BDGP Sequence Production Resources |
Search the DGRC for LP10272
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 102 |
Well: | 72 |
Vector: | pOT2 |
Associated Gene/Transcript | Tmhs-RA |
Protein status: | LP10272.pep: gold |
Preliminary Size: | 1511 |
Sequenced Size: | 1471 |
Gene | Date | Evidence |
---|---|---|
CG12026 | 2001-01-01 | Release 2 assignment |
CG12026 | 2001-07-04 | Blastp of sequenced clone |
CG12026 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12026 | 2008-04-29 | Release 5.5 accounting |
CG12026 | 2008-08-15 | Release 5.9 accounting |
CG12026 | 2008-12-18 | 5.12 accounting |
1471 bp (1471 high quality bases) assembled on 2001-07-04
GenBank Submission: AY052063
> LP10272.complete ACACATGCAGATGGATGGAAAGTTATCATTTGCCAAATACTCGGTCACCT CTTGCATCAGAGTTCCCTGACTCAAAAGCATTACTCTATCGCCACGAGGT CATCAAACCGAAAGCTGGCCAATTTAATAGGATTAAGTAAAGAGCGCCCC AAAACCGATTTATGACCAGCAGAAACGCAATTGTTCGGGTTGCCCTGATT GCGTTGGTTCCATCTTTCAATTATTAACCAGCAGACAAAGCAGCATTCCC CACTCTCTAAAAAATGGGAACGAAGATCGAGTACGTGGACACCACGCACC TGTACGCCTCCAAGTACATCCGCAACTCCAAGGCGATCGGTGTGCTGTGG GCCATCTTCACCATTTGCTATGCCATCATCGGCATCGTGGCATTCGTGAC ACCAGAGTGGATCGGTGATCCGGACAACGATGGAGCTGGTCGCCTGGGCC TCTGGCAGCAGTGCCAGCGGGACGAGATCTTCGACAACTGCCGTCGACGA TGGGAGAGCATCTTCGAAGTGCCCACATTCTCGTTTCAGTTGGCCACATT CTTTATGCTGGGCGCCATAGCACTGGCCTTGCTGACCATATTCTTCTTGG TTTGTTTGCTGTTTATGAAGTCGACGCGTGTTTTCCACCTTTGCGGTTGG ATGCAAATCATATCAGCTATTTGCATGATTGTGGCCTGCGCGGCGTTTCC CTTTGGCTGGAATTCGGACGATTTCCGTAAGATCTGTGGACCGGAAGCGA ATCGCTTCGAGCTGGGCTTGTGCGGCATCCGCTGGGCTTATCCACTGGCC ATAATCGGTTGCATAGATGGCGTGGTCTTGGCCACTCTGGCGTTTATCTT GGCCACGCGGCACGTGCGCCTGCAGCCAGATCCGATATACCAGAACTCGC TATACAAAGGTGAAATCAACAATGCTTACCTCACAGATGCCATCAGCTTG GCGGGCTCGAGGAAATCCAACCCACGCATAACTGGCTTGAATTTGCAGCC CATTTTGCTGGTGGCTCCGCCAAACGAGGATAGCATATCGCAGTTTTCTC GTTATCACTGAGCACACCATTCAAACAGCCAGGACGCCAACCAATTAAGC TTAGCACGTGCAAGAACCAGGGGTGAAACTCAGCTTAAAGTTTTCCATAA ATCGTTCAAACGATTTTTAACCGATTTTCGCCGCAACCATAAGATGAAAC TATGAAAATGTGTGTGGTATGTGTATTTGAGTGTGAAAGTCAGCGAGTGA ATGATTTGTATATGCCGCTTAGCCCGACTGAATGCCAACTTGTAGTTGTA AGATTGGATTTTAAACTATAATTTAACATTTCGTGTGAATAGCTTGTGCC TAAGTGTATGCTTCGAATAAGTTAAAAGTTAAAAGAGAGTTCCCGAAGCT CTGCCTGTAAATTATATACCCATAAACAATAAACATGTACAAATATTAAA CATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 1890479..1891024 | 908..1453 | 2730 | 100 | Plus |
chr3L | 24539361 | chr3L | 1890174..1890422 | 664..912 | 1245 | 100 | Plus |
chr3L | 24539361 | chr3L | 1889052..1889284 | 1..233 | 1165 | 100 | Plus |
chr3L | 24539361 | chr3L | 1889336..1889510 | 231..405 | 875 | 100 | Plus |
chr3L | 24539361 | chr3L | 1889577..1889714 | 402..539 | 690 | 100 | Plus |
chr3L | 24539361 | chr3L | 1889879..1890014 | 535..670 | 665 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 1890917..1891466 | 908..1457 | 2750 | 100 | Plus |
3L | 28110227 | 3L | 1890612..1890860 | 664..912 | 1245 | 100 | Plus |
3L | 28110227 | 3L | 1889490..1889722 | 1..233 | 1165 | 100 | Plus |
3L | 28110227 | 3L | 1889774..1889948 | 231..405 | 875 | 100 | Plus |
3L | 28110227 | 3L | 1890015..1890152 | 402..539 | 690 | 100 | Plus |
3L | 28110227 | 3L | 1890317..1890452 | 535..670 | 665 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 1890917..1891466 | 908..1457 | 2750 | 100 | Plus |
3L | 28103327 | 3L | 1890612..1890860 | 664..912 | 1245 | 100 | Plus |
3L | 28103327 | 3L | 1889490..1889722 | 1..233 | 1165 | 100 | Plus |
3L | 28103327 | 3L | 1889774..1889948 | 231..405 | 875 | 100 | Plus |
3L | 28103327 | 3L | 1890015..1890152 | 402..539 | 690 | 100 | Plus |
3L | 28103327 | 3L | 1890317..1890452 | 535..670 | 665 | 99.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 1889052..1889285 | 1..234 | 99 | -> | Plus |
chr3L | 1889340..1889510 | 235..405 | 100 | -> | Plus |
chr3L | 1889581..1889714 | 406..539 | 100 | -> | Plus |
chr3L | 1889884..1890010 | 540..666 | 100 | -> | Plus |
chr3L | 1890177..1890419 | 667..909 | 100 | -> | Plus |
