BDGP Sequence Production Resources |
Search the DGRC for LP09580
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 95 |
Well: | 80 |
Vector: | pOT2 |
Associated Gene/Transcript | Gal-RA |
Protein status: | LP09580.pep: gold |
Preliminary Size: | 2166 |
Sequenced Size: | 2328 |
Gene | Date | Evidence |
---|---|---|
CG9092 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9092 | 2002-05-18 | Blastp of sequenced clone |
CG9092 | 2003-01-01 | Sim4 clustering to Release 3 |
Gal | 2008-04-29 | Release 5.5 accounting |
Gal | 2008-08-15 | Release 5.9 accounting |
Gal | 2008-12-18 | 5.12 accounting |
2328 bp (2328 high quality bases) assembled on 2002-05-18
GenBank Submission: AY119076
> LP09580.complete ATTCTGGTCCACCCATCCGAGTGGAGCGAGCTTTCAAGCAAGCTTATATC GCTAGCGATACATTTGTGGTGTTTCTCCAAGCTCCCAAGTCGGCTCTTCA ATATGAGCGGTTGTCGTCGCAATCGAAAGCTGACGATGGCCGTAAGTGGA TGTCTGATAATTGCTGTGATGGCCCTCACCGTTGGGCTTTGTGTGGGACT GAGCGGTGACACCGACGCCCCCGAGGAACAGCCAAGGTTTACGATCGACC ATGAGGCCAACACCTTCATGCTGGATGGCCAGCCCTTCCGGTACGTCTCT GGATCGTTTCACTATTTCCGCGCTGTACCCGAGTCCTGGCGAAGTCGGTT GCGCACCATGCGAGCATCTGGTCTTAATGCTCTGGATACCTATGTTGAAT GGTCGCTCCACAATCCGCACGATGGAGAATACAACTGGGAGGGCATTGCG GATGTTGTCAAGTTTCTGGAGATTGCTCAGGAGGAAGACTTCTACATCAT TCTCCGCCCAGGTCCCTACATTTGTGCTGAGCGAGATAATGGTGGTCTTC CTCACTGGTTGTTTACCAAATACCCGTCCATCAAGATGCGGACCAATGAC CCCAACTACATCTCAGAGGTGGGCAAGTGGTATGCGGAGCTGATGCCACG CCTCCAGCACCTGTTCGTAGGCAACGGCGGCAAGATCATAATGGTGCAGG TGGAGAACGAGTACGGTGACTATGCCTGCGATCACGACTACCTCAACTGG CTGCGAGACGAGACGGAGAAGTATGTGTCCGGCAAGGCGCTGCTCTTCAC GGTGGACATACCCAACGAGAAGATGAGCTGTGGAAAGATCGAGAACGTGT TCGCCACCACTGACTTCGGCATCGATCGCATCAATGAGATTGACAAAATC TGGGCAATGCTGCGTGCCCTGCAGCCGACTGGCCCACTGGTCAACTCGGA GTTCTATCCCGGCTGGCTAACGCATTGGCAGGAGCAGAACCAAAGGCGTG ATGGCCAGGAGGTAGCCAATGCACTAAGGACAATTCTGAGCTACAACGCT AGTGTTAACCTCTATATGTTCTTTGGCGGCACAAACTTTGGGTTCACTGC TGGTGCCAACTATAATCTGGACGGTGGCATCGGATATGCGGCAGACATAA CCAGCTACGACTACGATGCAGTGATGGACGAGGCCGGTGGCGTCACCACT AAGTACAACCTTGTCAAGGCTGTGATTGGAGAATTCCTTCCGCTGCCGGA AATCACCTTGAATCCCGCTAAGCGTCTGGCCTACGGAAGGGTGGAGCTGA CACCCAAGCTGACACTGCTCTCGACGGAAGGACGTGCTGCGCTCTCCAAG GGTGATCCCGTCGAATCGATCAAGCCGAAAACCTTCGAGGAACTAGACTT GTACTCGGGCCTCGTCCTGTACGAGACCGAGCTGCCCAGCATGGATCTAG ACCCAGCCTTGCTGAAAATAGATCAAATTAACGATCGAGCACACGTATTC GTAGACCAGGAACTGGTGGGCACACTCTCCCGCGAGGCACAGATCTACTC GCTGCCGCTTAGCAAGGGTTGGGGCAGCACACTGCAGCTGCTGGTGGAGA ACCAAGGACGCGTCAACTTCTACATCTCCAACGACACGAAGGGCATCTTT GGTGAGGTGAGCCTGCAGCTGCACAATGGTGGTTACCTCCCGCTGGAGAA CTGGCGGAGCACCGCTTTCCCGCTGGAGCAATCCGCCGTCGAGCTCTGGC GGCGCGAACACACTGACGAGAAGGCCTTGGACCCGTTGCTGGCAAGGCAA CGCATTCTTCGAAACGGACCAATACTCTACACTGGCAGCCTGACAGTGAC GGAGGTGGGCGACACCTATTTGAACATGGCCGGTTGGGGCAAGGGCGTGG CCTATGTGAACGGTTTTAATTTGGGACGCTACTGGCCTGTGGCAGGTCCA CAGGTCACCTTATATGTGCCCAACGAGATACTGAAAGTGGGTGAAAACTC