BDGP Sequence Production Resources |
Search the DGRC for LP10412
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 104 |
Well: | 12 |
Vector: | pOT2 |
Associated Gene/Transcript | Axs-RB |
Protein status: | LP10412.pep: wuzgold |
Preliminary Size: | 2396 |
Sequenced Size: | 2931 |
Gene | Date | Evidence |
---|---|---|
CG9703 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9703 | 2002-05-30 | Blastp of sequenced clone |
Axs | 2008-04-29 | Release 5.5 accounting |
Axs | 2008-08-15 | Release 5.9 accounting |
Axs | 2008-12-18 | 5.12 accounting |
2931 bp (2931 high quality bases) assembled on 2002-05-30
GenBank Submission: AY118348.1
> LP10412.complete GGAAAGAAGAGGAGATTCTAGTTAATTTAAACAAATTAAAACCAAATTAA TTGTGACATATATGATTTATTTTTGTAGTTGTTGCTGTTGTTGTGACAGA GAGGCGAATCGTTTCGATAACATGGCAGCGATGACGTCACGCGCCACGCA GCTGGGACAGCAACAAAAACAATTGGATTTGAACCGGCAAGAACTGAATA TTTTGGCATTATTATTAAAAATTCAGTATTTTGGCATTGGCGCGGGCCAA GATACACTCATACACGCAATTAGCACACACACGCACACCGCAAGTGCGAG CGAGATAGCAAGCACTTACTCATGCGAGCGGAGAAGAAAAGCAAAAACAA AATAAACGAAACTGAGAGAATTCTGCAATATCATATTCGGATGTGGATGT GATTGTTATATTTTGTTATTAGTTCAGCGACGCCACTCGTCGTCACCCGT AAACGATGTCCGAAGATGCCAAGAGTCCAGGACCACGCACACGGAACATC ATCGAGAATCAGCTGTTCCGCCGGCAGCGTAGCCTAAAATTGGAGGCACT GCAGCGCCAGCGGACCTTGGATTCCAACGATGGGGTGGAGGGATTGGGCG CAGATACGGAACCCTTCGACAAGACGCACATCGTCATCATCTTTACGGAG AAGGCCAAGCTAAGACACTGTCAGGATGTGGAGAAGATCATTCAGGAGTT TGGCATCCAGACCACGCTGGAGATCGTAGGGAAAACCGAAAAGTATCTCT ACCTATCGGCCAGCGTGGATACTCTGCTCCGTTTGGCCGATGCCGCCGAG CTGGAGAAGATGACCACCACGCACAGCATGCAAAAGTTCAATCACGGCTG CATCTCGGACTTTCTACTGCCCGGGATGGGCAAAGAGCAGATCCTGCGCT ACTGCGAGATACCTGTTCTCATCAAGGACGTAATCCAGGACGGCATTAAG TCCTACGTGCAAAAGGGCTACATAGAGGATATGTTTCCCCTCCACGATAT CCTGTATCTCGAACGCTTCAACTGGAACCTGAAACGCACCAAGCTGCCCA TCGAGGACATCCGGAACTACTTTGGTTCCAGTATAGGTCTTTATTTCGGC TTCATCGAGTTCTACACGAAGGCACTGATCTTTCCCTCCCTTTTTGGTAT ACTCCAATATGTATTCGATCTGAACATCTCGCTGGTCTGCAGTTTCTACG TTGTTTGGACCACGGTGAGTTAAATTGTTAATTTTCAAGGCGAAACAAAG TAAACCTTTGCACAATAAAAATAAATTGCTTTTACAGCTTATAAATCTAA GTATAGCATCACTTAAGTGCTCTTAAGTTGGAAACTTTTAAGTGCTATAG TAAAAATAGCTAGCATGTATGTATTTTGATCTTGCAGTTTTACCAATTTT CAAGTTTGAATAGTTTAAATATATCTATACACCGACTAAATCATTGCCAC AAAAAACAGTTAACTAAAGATTAAATACACTAGAGCTGGCATAAAACGTT ATGGTTTTGGTCTTCCAATCGATTTTATATTAACATATTCCTATATTTTT AGATTTTCCTGGAGTTGTGGAAGCGTAAGTGTGCCGGCTACTCGTATCGA TGGGGCACCATTGAGATGAGCAGCCTGGACAAGCCGCGATCCGCATATAC GGGCCAATTGAAACCGGACCCCATCACCGGCAAGATGACACTCCACTATC CGATGCGGTACACATACCTGCAGATGTACTGCATCTCGTATCCGGTGGTG CTGGGCTGTGTGGTTGCCGCCGGCTGGTTTGCCCTCTACCAGTTTCAGAT CGAAGCCGAGGTGCTGGCGGATTTCGGACCAGACTCCTGGCTGCTGTACG TGCCGGTTATTGTGCAGTCGGTGCTGATTGCGATCTTTTCGTGGGCATAC GAAAAGCTGGCCACATTCCTCACCAACCTGGAGAACCATCGAACTCGATC