BDGP Sequence Production Resources |
Search the DGRC for LP09874
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 98 |
Well: | 74 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4741-RA |
Protein status: | LP09874.pep: gold |
Preliminary Size: | 705 |
Sequenced Size: | 849 |
Gene | Date | Evidence |
---|---|---|
CG4741 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4741 | 2002-05-18 | Blastp of sequenced clone |
CG4741 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4741 | 2008-04-29 | Release 5.5 accounting |
CG4741 | 2008-08-15 | Release 5.9 accounting |
CG4741 | 2008-12-18 | 5.12 accounting |
849 bp (849 high quality bases) assembled on 2002-05-18
GenBank Submission: AY119080
> LP09874.complete TCGGCTCTGTCTGTTCGTCAGAGAACTGCTGTCTTCGAGACATTTTTCAG TTCCAATCAGGAATTAACACCCGAGTTCAACATGGCCCCTGCCATAAACG CGACGGTCAGCACCCCTTTTGACTCCACCACGGTGGCCAACGGAACACTT AACACCACTGAAAGTACGACATCGGATTGGGAATACGTTAACACCACTTC CGTCACAATTTGGATCAACGGTGGCGGCTACGATGGTCCATACATGTTAT TTTATCCCAGCTATGTCATTTACATTGTGCTGGTCTTCCTCTTCGTCATC GCCTTTCCTCTGGCCATGATTATGAGCGCCAAACGCAAGCGAGAGACCAA TGTGCGGAATCTGGCCCAGCAGAGACAACGAGCCCGTCGCCAAATGGAGA TCAATGTGACGAACAATTGCAACGGCGGCTCCGGAGGAGTCGGAAACGTG TGCTCAAACAGCCAGAACGAAGTTAGTGTCCTGCCCAAGACCTTGGATTT GCCGCCCAGCTACGACGAGGCCGCTTTTAGCGAGCGAAAGCAGGACAGCA CACTGACCATAGCCACCAGCTTGGAAGCGAGCAATCCCAATTTGGCGGTT GGAATTAACGAACCACCGCCGGTTTACGAGGCGAACGTGGCCACAACCAC CACTTCCACCACCACCACCGTATTTTTGGTCAACGGCCAACCACCAGTGG TGTAACAAAGCATTGGACTTCTGAGAAATAGTAAATCTATTATTATTTAT ACACTAAACAAGACACTGTACAGCTTTGCCTTTGTAAATAAATCTTGCTC CTCGGCAACTCTTTAATTTTGCATAACTTATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 20496711..20497161 | 831..381 | 2225 | 99.6 | Minus |
chr2R | 21145070 | chr2R | 20499913..20500236 | 324..1 | 1620 | 100 | Minus |
chr2R | 21145070 | chr2R | 20499794..20499852 | 382..324 | 295 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 24610831..24611284 | 834..381 | 2270 | 100 | Minus |
2R | 25286936 | 2R | 24614033..24614356 | 324..1 | 1620 | 100 | Minus |
2R | 25286936 | 2R | 24613914..24613972 | 382..324 | 295 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 24612030..24612483 | 834..381 | 2270 | 100 | Minus |
2R | 25260384 | 2R | 24615232..24615555 | 324..1 | 1620 | 100 | Minus |
2R | 25260384 | 2R | 24615113..24615171 | 382..324 | 295 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 20499913..20500236 | 1..324 | 100 | Minus | |
chr2R | 20496711..20497159 | 383..831 | 99 | <- | Minus |
chr2R | 20499794..20499851 | 325..382 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4741-RA | 1..624 | 82..705 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4741-RA | 1..624 | 82..705 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4741-RA | 1..624 | 82..705 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4741-RA | 1..624 | 82..705 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4741-RA | 1..624 | 82..705 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4741-RA | 1..831 | 1..831 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4741-RA | 1..831 | 1..831 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4741-RA | 18..848 | 1..831 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4741-RA | 1..831 | 1..831 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4741-RA | 18..848 | 1..831 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24610834..24611282 | 383..831 | 100 | <- | Minus |