TCTGGTGATCCTTGAGTACCAACGAGCGAATAAGACAGCAACTGGCGAGG ATCTACCTGCAGTGCAGTTCGACGCAGTTGCTCAGCTGGACGGAGAGTCT GGTGATGTTCCACTTAAATGATGAGCCTTGTATGCATTGTTATTCCGTAT TTCTTTATTAGAAGCGTTTTTGATTGATACTTGTGTCAACAACCTTCGTT AAGCTTTATTATAAATTTTCTAACTCTTATAAATCTATGTTTATATACGC CTTAATAAATGCTGTTGATCTGTGCTTGACTGACTCTTATCGATCTCCAG CTTATTTTCAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 6002625..6003907 | 2309..1027 | 6415 | 100 | Minus |
chr2L | 23010047 | chr2L | 6004264..6004603 | 880..541 | 1700 | 100 | Minus |
chr2L | 23010047 | chr2L | 6005617..6005842 | 226..1 | 1130 | 100 | Minus |
chr2L | 23010047 | chr2L | 6004955..6005120 | 389..224 | 830 | 100 | Minus |
chr2L | 23010047 | chr2L | 6004736..6004887 | 541..390 | 760 | 100 | Minus |
chr2L | 23010047 | chr2L | 6004056..6004204 | 1029..881 | 745 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6003572..6004856 | 2311..1027 | 6425 | 100 | Minus |
2L | 23513712 | 2L | 6005213..6005552 | 880..541 | 1700 | 100 | Minus |
2L | 23513712 | 2L | 6006566..6006791 | 226..1 | 1130 | 100 | Minus |
2L | 23513712 | 2L | 6005904..6006069 | 389..224 | 830 | 100 | Minus |
2L | 23513712 | 2L | 6005685..6005836 | 541..390 | 760 | 100 | Minus |
2L | 23513712 | 2L | 6005005..6005153 | 1029..881 | 745 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6003572..6004856 | 2311..1027 | 6425 | 100 | Minus |
2L | 23513712 | 2L | 6005213..6005552 | 880..541 | 1700 | 100 | Minus |
2L | 23513712 | 2L | 6006566..6006791 | 226..1 | 1130 | 100 | Minus |
2L | 23513712 | 2L | 6005904..6006069 | 389..224 | 830 | 100 | Minus |
2L | 23513712 | 2L | 6005685..6005836 | 541..390 | 760 | 100 | Minus |
2L | 23513712 | 2L | 6005005..6005153 | 1029..881 | 745 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 6005618..6005842 | 1..225 | 100 | Minus | |
chr2L | 6002625..6003905 | 1029..2309 | 100 | <- | Minus |
chr2L | 6004057..6004204 | 881..1028 | 100 | <- | Minus |
chr2L | 6004264..6004603 | 541..880 | 100 | <- | Minus |
chr2L | 6004737..6004887 | 390..540 | 100 | <- | Minus |
chr2L | 6004955..6005118 | 226..389 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gal-RA | 1..2019 | 103..2121 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gal-RA | 1..2019 | 103..2121 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gal-RA | 1..2019 | 103..2121 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gal-RA | 1..2019 | 103..2121 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gal-RA | 1..2019 | 103..2121 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gal-RA | 1..2309 | 1..2309 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gal-RA | 1..2309 | 1..2309 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gal-RA | 37..2345 | 1..2309 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gal-RA | 1..2309 | 1..2309 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gal-RA | 37..2345 | 1..2309 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6005686..6005836 | 390..540 | 100 | <- | Minus |