GCAGTACGATCGTCATCGGGTCAATAAGCTGATGCTCTTCGAGATCGTGA ATAACTTCTTCTCGCAGTTCTATATTGCCTTCGTGCTGCACGATCTGCGC CAGCTGAAGTACCAGTTGATGATGCAACTGCTGGTCTTCCAGCTGCTGTG CATCGCCCAGGAGATTGGTATACCGCTGCTGGCGGTGCTGCGCCAGAAGT ACGCCGAGTTCCGTCATCGCGAGGTGGCCGAGGAGAAGCTGCGATCCATC AGTGATCTGCCGCGCTACGAGCAATCGTTCTACGAATCCGGACTAGATGA ATATCATTCCACGTACGAGGACTACCTGCAGGTATGCATCCAGTTTGGAT TCGTGGTCCTGTTTGCCGCCGTTGCCCCATTTGCCGCCATTGGAGCTCTG CTGAACAACGTCTTTGCGGTGCACATTGATATGTGGAAGCTGTGCAACAT CTTTAAGCGACCATTTGCAAGGCGCGCCAAGAACATCGGCGCCTGGCAGC TGGCCTTCGAGCTGCTCTCAGTGATGTCGTTGCTTAGCAACTGCGGTCTG CTCTTCCTTCAGCCGAATGTCAAGGACTTCTTCTCTCACTGGCTGCCATC GGTGCCGGATCTTTCGTTCGTAATCTTCGAACACTTGCTGCTGGGCCTGA AGTTTCTCATCCACAAGGTTATTCACGAAAGGCCGCGCTGGGTGCGCATC GGACTGCTAAAGGCGGACTTCGAGACCAGCCAGGCTCTCAAGCAACTCAA AAAATTCAAGGCGGAGGCCAACAAGATGGCCTGATGGGCCACAAGATCGC CGGATCTCCCACTCCACTCCTTTTGGTGCTAATGAAACCAGTCCATTTTA AATGTTATTATTTATAAACATACGACTAATCGCGTTTACCGCGAATGTTC GAGACCAACGGAAGTAAGGTGCCTTAAACCTAAAACTCATATAAATATGT CCACAGAGTACTTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Axs-RB | 2939 | Axs-RB | 1..2915 | 1..2915 | 14575 | 100 | Plus |
Axs-RA | 2644 | Axs-RA | 1257..2620 | 1552..2915 | 6820 | 100 | Plus |
Axs-RA | 2644 | Axs-RA | 44..1257 | 1..1214 | 6070 | 100 | Plus |
sing-RA | 898 | sing-RA | 800..898 | 2915..2817 | 495 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 16570280..16571802 | 2524..1002 | 7555 | 99.7 | Minus |
chrX | 22417052 | chrX | 16573100..16573575 | 476..1 | 2365 | 99.8 | Minus |
chrX | 22417052 | chrX | 16571881..16572152 | 1001..730 | 1360 | 100 | Minus |
chrX | 22417052 | chrX | 16569771..16569981 | 2913..2701 | 985 | 98.6 | Minus |
chrX | 22417052 | chrX | 16570044..16570224 | 2700..2520 | 860 | 98.3 | Minus |
chrX | 22417052 | chrX | 16572889..16573037 | 623..475 | 745 | 100 | Minus |
chrX | 22417052 | chrX | 16572706..16572815 | 731..622 | 535 | 99.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 16680600..16682122 | 2524..1002 | 7615 | 100 | Minus |
X | 23542271 | X | 16683420..16683895 | 476..1 | 2380 | 100 | Minus |
X | 23542271 | X | 16682201..16682472 | 1001..730 | 1360 | 100 | Minus |
X | 23542271 | X | 16680087..16680301 | 2915..2701 | 1075 | 100 | Minus |
X | 23542271 | X | 16680364..16680544 | 2700..2520 | 890 | 99.4 | Minus |
X | 23542271 | X | 16683209..16683357 | 623..475 | 745 | 100 | Minus |
X | 23542271 | X | 16683026..16683135 | 731..622 | 550 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 16688698..16690220 | 2524..1002 | 7615 | 100 | Minus |
X | 23527363 | X | 16691518..16691993 | 476..1 | 2380 | 100 | Minus |
X | 23527363 | X | 16690299..16690570 | 1001..730 | 1360 | 100 | Minus |
