BDGP Sequence Production Resources |
Search the DGRC for LP09416
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 94 |
Well: | 16 |
Vector: | pOT2 |
Associated Gene/Transcript | kermit-RA |
Protein status: | LP09416.pep: gold |
Preliminary Size: | 2104 |
Sequenced Size: | 2044 |
Gene | Date | Evidence |
---|---|---|
CG11546 | 2001-09-19 | Blastp of sequenced clone |
CG11546 | 2003-01-01 | Sim4 clustering to Release 3 |
kermit | 2008-04-29 | Release 5.5 accounting |
kermit | 2008-08-15 | Release 5.9 accounting |
kermit | 2008-12-18 | 5.12 accounting |
2044 bp (2044 high quality bases) assembled on 2001-09-19
GenBank Submission: AY060451
> LP09416.complete CGAGGTCCGAATTTTCGAGCGCAGCGCGGCCACAATTTTCCGGGCGTTAG TTAACCGAGACGACTAGTTTAATTAGCGGAATTGTGCGACGACGTCGTGG TTGAAATTCAATTTGAACGCCCAGGCGGTAGATCGGTAAAATCGCGACAT CAAAGCACGAGAGTGAGTGAAAAGAGAACCCTGGAAAGTGGTCAATGTGT GTGTATTTGGCGAGCAGTGGCGGAGCACTGAAAAAACCAGTTAGCTGGCA GTGAAAGAGATTCAATAACGTGTTGGTGGGCAAAAGAAGAACAAATTGTT TCGAGTGTGCGAGGCGACGACGACGACATCCAACTGGTCCGGTACGAAGA AGTCCGCTTTCCTCGCTCATTAGCGGCGCTTTCCTCGGGCCCACGATCTG GAAGTCTGGAAATCGGCGATACCTAAAACCGGGCCATAGCCACCACTATC ATTATCAACAAATTGATATACATATGCAATTGCAGCAGCGCGTCATCAGC ACAGCGCCCATCGCCTAGCAGATCAGTAACAGGATCAAGAGCAAGGTAAC CGTCCAACACTACATGTCCTAAAACTAGGAACGGTTCTCCAGCCCAAGGA CTTATCGAGGACACTATCCAATCCCAGTCAATCATGCCGCTCTTCACAAG AAAATCACCCAAGCAAGGACCCACCTCGGATGGGGGCTCCCAGTTCGGCA GTCGCTCCTCCATGAACTCCGGGTCCTCCCAGGGCAGCCACATTAGCAAT AACAACAACAACAGCATTCCGGAGAAAACAAAGCCCCCGCTGGTCTTCCA CTGCCAACTGGCCCACGGCAGTCCCACCGGTCTAATCCACGACTTCTCCA GCGTTCGAGAGCTGTACCAGAAGATTGCCGAGTGCTTTGACATATCCGAG AAGGACATTCTCTTCTGCACCCTCAACTCGCACAAGGTGGACATGACGCG TCTGCTGGGCGGGCAGATCGGGCTGGACGACTTTATATTCGCCCATCGCA AAGGTCGGCCCAAGGAGATCGAGATTGTGAAGTCGCAGGATGCCCTCGGA CTGACGATCACCGACAACGGGGCCGGCTACGCCTTCATAAAGCGGATCAA GGAGGACTCGATCATCGATCGCATCGAGCACATCAGCGTTGGCGATCACA TCGAGAAGCTCAACGGCCAGAATATGGTGGGCAAGCGGCACTACGAGGTG GCGCGCATGCTGAAGGACATTGCCACCGGGGAGACCTTCACCCTGCGCCT GGTGGAGCCAGTGCGAAGCGGCTTCCAGGGCATCGGACCGCGCAGCCAGT CAAGGGCGTCGGGCTCGGCCGGAGGAAAGAACTATGGCAGCGGCAAGGAG ACGCTGCGGTTCAAGGCCAATGGCAATGCCCAGATCGAGCCGCAGTTCGA TGAGGCGACTGTGGCCGGTATCGAGGCCATTAATAACCTGCTGGAGTCCT TCATGGGCATCAACGACACGGAGCTGGCGTCCCAGATCTGGGACTTGGGC GACCAAAAGTCCAACTCAATGGACTTCGCCGAGGCCATCGACAACTCGGA CCTAGAGTCGTTCGGCTTCACGGATGACTTCATCATCGAGCTGTGGGGTG CCATAACGGATGCCCGGCGCAAGTCCACGACCAGTCCCAAGTAATTGGGT AACCATACCAGACGCTTTTCCAATAAATGAGGAGTGCTATTATCTACTAT TTGAGAACGTTTTGTTTTAGAGCCTAGTTTTATTTACCACATATCATGCT ACAATCCCATATACAAACATATGTCGTCTGCCTTTGCCAATTGTTTAGTT ATTTGTATTCTTCACGGTAACCTATTTATTATATATATATTTTTTGCGTT CAGATGAACGGGGGGATGTGCCGAGGCATCCCTACTATGCATATATTTTT GGTACAATTTGTTTGATGTACATACATACATACGTATAACTATACTTCTT TAGTTTTATCCTTTAAACGATACAAATATATTTAAATTATTTAAATCGGA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
kermit-RA | 2153 | kermit-RA | 153..2152 | 1..2000 | 10000 | 100 | Plus |
kermit-RC | 1742 | kermit-RC | 262..1741 | 521..2000 | 7400 | 100 | Plus |
kermit-RB | 1794 | kermit-RB | 315..1793 | 522..2000 | 7395 | 100 | Plus |
kermit-RB | 1794 | kermit-RB | 153..314 | 1..162 | 810 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\Kepler | 722 | Dbuz\Kepler KEPLER 722bp | 411..487 | 1922..1999 | 117 | 62.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 4034452..4035902 | 522..1972 | 98 | <- | Minus |
chr2R | 4043580..4044100 | 1..521 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
kermit-RD | 1..1011 | 634..1644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
kermit-RD | 1..1011 | 634..1644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
kermit-RD | 1..1011 | 634..1644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
kermit-RD | 1..1011 | 634..1644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
kermit-RD | 1..1011 | 634..1644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
