BDGP Sequence Production Resources |
Search the DGRC for LP09747
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 97 |
Well: | 47 |
Vector: | pOT2 |
Associated Gene/Transcript | CG44247-RA |
Protein status: | LP09747.pep: gold |
Sequenced Size: | 3605 |
Gene | Date | Evidence |
---|---|---|
Atf-2-RB | 2009-06-22 | Replacement based on scoring |
3605 bp assembled on 2009-11-02
GenBank Submission: BT100206.1
> LP09747.complete AGCAACGCAGCCCAGGAGTCGAGTCCCATCCGCATATATCCCCACAGCCA TATGTCCATCTGAGCTTCTTCGCCAGCAATCTGTGAGAAAAGTGCACCAT TTGACATTTTAACCACCCGGTAGAGTGCAGCATAACCTTTGCTAGGACAC CTAATAACCCCCAAAAATCCTCGAGAAGTGCAGTTGGCGCAGGTTACTAG CCAGAAATATTGCACGCCCACGCGAAAGTGCAAAAGTTCGGGGAGCAACC ACCAGCAGCTGCCAATTGGATATATTCGCAAGTGTGTGCGAGTGTGGGTG TTGAAAATCAATAACCCTCGTCGACGTCGTCGTTCTAGCCAAAGCCCCAT TAACCGGCCATATGGCAGTGGTGGCAGAGGTCGTGCAGTGCTAGATAGTT CCCATTCGAAATTGATTTCTGAGGTCTCGAGAAATCCGCAAGTGGGAGTG CATTTGGTGGCAAGTGCAAGATGGCGGCTCGCCTGGAAATCACCGTTAGC TTGGCGCTCGCTGCAACGCTACTGTGCAGCATATTGGGTCATTGCGAAAT GTCCGTTTACCCAGGATTGCGCCGCCGACCCATTCAGCCGCCTGTGATGG ATCCGCAGAGTGAGCAAGAGTATGCTTTTCTGGCCCAGATGATGGAGCAG TATGCCCGCCGTCGGCTGCAGCAGCAGTTCGACCAACAGCTGCACGAAAT CAACCTGAAGATGGATCGTCAGCGGCAGCTCTTGGAGCAGGAGCGGTACC GCCAGCGGCAGCAGGAGCTCCAGGTACAGCGCGAGGCGGAGGAGGACTAC GAGTCCAACGGAAACAACCTGAACCAGCAGTACGACCAGTACGACAACGC GGAGGCAGAGGCCAGCTACGGCAGTCCGATGGAGGCAGTCTCTGATCTCC AAAGTCCTCCATTGTACCTGCCTCGCCTGCCCAACCTACCACCCTTGCCC AGCCTTCCGAATCGGCCCAGCCTGGGCAACTCCCCGAACAGGAACAGTGT GCTCCGCGAACGGATTCCCTTTGCTGTAGGTCCCAGCGACGCTCGCTTCT TTGACAACCCGAACGACCCTTCGGGGGAGCTGGATTCCCGGGCGCTGGAG GACTACGAGGAGTATGCTCCCATTGAGCCCACAACCGAAGTAGCCACCAC CGCCAGTAAGACCAAGATCGATACGCCAGTACCGGCTCCCGTGCCCGTTG AGCCGCCCAAACTGCTTGACGCCGCCAACACCAACTTCCACCGCATCAAT CCCCAGTCCGCCGCCGCCGCAGCCGTGGCGGGAGTGAATATTCCCCAGAG CAAAGAACAACCACCCCATGAACTTAACGCACTGATCAACAAGCTGCAAA AGCAAAGCAAAGCGCCCTCTCATTTGACGCTGGTCAACGGAGGTGATTCC AGTCAGGAGCAGATTGTGCTGCGCCAGCACCTGGGCATGAACAGCGAGAT GGGGGTGTACATAGTGGCCCTAATAGCGGGGGTTAGTGCAGCGGTGACCG TTGGGCTTCTTGCCCTCGGAGTAACTTGGTTCCATAATCGACACAAGGCA GCAGCGGACGTGGAATACCCTGCCTACGGCGTTACCGGGCCGAACAAGGA TGTCTCGCCGTCCGGTGACAGAAAGCTGGCCCAGAGCGCCCAAATGTACC ACTACCAGCACCAGAAGCAGCAGATCATCGCCATGGAGAACCAGGCCACG GATGGTAGCTGCGGCATGTCGGACGTGGAGAGCGACGACGACAACGAGGA GGGCGACTACACGGTGTACGAGTGCCCCGGCCTGGCGCCCACTGGTGAGA TGGAGGTGAAGAATCCGCTCTTCCTGGACGAGACGCCGGCCACGCCGTCA AACAACCTGTCGTCCCAAACCGCTGGAGCTGCCAATGCGGCAGCAGCGAC CAATAACAACATCACGCAGGCTACCCCCCAGCAGCCGGCCACCCTGAAGA AGGGAACGGTCAAGCCGAACATAAATCTCCTGAACGCAACGGGCACTGCA