X | 23527363 | X | 16688185..16688399 | 2915..2701 | 1075 | 100 | Minus |
X | 23527363 | X | 16688462..16688642 | 2700..2520 | 890 | 99.4 | Minus |
X | 23527363 | X | 16691307..16691455 | 623..475 | 745 | 100 | Minus |
X | 23527363 | X | 16691124..16691233 | 731..622 | 550 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
S2 | 1735 | S2 S2 1735bp | 10..62 | 1248..1300 | 139 | 73.6 | Plus |
S2 | 1735 | S2 S2 1735bp | 1670..1726 | 1305..1248 | 125 | 70.7 | Minus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3270..3347 | 2519..2444 | 123 | 67.1 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 16569771..16569981 | 2701..2913 | 98 | <- | Minus |
chrX | 16570044..16570220 | 2524..2700 | 98 | <- | Minus |
chrX | 16570281..16571802 | 1002..2523 | 99 | <- | Minus |
chrX | 16571881..16572151 | 731..1001 | 100 | <- | Minus |
chrX | 16572707..16572813 | 624..730 | 99 | <- | Minus |
chrX | 16572889..16573037 | 475..623 | 100 | <- | Minus |
chrX | 16573102..16573575 | 1..474 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Axs-RA | 1..758 | 456..1213 | 100 | == | Plus |
Axs-RA | 759..1941 | 1552..2734 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Axs-RA | 1..758 | 456..1213 | 100 | == | Plus |
Axs-RA | 759..1941 | 1552..2734 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Axs-RA | 1..758 | 456..1213 | 100 | == | Plus |
Axs-RA | 759..1941 | 1552..2734 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Axs-RA | 1..758 | 456..1213 | 100 | == | Plus |
Axs-RA | 759..1941 | 1552..2734 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Axs-RA | 1..758 | 456..1213 | 100 | == | Plus |
Axs-RA | 759..1941 | 1552..2734 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Axs-RB | 1..2911 | 1..2911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Axs-RB | 1..2911 | 1..2911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Axs-RA | 1..1213 | 1..1213 | 100 | == | Plus |
Axs-RA | 1214..2575 | 1552..2913 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Axs-RB | 1..2911 | 1..2911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Axs-RA | 1..1213 | 1..1213 | 100 | == | Plus |
Axs-RA | 1214..2575 | 1552..2913 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16680089..16680301 | 2701..2913 | 100 | <- | Minus |
X | 16680364..16680540 | 2524..2700 | 100 | <- | Minus |
X | 16680601..16682122 | 1002..2523 | 100 | <- | Minus |
X | 16682201..16682471 | 731..1001 | 100 | <- | Minus |
X | 16683027..16683133 | 624..730 | 100 | <- | Minus |
X | 16683209..16683357 | 475..623 | 100 | <- | Minus |
X | 16683422..16683895 | 1..474 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16680089..16680301 | 2701..2913 | 100 | <- | Minus |