2L | 6005904..6006067 | 226..389 | 100 | <- | Minus |
2L | 6006567..6006791 | 1..225 | 100 | Minus | |
2L | 6003574..6004854 | 1029..2309 | 100 | <- | Minus |
2L | 6005006..6005153 | 881..1028 | 100 | <- | Minus |
2L | 6005213..6005552 | 541..880 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6005686..6005836 | 390..540 | 100 | <- | Minus |
2L | 6005904..6006067 | 226..389 | 100 | <- | Minus |
2L | 6006567..6006791 | 1..225 | 100 | Minus | |
2L | 6003574..6004854 | 1029..2309 | 100 | <- | Minus |
2L | 6005006..6005153 | 881..1028 | 100 | <- | Minus |
2L | 6005213..6005552 | 541..880 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6005686..6005836 | 390..540 | 100 | <- | Minus |
2L | 6005904..6006067 | 226..389 | 100 | <- | Minus |
2L | 6006567..6006791 | 1..225 | 100 | Minus | |
2L | 6003574..6004854 | 1029..2309 | 100 | <- | Minus |
2L | 6005006..6005153 | 881..1028 | 100 | <- | Minus |
2L | 6005213..6005552 | 541..880 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 6005686..6005836 | 390..540 | 100 | <- | Minus |
arm_2L | 6005904..6006067 | 226..389 | 100 | <- | Minus |
arm_2L | 6006567..6006791 | 1..225 | 100 | Minus | |
arm_2L | 6003574..6004854 | 1029..2309 | 100 | <- | Minus |
arm_2L | 6005006..6005153 | 881..1028 | 100 | <- | Minus |
arm_2L | 6005213..6005552 | 541..880 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6005006..6005153 | 881..1028 | 100 | <- | Minus |
2L | 6005213..6005552 | 541..880 | 100 | <- | Minus |
2L | 6005686..6005836 | 390..540 | 100 | <- | Minus |
2L | 6005904..6006067 | 226..389 | 100 | <- | Minus |
2L | 6006567..6006791 | 1..225 | 100 | Minus | |
2L | 6003574..6004854 | 1029..2309 | 100 | <- | Minus |
Translation from 0 to 2120
> LP09580.hyp ILVHPSEWSELSSKLISLAIHLWCFSKLPSRLFNMSGCRRNRKLTMAVSG CLIIAVMALTVGLCVGLSGDTDAPEEQPRFTIDHEANTFMLDGQPFRYVS GSFHYFRAVPESWRSRLRTMRASGLNALDTYVEWSLHNPHDGEYNWEGIA DVVKFLEIAQEEDFYIILRPGPYICAERDNGGLPHWLFTKYPSIKMRTND PNYISEVGKWYAELMPRLQHLFVGNGGKIIMVQVENEYGDYACDHDYLNW LRDETEKYVSGKALLFTVDIPNEKMSCGKIENVFATTDFGIDRINEIDKI WAMLRALQPTGPLVNSEFYPGWLTHWQEQNQRRDGQEVANALRTILSYNA SVNLYMFFGGTNFGFTAGANYNLDGGIGYAADITSYDYDAVMDEAGGVTT KYNLVKAVIGEFLPLPEITLNPAKRLAYGRVELTPKLTLLSTEGRAALSK GDPVESIKPKTFEELDLYSGLVLYETELPSMDLDPALLKIDQINDRAHVF VDQELVGTLSREAQIYSLPLSKGWGSTLQLLVENQGRVNFYISNDTKGIF GEVSLQLHNGGYLPLENWRSTAFPLEQSAVELWRREHTDEKALDPLLARQ RILRNGPILYTGSLTVTEVGDTYLNMAGWGKGVAYVNGFNLGRYWPVAGP QVTLYVPNEILKVGENSLVILEYQRANKTATGEDLPAVQFDAVAQLDGES GDVPLK*
Translation from 102 to 2120