GCAGCAGCAGCTTCAGCCGCATCAGCAGCCTCAGCGACCGGAGGGGAGGA GCCCAAGCAGAAGCGCAAGAGCAAGAAGTAAGGCGACTGGACATTGTTTT CCCTCTTGGGGCAATTGGTAAAGTTTGACTGATCCATTGTCAGCCAACAG ACACATCCTCTTACACAGATTCAAAAACAGACCAGACTAGGTGCTGGGAG CCATCTACGCATATTACAGATACTTCAGGGAATTTAATTCCGGGAGCCAA GCAAACCACACACACGACACTACACACATCTGTCACTATTCTTCCTTCCC TATATATGCATAAGTCCGGTAATGTAATGTAATTGCTATGCAGTAAGAAT AGCTCCAGTAAACCGTGAGTACCCCAAACCCGAACCCAATCCCAATCCCA ATCTCATCCGCCCAGTTTCCACCCGCTGTCAGTTGCACAACGCTGATGAT TCTATTACGATGCGGCAAGCGTAATCCTGTGTTGCATGGCAGCGTGGGTT ATTGTATATCAACTTTTTTTGTCACTGCGAATCGTTGGATTTACGGTCTG GAGAAGCTGAGGAGCTTAGGAGGAGGGACAACCAACCGAAGCAAACTAAC ATATTATATTATTATAAATATATGTATACATACACACATATTTATATATA GATATATATTCATGTAATTATTGTATTATATACACGAAGGCGGACACCTT TTTACTTACCTGTCTGTGTGGTGTACTATCTTCTCTCATTTTTACTACGC TTTGTGATCGATCCTAAATTATCTGTGTCAATTTAGAAATACAATTCCGG CATCCAAACTTTTTGCATGCGCATGCAAATATATTTCGTAGAGCAGGAGA CGCGACTAGAGGAGGAGAGGATTATTTACAAGTAAAACTTAACAATAATT TCCCTGCACATTCATGTAAAGTAAATGAAAAACGACTGATAACACACAAA AAGAACACGCGTCTATTGTACAAAAAAGAGAAATCGATACGAAGAAACAA TTTATTTACCTATTAGTGAGAGATTATTAATGGAAACTATCAGCGGAAAC AATTCCCAGCCCCAAAAACTACTAAAGGAAACTGTAGCGAACATTTTACT GTATTGCTGTAAATAATCATGAAACATTGGGCAAAGGACAGAGTTAGAAA CCATTGCGGCCGAAACAATACACTGAATACAACCGAATTGAAGAACTTGC GAGTTCAAAAACTAGCTAAAGAAAACACAACACGAATATTATATTTCTAT TAACTAGGCGAATGCAAAGCATCTTGGAGCATTGAACATTGAATTTGAAT TCCAAATCGAAACTGACTTAGCCACAATAAAATGCGCATAGCATATGAAT GTACGTTGAGCGTAATGTTGAGTTTGAAATATATATTTTATGGTGTTTGG CCAAAAACACGAAAATAATTAGAACTCAAGGCGAGGACTCGAAATGCAAA ATTGCAACTTGAAAGCGGAGGTGCAAAGAACACACTTTGTAAATGAAGAG CATAATTTAATTTATATTTATTCATGTATGATAACCGTAAAACACACAAA TTATACAATATGCATACAGAATAAACTAAACTAACCAAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Atf-2.b | 3867 | Atf-2.b | 170..3759 | 1..3590 | 17950 | 100 | Plus |
Atf-2-RB | 2871 | Atf-2-RB | 170..2871 | 1..2702 | 13510 | 100 | Plus |
Atf-2.a | 2565 | Atf-2.a | 245..2565 | 339..2659 | 11605 | 100 | Plus |
Atf-2.a | 2565 | Atf-2.a | 109..244 | 146..281 | 680 | 100 | Plus |
Atf-2.a | 2565 | Atf-2.a | 27..109 | 1..83 | 415 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 20765122..20767174 | 1528..3586 | 10140 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 20764095..20765063 | 562..1530 | 4830 | 99.9 | Plus |
chr2R | 21145070 | chr2R | 20762693..20763257 | 1..565 | 2825 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 24879163..24881225 | 1528..3590 | 10315 | 100 | Plus |
2R | 25286936 | 2R | 24878136..24879104 | 562..1530 | 4845 | 100 | Plus |