2R | 24613914..24613971 | 325..382 | 100 | <- | Minus |
2R | 24614033..24614356 | 1..324 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24610834..24611282 | 383..831 | 100 | <- | Minus |
2R | 24613914..24613971 | 325..382 | 100 | <- | Minus |
2R | 24614033..24614356 | 1..324 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24610834..24611282 | 383..831 | 100 | <- | Minus |
2R | 24613914..24613971 | 325..382 | 100 | <- | Minus |
2R | 24614033..24614356 | 1..324 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 20498357..20498805 | 383..831 | 100 | <- | Minus |
arm_2R | 20501437..20501494 | 325..382 | 100 | <- | Minus |
arm_2R | 20501556..20501879 | 1..324 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24615250..24615573 | 1..324 | 100 | Minus | |
2R | 24612051..24612499 | 383..831 | 100 | <- | Minus |
2R | 24615131..24615188 | 325..382 | 100 | <- | Minus |
Translation from 0 to 704
> LP09874.hyp SALSVRQRTAVFETFFSSNQELTPEFNMAPAINATVSTPFDSTTVANGTL NTTESTTSDWEYVNTTSVTIWINGGGYDGPYMLFYPSYVIYIVLVFLFVI AFPLAMIMSAKRKRETNVRNLAQQRQRARRQMEINVTNNCNGGSGGVGNV CSNSQNEVSVLPKTLDLPPSYDEAAFSERKQDSTLTIATSLEASNPNLAV GINEPPPVYEANVATTTTSTTTTVFLVNGQPPVV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4741-PA | 207 | CG4741-PA | 1..207 | 28..234 | 1066 | 100 | Plus |
CG4741-PB | 148 | CG4741-PB | 6..148 | 89..234 | 569 | 78.8 | Plus |
CG4741-PC | 103 | CG4741-PC | 1..103 | 132..234 | 530 | 100 | Plus |
Translation from 81 to 704
> LP09874.pep MAPAINATVSTPFDSTTVANGTLNTTESTTSDWEYVNTTSVTIWINGGGY DGPYMLFYPSYVIYIVLVFLFVIAFPLAMIMSAKRKRETNVRNLAQQRQR ARRQMEINVTNNCNGGSGGVGNVCSNSQNEVSVLPKTLDLPPSYDEAAFS ERKQDSTLTIATSLEASNPNLAVGINEPPPVYEANVATTTTSTTTTVFLV NGQPPVV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11920-PA | 215 | GF11920-PA | 1..215 | 1..207 | 550 | 63.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19910-PA | 208 | GG19910-PA | 1..208 | 1..207 | 798 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21576-PA | 143 | GH21576-PA | 5..117 | 85..183 | 261 | 54 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4741-PA | 207 | CG4741-PA | 1..207 | 1..207 | 1066 | 100 | Plus |
CG4741-PB | 148 | CG4741-PB | 6..148 | 62..207 | 569 | 78.8 | Plus |
CG4741-PC | 103 | CG4741-PC | 1..103 | 105..207 | 530 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19548-PA | 217 | GI19548-PA | 59..193 | 57..186 | 283 | 51.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10104-PA | 210 | GL10104-PA | 1..210 | 1..207 | 429 | 57.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18396-PA | 210 | GA18396-PA | 1..210 | 1..207 | 410 | 55 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11811-PA | 207 | GM11811-PA | 1..207 | 1..207 | 811 | 93.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24935-PA | 206 | GD24935-PA | 1..206 | 1..207 | 805 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21120-PA | 221 | GJ21120-PA | 56..194 | 54..186 | 340 | 50.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21879-PA | 215 | GK21879-PA | 1..196 | 1..183 | 384 | 50.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11433-PA | 264 | GE11433-PA | 58..264 | 1..207 | 844 | 88.9 | Plus |