chr3L | 1890481..1891024 | 910..1453 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12026-RA | 1..798 | 264..1061 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12026-RA | 1..798 | 264..1061 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tmhs-RB | 1..798 | 264..1061 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12026-RA | 1..798 | 264..1061 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tmhs-RB | 1..798 | 264..1061 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12026-RA | 1..1453 | 1..1453 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12026-RA | 1..1453 | 1..1453 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tmhs-RA | 1..1453 | 1..1453 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12026-RA | 1..1453 | 1..1453 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tmhs-RA | 1..1453 | 1..1453 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1890615..1890857 | 667..909 | 100 | -> | Plus |
3L | 1889490..1889723 | 1..234 | 99 | -> | Plus |
3L | 1889778..1889948 | 235..405 | 100 | -> | Plus |
3L | 1890019..1890152 | 406..539 | 100 | -> | Plus |
3L | 1890322..1890448 | 540..666 | 100 | -> | Plus |
3L | 1890919..1891462 | 910..1453 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1890615..1890857 | 667..909 | 100 | -> | Plus |
3L | 1889490..1889723 | 1..234 | 99 | -> | Plus |
3L | 1889778..1889948 | 235..405 | 100 | -> | Plus |
3L | 1890019..1890152 | 406..539 | 100 | -> | Plus |
3L | 1890322..1890448 | 540..666 | 100 | -> | Plus |
3L | 1890919..1891462 | 910..1453 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1890615..1890857 | 667..909 | 100 | -> | Plus |
3L | 1889490..1889723 | 1..234 | 99 | -> | Plus |
3L | 1889778..1889948 | 235..405 | 100 | -> | Plus |
3L | 1890019..1890152 | 406..539 | 100 | -> | Plus |
3L | 1890322..1890448 | 540..666 | 100 | -> | Plus |
3L | 1890919..1891462 | 910..1453 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 1889490..1889723 | 1..234 | 99 | -> | Plus |
arm_3L | 1889778..1889948 | 235..405 | 100 | -> | Plus |
arm_3L | 1890019..1890152 | 406..539 | 100 | -> | Plus |
arm_3L | 1890322..1890448 | 540..666 | 100 | -> | Plus |
arm_3L | 1890615..1890857 | 667..909 | 100 | -> | Plus |
arm_3L | 1890919..1891462 | 910..1453 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1889490..1889723 | 1..234 | 99 | -> | Plus |
3L | 1889778..1889948 | 235..405 | 100 | -> | Plus |
3L | 1890019..1890152 | 406..539 | 100 | -> | Plus |
3L | 1890322..1890448 | 540..666 | 100 | -> | Plus |
3L | 1890615..1890857 | 667..909 | 100 | -> | Plus |
3L | 1890919..1891462 | 910..1453 | 100 | Plus |
Translation from 263 to 1060
> LP10272.pep MGTKIEYVDTTHLYASKYIRNSKAIGVLWAIFTICYAIIGIVAFVTPEWI GDPDNDGAGRLGLWQQCQRDEIFDNCRRRWESIFEVPTFSFQLATFFMLG AIALALLTIFFLVCLLFMKSTRVFHLCGWMQIISAICMIVACAAFPFGWN SDDFRKICGPEANRFELGLCGIRWAYPLAIIGCIDGVVLATLAFILATRH VRLQPDPIYQNSLYKGEINNAYLTDAISLAGSRKSNPRITGLNLQPILLV APPNEDSISQFSRYH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24845-PA | 265 | GF24845-PA | 1..265 | 1..265 | 1398 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14834-PA | 265 | GG14834-PA | 1..265 | 1..265 | 1407 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16164-PA | 265 | GH16164-PA | 1..265 | 1..265 | 1362 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tmhs-PA | 265 | CG12026-PA | 1..265 | 1..265 | 1414 | 100 | Plus |
Tmhs-PB | 265 | CG12026-PB | 1..265 | 1..265 | 1414 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13317-PA | 265 | GI13317-PA | 1..265 | 1..265 | 1362 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25316-PA | 265 | GL25316-PA | 1..265 | 1..265 | 1343 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11348-PA | 265 | GA11348-PA | 1..265 | 1..265 | 1369 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14457-PA | 265 | GM14457-PA | 1..265 | 1..265 | 1406 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13656-PA | 265 | GD13656-PA | 1..265 | 1..265 | 1406 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12087-PA | 265 | GJ12087-PA | 1..265 | 1..265 | 1362 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20164-PA | 265 | GK20164-PA | 1..265 | 1..265 | 1365 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21197-PA | 265 | GE21197-PA | 1..265 | 1..265 | 1404 | 99.2 | Plus |
Translation from 263 to 1060
> LP10272.hyp MGTKIEYVDTTHLYASKYIRNSKAIGVLWAIFTICYAIIGIVAFVTPEWI GDPDNDGAGRLGLWQQCQRDEIFDNCRRRWESIFEVPTFSFQLATFFMLG AIALALLTIFFLVCLLFMKSTRVFHLCGWMQIISAICMIVACAAFPFGWN SDDFRKICGPEANRFELGLCGIRWAYPLAIIGCIDGVVLATLAFILATRH VRLQPDPIYQNSLYKGEINNAYLTDAISLAGSRKSNPRITGLNLQPILLV APPNEDSISQFSRYH*