2R | 25286936 | 2R | 24876734..24877298 | 1..565 | 2825 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 24880362..24882424 | 1528..3590 | 10315 | 100 | Plus |
2R | 25260384 | 2R | 24879335..24880303 | 562..1530 | 4845 | 100 | Plus |
2R | 25260384 | 2R | 24877933..24878497 | 1..565 | 2825 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
roo | 9092 | roo DM_ROO 9092bp | 1046..1119 | 1641..1716 | 130 | 70.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 20762693..20763256 | 1..564 | 100 | -> | Plus |
chr2R | 20764098..20765061 | 565..1528 | 99 | -> | Plus |
chr2R | 20765123..20767174 | 1529..3586 | 94 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Atf-2-RB | 1..1611 | 471..2081 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Atf-2-RB | 1..1611 | 471..2081 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG44247-RA | 1..1611 | 471..2081 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG44247-RA | 1..1611 | 471..2081 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Atf-2-RB | 27..2685 | 1..2659 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Atf-2-RB | 27..2685 | 1..2659 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG44247-RB | 44..3629 | 1..3586 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG44247-RB | 44..3629 | 1..3586 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24876734..24877297 | 1..564 | 100 | -> | Plus |
2R | 24878139..24879102 | 565..1528 | 100 | -> | Plus |
2R | 24879164..24881221 | 1529..3586 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24876734..24877297 | 1..564 | 100 | -> | Plus |
2R | 24878139..24879102 | 565..1528 | 100 | -> | Plus |
2R | 24879164..24881221 | 1529..3586 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24876734..24877297 | 1..564 | 100 | -> | Plus |
2R | 24878139..24879102 | 565..1528 | 100 | -> | Plus |
2R | 24879164..24881221 | 1529..3586 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 20764257..20764820 | 1..564 | 100 | -> | Plus |
arm_2R | 20765662..20766625 | 565..1528 | 100 | -> | Plus |
arm_2R | 20766687..20768744 | 1529..3586 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24877951..24878514 | 1..564 | 100 | -> | Plus |
2R | 24879356..24880319 | 565..1528 | 100 | -> | Plus |
2R | 24880381..24882438 | 1529..3586 | 100 | Plus |
Translation from 470 to 2080
