754 | 100 | <- | Minus |
2R | 11381955..11382182 | 298..525 | 100 | <- | Minus |
2R | 11382249..11382317 | 229..297 | 100 | <- | Minus |
2R | 11382932..11383075 | 85..228 | 100 | <- | Minus |
2R | 11384015..11384098 | 1..84 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 7271520..7271603 | 1..84 | 100 | Minus | |
arm_2R | 7268830..7269099 | 755..1024 | 100 | <- | Minus |
arm_2R | 7269168..7269396 | 526..754 | 100 | <- | Minus |
arm_2R | 7269460..7269687 | 298..525 | 100 | <- | Minus |
arm_2R | 7269754..7269822 | 229..297 | 100 | <- | Minus |
arm_2R | 7270437..7270580 | 85..228 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11384131..11384274 | 85..228 | 100 | <- | Minus |
2R | 11385214..11385297 | 1..84 | 100 | Minus | |
2R | 11382524..11382793 | 755..1024 | 100 | <- | Minus |
2R | 11382862..11383090 | 526..754 | 100 | <- | Minus |
2R | 11383154..11383381 | 298..525 | 100 | <- | Minus |
2R | 11383448..11383516 | 229..297 | 100 | <- | Minus |
Translation from 234 to 779
> LP09315.hyp MMQYLVVSLALCATICSAAQTRNMPIQAIAYLIGPVQSDNTQVKGNVTFT QNDCGQNVHVRVQLEGLKEGKHGFHIHEKGDLTNGCISMGAHYNPDKVDH GGPDHEVRHVGDLGNLEANSTGIIDVTYTDQVITLTGKLGIIGRGVVVHE LEDDLGLGNHTDSKKTGNAGGRIACGVIGIK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sod3-PA | 181 | CG9027-PA | 1..181 | 1..181 | 960 | 100 | Plus |
Sod3-PB | 181 | CG9027-PB | 1..181 | 1..181 | 960 | 100 | Plus |
Sod3-PD | 217 | CG9027-PD | 1..180 | 1..180 | 955 | 100 | Plus |
Sod3-PE | 243 | CG9027-PE | 1..180 | 1..180 | 955 | 100 | Plus |
Sod-PA | 153 | CG11793-PA | 10..150 | 40..180 | 374 | 55.3 | Plus |
Translation from 234 to 779
> LP09315.pep MMQYLVVSLALCATICSAAQTRNMPIQAIAYLIGPVQSDNTQVKGNVTFT QNDCGQNVHVRVQLEGLKEGKHGFHIHEKGDLTNGCISMGAHYNPDKVDH GGPDHEVRHVGDLGNLEANSTGIIDVTYTDQVITLTGKLGIIGRGVVVHE LEDDLGLGNHTDSKKTGNAGGRIACGVIGIK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12396-PA | 210 | GF12396-PA | 1..173 | 2..180 | 759 | 82.1 | Plus |
Dana\GF24570-PA | 153 | GF24570-PA | 1..150 | 24..180 | 348 | 51 | Plus |
Dana\GF18703-PA | 124 | GF18703-PA | 9..121 | 68..180 | 287 | 54.9 | Plus |
Dana\GF11145-PA | 263 | GF11145-PA | 86..225 | 39..178 | 268 | 44.1 | Plus |
Dana\GF16781-PA | 267 | GF16781-PA | 94..245 | 27..180 | 153 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22650-PA | 181 | GG22650-PA | 1..181 | 1..181 | 904 | 95 | Plus |
Dere\Sod-PA | 153 | GG13936-PA | 10..150 | 40..180 | 349 | 54.6 | Plus |
Dere\GG25230-PA | 264 | GG25230-PA | 86..226 | 39..178 | 248 | 43.8 | Plus |
Dere\GG11434-PA | 270 | GG11434-PA | 94..245 | 27..180 | 161 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20507-PA | 181 | GH20507-PA | 1..181 | 1..181 | 782 | 79 | Plus |
Dgri\GH11755-PA | 181 | GH11755-PA | 1..181 | 1..181 | 759 | 77.3 | Plus |
Dgri\GH14640-PA | 153 | GH14640-PA | 10..150 | 40..180 | 354 | 54.6 | Plus |
Dgri\GH19972-PA | 285 | GH19972-PA | 108..248 | 39..179 | 274 | 46.5 | Plus |
Dgri\GH22309-PA | 256 | GH22309-PA | 90..240 | 27..180 | 175 | 30.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sod3-PF | 181 | CG9027-PF | 1..181 | 1..181 | 960 | 100 | Plus |
Sod3-PA | 181 | CG9027-PA | 1..181 | 1..181 | 960 | 100 | Plus |
Sod3-PB | 181 | CG9027-PB | 1..181 | 1..181 | 960 | 100 | Plus |
Sod3-PD | 217 | CG9027-PD | 1..180 | 1..180 | 955 | 100 | Plus |