kermit-RA | 76..2074 | 1..1999 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
kermit-RA | 47..2045 | 1..1999 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
kermit-RA | 80..2078 | 1..1999 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
kermit-RA | 76..2074 | 1..1999 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
kermit-RA | 80..2078 | 1..1999 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8146918..8148395 | 522..1999 | 100 | <- | Minus |
2R | 8156055..8156575 | 1..521 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8146918..8148395 | 522..1999 | 100 | <- | Minus |
2R | 8156055..8156575 | 1..521 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8146918..8148395 | 522..1999 | 100 | <- | Minus |
2R | 8156055..8156575 | 1..521 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 4034423..4035900 | 522..1999 | 100 | <- | Minus |
arm_2R | 4043560..4044080 | 1..521 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8148117..8149594 | 522..1999 | 100 | <- | Minus |
2R | 8157254..8157774 | 1..521 | 100 | Minus |
Translation from 633 to 1643
> LP09416.pep MPLFTRKSPKQGPTSDGGSQFGSRSSMNSGSSQGSHISNNNNNSIPEKTK PPLVFHCQLAHGSPTGLIHDFSSVRELYQKIAECFDISEKDILFCTLNSH KVDMTRLLGGQIGLDDFIFAHRKGRPKEIEIVKSQDALGLTITDNGAGYA FIKRIKEDSIIDRIEHISVGDHIEKLNGQNMVGKRHYEVARMLKDIATGE TFTLRLVEPVRSGFQGIGPRSQSRASGSAGGKNYGSGKETLRFKANGNAQ IEPQFDEATVAGIEAINNLLESFMGINDTELASQIWDLGDQKSNSMDFAE AIDNSDLESFGFTDDFIIELWGAITDARRKSTTSPK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11206-PA | 341 | GF11206-PA | 1..341 | 1..336 | 1592 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10670-PA | 340 | GG10670-PA | 1..340 | 1..336 | 1765 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19980-PA | 343 | GH19980-PA | 1..342 | 1..331 | 1355 | 79.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
kermit-PE | 336 | CG11546-PE | 1..336 | 1..336 | 1739 | 100 | Plus |
kermit-PC | 336 | CG11546-PC | 1..336 | 1..336 | 1739 | 100 | Plus |
kermit-PD | 336 | CG11546-PD | 1..336 | 1..336 | 1739 | 100 | Plus |
kermit-PB | 336 | CG11546-PB | 1..336 | 1..336 | 1739 | 100 | Plus |
kermit-PA | 336 | CG11546-PA | 1..336 | 1..336 | 1739 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20266-PA | 335 | GI20266-PA | 49..333 | 50..330 | 1398 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17375-PA | 343 | GL17375-PA | 1..343 | 1..336 | 1523 | 86.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11060-PA | 343 | GA11060-PA | 1..343 | 1..336 | 1523 | 86.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20716-PA | 336 | GM20716-PA | 1..336 | 1..336 | 1785 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20219-PA | 343 | GJ20219-PA | 1..339 | 1..333 | 1368 | 80.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23041-PA | 352 | GK23041-PA | 1..342 | 1..333 | 1476 | 82.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23259-PA | 336 | GE23259-PA | 1..336 | 1..336 | 1779 | 99.4 | Plus |
Translation from 633 to 1643
> LP09416.hyp MPLFTRKSPKQGPTSDGGSQFGSRSSMNSGSSQGSHISNNNNNSIPEKTK PPLVFHCQLAHGSPTGLIHDFSSVRELYQKIAECFDISEKDILFCTLNSH KVDMTRLLGGQIGLDDFIFAHRKGRPKEIEIVKSQDALGLTITDNGAGYA FIKRIKEDSIIDRIEHISVGDHIEKLNGQNMVGKRHYEVARMLKDIATGE TFTLRLVEPVRSGFQGIGPRSQSRASGSAGGKNYGSGKETLRFKANGNAQ IEPQFDEATVAGIEAINNLLESFMGINDTELASQIWDLGDQKSNSMDFAE AIDNSDLESFGFTDDFIIELWGAITDARRKSTTSPK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
kermit-PE | 336 | CG11546-PE | 1..336 | 1..336 | 1739 | 100 | Plus |
kermit-PC | 336 | CG11546-PC | 1..336 | 1..336 | 1739 | 100 | Plus |
kermit-PD | 336 | CG11546-PD | 1..336 | 1..336 | 1739 | 100 | Plus |
kermit-PB | 336 | CG11546-PB | 1..336 | 1..336 | 1739 | 100 | Plus |
kermit-PA | 336 | CG11546-PA | 1..336 | 1..336 | 1739 | 100 | Plus |