> LP09580.pep MSGCRRNRKLTMAVSGCLIIAVMALTVGLCVGLSGDTDAPEEQPRFTIDH EANTFMLDGQPFRYVSGSFHYFRAVPESWRSRLRTMRASGLNALDTYVEW SLHNPHDGEYNWEGIADVVKFLEIAQEEDFYIILRPGPYICAERDNGGLP HWLFTKYPSIKMRTNDPNYISEVGKWYAELMPRLQHLFVGNGGKIIMVQV ENEYGDYACDHDYLNWLRDETEKYVSGKALLFTVDIPNEKMSCGKIENVF ATTDFGIDRINEIDKIWAMLRALQPTGPLVNSEFYPGWLTHWQEQNQRRD GQEVANALRTILSYNASVNLYMFFGGTNFGFTAGANYNLDGGIGYAADIT SYDYDAVMDEAGGVTTKYNLVKAVIGEFLPLPEITLNPAKRLAYGRVELT PKLTLLSTEGRAALSKGDPVESIKPKTFEELDLYSGLVLYETELPSMDLD PALLKIDQINDRAHVFVDQELVGTLSREAQIYSLPLSKGWGSTLQLLVEN QGRVNFYISNDTKGIFGEVSLQLHNGGYLPLENWRSTAFPLEQSAVELWR REHTDEKALDPLLARQRILRNGPILYTGSLTVTEVGDTYLNMAGWGKGVA YVNGFNLGRYWPVAGPQVTLYVPNEILKVGENSLVILEYQRANKTATGED LPAVQFDAVAQLDGESGDVPLK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14288-PA | 661 | GF14288-PA | 1..661 | 12..672 | 3219 | 89.3 | Plus |
Dana\GF17225-PA | 637 | GF17225-PA | 24..618 | 46..642 | 1609 | 53 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24263-PA | 672 | GG24263-PA | 1..672 | 1..672 | 3422 | 95.7 | Plus |
Dere\GG18564-PA | 637 | GG18564-PA | 17..624 | 39..651 | 1644 | 52.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10713-PA | 680 | GH10713-PA | 11..680 | 3..672 | 2934 | 79.8 | Plus |
Dgri\GH23545-PA | 639 | GH23545-PA | 26..621 | 46..642 | 1588 | 53 | Plus |
Dgri\GH25263-PA | 619 | GH25263-PA | 26..601 | 46..642 | 1496 | 50.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gal-PA | 672 | CG9092-PA | 1..672 | 1..672 | 3561 | 100 | Plus |
Gal-PB | 670 | CG9092-PB | 1..670 | 1..672 | 3538 | 99.7 | Plus |
Ect3-PA | 637 | CG3132-PA | 1..617 | 23..641 | 1624 | 52 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11295-PA | 678 | GI11295-PA | 7..676 | 3..669 | 2897 | 79.1 | Plus |
Dmoj\GI23552-PA | 641 | GI23552-PA | 6..621 | 16..642 | 1620 | 51.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19091-PA | 672 | GL19091-PA | 3..672 | 4..672 | 3188 | 87.8 | Plus |
Dper\GL22259-PA | 640 | GL22259-PA | 4..621 | 16..642 | 1606 | 51.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25341-PA | 672 | GA25341-PA | 3..672 | 4..672 | 3202 | 87.9 | Plus |
Dpse\GA16177-PA | 640 | GA16177-PA | 4..621 | 16..642 | 1602 | 51.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17976-PA | 672 | GM17976-PA | 1..672 | 1..672 | 3541 | 98.1 | Plus |
Dsec\GM23992-PA | 622 | GM23992-PA | 24..609 | 46..651 | 1557 | 51.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18795-PA | 636 | GD18795-PA | 23..623 | 46..651 | 1638 | 53.2 | Plus |
Dsim\GD22612-PA | 69 | GD22612-PA | 1..69 | 1..69 | 357 | 92.8 | Plus |
Dsim\GD22613-PA | 81 | GD22613-PA | 1..62 | 86..147 | 334 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12525-PA | 684 | GJ12525-PA | 13..681 | 5..668 | 2907 | 80 | Plus |
Dvir\GJ23531-PA | 640 | GJ23531-PA | 7..621 | 19..642 | 1569 | 51.1 | Plus |