Sod3-PE | 243 | CG9027-PE | 1..180 | 1..180 | 955 | 100 | Plus |
Sod1-PA | 153 | CG11793-PA | 10..150 | 40..180 | 374 | 55.3 | Plus |
Sod1-PD | 167 | CG11793-PD | 30..164 | 46..180 | 361 | 55.6 | Plus |
Ccs-PC | 258 | CG17753-PC | 80..220 | 39..178 | 275 | 43.8 | Plus |
Ccs-PB | 264 | CG17753-PB | 86..226 | 39..178 | 275 | 43.8 | Plus |
CG5948-PB | 269 | CG5948-PB | 93..244 | 27..180 | 170 | 29 | Plus |
CG5948-PA | 270 | CG5948-PA | 94..245 | 27..180 | 170 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21051-PA | 181 | GI21051-PA | 1..181 | 1..181 | 784 | 79 | Plus |
Dmoj\GI11624-PA | 153 | GI11624-PA | 10..150 | 40..180 | 347 | 54.6 | Plus |
Dmoj\GI20259-PA | 236 | GI20259-PA | 86..219 | 39..172 | 250 | 44.5 | Plus |
Dmoj\GI22979-PA | 271 | GI22979-PA | 105..247 | 37..180 | 166 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10397-PA | 277 | GL10397-PA | 1..180 | 1..180 | 819 | 82.8 | Plus |
Dper\Sod-PA | 152 | GL22843-PA | 9..149 | 40..180 | 350 | 53.9 | Plus |
Dper\GL20081-PA | 263 | GL20081-PA | 86..225 | 39..178 | 259 | 42 | Plus |
Dper\GL21798-PA | 267 | GL21798-PA | 95..246 | 27..180 | 163 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA30465-PA | 258 | GA30465-PA | 1..181 | 1..181 | 830 | 82.9 | Plus |
Dpse\GA30465-PB | 181 | GA30465-PB | 1..181 | 1..181 | 824 | 82.9 | Plus |
Dpse\Sod-PA | 152 | GA11202-PA | 9..149 | 40..180 | 350 | 53.9 | Plus |
Dpse\GA14646-PA | 263 | GA14646-PA | 86..225 | 39..178 | 259 | 42 | Plus |
Dpse\GA19252-PA | 266 | GA19252-PA | 94..245 | 27..180 | 163 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20432-PA | 181 | GM20432-PA | 1..181 | 1..181 | 930 | 97.2 | Plus |
Dsec\Sod-PA | 153 | GM24771-PA | 10..150 | 40..180 | 353 | 55.3 | Plus |
Dsec\GM20549-PA | 264 | GM20549-PA | 86..226 | 39..178 | 248 | 43.8 | Plus |
Dsec\GM10274-PA | 270 | GM10274-PA | 94..245 | 27..180 | 159 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25903-PA | 181 | GD25903-PA | 1..181 | 1..181 | 936 | 98.3 | Plus |
Dsim\Sod-PA | 153 | GD12822-PA | 10..150 | 40..180 | 353 | 55.3 | Plus |
Dsim\GD26004-PA | 264 | GD26004-PA | 86..226 | 39..178 | 250 | 44.4 | Plus |
Dsim\GD21244-PA | 270 | GD21244-PA | 94..245 | 27..180 | 163 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21975-PA | 181 | GJ21975-PA | 1..181 | 1..181 | 761 | 76.8 | Plus |
Dvir\Sod-PA | 153 | GJ11304-PA | 10..150 | 40..180 | 353 | 55.3 | Plus |
Dvir\GJ20212-PA | 263 | GJ20212-PA | 86..225 | 39..178 | 266 | 44.8 | Plus |
Dvir\GJ24673-PA | 268 | GJ24673-PA | 94..244 | 27..180 | 169 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21886-PA | 181 | GK21886-PA | 1..181 | 1..181 | 790 | 80.7 | Plus |
Dwil\GK13564-PA | 157 | GK13564-PA | 1..154 | 1..157 | 614 | 74.5 | Plus |
Dwil\Sod-PA | 153 | GK20556-PA | 10..150 | 40..180 | 374 | 56.7 | Plus |
Dwil\GK23033-PA | 252 | GK23033-PA | 87..215 | 39..179 | 175 | 35.2 | Plus |
Dwil\GK12866-PA | 257 | GK12866-PA | 98..235 | 41..178 | 156 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13524-PA | 181 | GE13524-PA | 1..181 | 1..181 | 914 | 95.6 | Plus |
Dyak\Sod-PA | 153 | GE20235-PA | 10..150 | 40..180 | 344 | 53.9 | Plus |
Dyak\GE21764-PA | 264 | GE21764-PA | 86..226 | 39..178 | 258 | 44.4 | Plus |
Dyak\GE23628-PA | 270 | GE23628-PA | 108..245 | 43..180 | 158 | 30.1 | Plus |