> LP09747.pep MAARLEITVSLALAATLLCSILGHCEMSVYPGLRRRPIQPPVMDPQSEQE YAFLAQMMEQYARRRLQQQFDQQLHEINLKMDRQRQLLEQERYRQRQQEL QVQREAEEDYESNGNNLNQQYDQYDNAEAEASYGSPMEAVSDLQSPPLYL PRLPNLPPLPSLPNRPSLGNSPNRNSVLRERIPFAVGPSDARFFDNPNDP SGELDSRALEDYEEYAPIEPTTEVATTASKTKIDTPVPAPVPVEPPKLLD AANTNFHRINPQSAAAAAVAGVNIPQSKEQPPHELNALINKLQKQSKAPS HLTLVNGGDSSQEQIVLRQHLGMNSEMGVYIVALIAGVSAAVTVGLLALG VTWFHNRHKAAADVEYPAYGVTGPNKDVSPSGDRKLAQSAQMYHYQHQKQ QIIAMENQATDGSCGMSDVESDDDNEEGDYTVYECPGLAPTGEMEVKNPL FLDETPATPSNNLSSQTAGAANAAAATNNNITQATPQQPATLKKGTVKPN INLLNATGTAAAAASAASAASATGGEEPKQKRKSKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13346-PA | 536 | GF13346-PA | 1..535 | 1..536 | 2043 | 84.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23014-PA | 542 | GG23014-PA | 1..542 | 1..536 | 2759 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20365-PA | 531 | GH20365-PA | 1..531 | 1..536 | 1609 | 66.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG44247-PB | 536 | CG44247-PB | 1..536 | 1..536 | 2759 | 100 | Plus |
CG44247-PA | 536 | CG44247-PA | 1..536 | 1..536 | 2759 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20038-PA | 510 | GI20038-PA | 1..482 | 1..504 | 1499 | 69.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11194-PA | 523 | GL11194-PA | 1..523 | 1..536 | 2130 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24636-PA | 527 | GA24636-PA | 1..527 | 1..536 | 2131 | 81.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11908-PA | 274 | GM11908-PA | 1..274 | 1..274 | 1384 | 95.6 | Plus |
Dsec\GM11909-PA | 199 | GM11909-PA | 1..199 | 327..536 | 947 | 92.9 | Plus |
Dsec\GM18751-PA | 185 | GM18751-PA | 1..162 | 1..162 | 832 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11906-PA | 536 | GD11906-PA | 1..536 | 1..536 | 2806 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21282-PA | 531 | GJ21282-PA | 1..531 | 1..536 | 1489 | 67.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21678-PA | 516 | GK21678-PA | 16..516 | 20..536 | 1902 | 73.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14451-PA | 537 | GE14451-PA | 1..537 | 1..536 | 2755 | 96.5 | Plus |
Translation from 470 to 2080
> LP09747.hyp MAARLEITVSLALAATLLCSILGHCEMSVYPGLRRRPIQPPVMDPQSEQE YAFLAQMMEQYARRRLQQQFDQQLHEINLKMDRQRQLLEQERYRQRQQEL QVQREAEEDYESNGNNLNQQYDQYDNAEAEASYGSPMEAVSDLQSPPLYL PRLPNLPPLPSLPNRPSLGNSPNRNSVLRERIPFAVGPSDARFFDNPNDP SGELDSRALEDYEEYAPIEPTTEVATTASKTKIDTPVPAPVPVEPPKLLD AANTNFHRINPQSAAAAAVAGVNIPQSKEQPPHELNALINKLQKQSKAPS HLTLVNGGDSSQEQIVLRQHLGMNSEMGVYIVALIAGVSAAVTVGLLALG VTWFHNRHKAAADVEYPAYGVTGPNKDVSPSGDRKLAQSAQMYHYQHQKQ QIIAMENQATDGSCGMSDVESDDDNEEGDYTVYECPGLAPTGEMEVKNPL FLDETPATPSNNLSSQTAGAANAAAATNNNITQATPQQPATLKKGTVKPN INLLNATGTAAAAASAASAASATGGEEPKQKRKSKK*