X | 16680364..16680540 | 2524..2700 | 100 | <- | Minus |
X | 16680601..16682122 | 1002..2523 | 100 | <- | Minus |
X | 16682201..16682471 | 731..1001 | 100 | <- | Minus |
X | 16683027..16683133 | 624..730 | 100 | <- | Minus |
X | 16683209..16683357 | 475..623 | 100 | <- | Minus |
X | 16683422..16683895 | 1..474 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16680089..16680301 | 2701..2913 | 100 | <- | Minus |
X | 16680364..16680540 | 2524..2700 | 100 | <- | Minus |
X | 16680601..16682122 | 1002..2523 | 100 | <- | Minus |
X | 16682201..16682471 | 731..1001 | 100 | <- | Minus |
X | 16683027..16683133 | 624..730 | 100 | <- | Minus |
X | 16683209..16683357 | 475..623 | 100 | <- | Minus |
X | 16683422..16683895 | 1..474 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 16577455..16577928 | 1..474 | 100 | Minus | |
arm_X | 16574122..16574334 | 2701..2913 | 100 | <- | Minus |
arm_X | 16574397..16574573 | 2524..2700 | 100 | <- | Minus |
arm_X | 16574634..16576155 | 1002..2523 | 100 | <- | Minus |
arm_X | 16576234..16576504 | 731..1001 | 100 | <- | Minus |
arm_X | 16577060..16577166 | 624..730 | 100 | <- | Minus |
arm_X | 16577242..16577390 | 475..623 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16688187..16688399 | 2701..2913 | 100 | <- | Minus |
X | 16688462..16688638 | 2524..2700 | 100 | <- | Minus |
X | 16688699..16690220 | 1002..2523 | 100 | <- | Minus |
X | 16690299..16690569 | 731..1001 | 100 | <- | Minus |
X | 16691125..16691231 | 624..730 | 100 | <- | Minus |
X | 16691307..16691455 | 475..623 | 100 | <- | Minus |
X | 16691520..16691993 | 1..474 | 100 | Minus |
Translation from 455 to 1222
> LP10412.pep MSEDAKSPGPRTRNIIENQLFRRQRSLKLEALQRQRTLDSNDGVEGLGAD TEPFDKTHIVIIFTEKAKLRHCQDVEKIIQEFGIQTTLEIVGKTEKYLYL SASVDTLLRLADAAELEKMTTTHSMQKFNHGCISDFLLPGMGKEQILRYC EIPVLIKDVIQDGIKSYVQKGYIEDMFPLHDILYLERFNWNLKRTKLPIE DIRNYFGSSIGLYFGFIEFYTKALIFPSLFGILQYVFDLNISLVCSFYVV WTTVS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21728-PA | 646 | GF21728-PA | 1..254 | 1..254 | 1221 | 89 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18235-PA | 646 | GG18235-PA | 1..254 | 1..254 | 1334 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11928-PA | 630 | GH11928-PA | 1..251 | 1..254 | 1058 | 79.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Axs-PA | 646 | CG9703-PA | 1..254 | 1..254 | 1315 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15349-PA | 643 | GI15349-PA | 1..252 | 1..254 | 1074 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12944-PA | 644 | GL12944-PA | 1..250 | 1..254 | 1176 | 86.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21976-PA | 644 | GA21976-PA | 1..250 | 1..254 | 1168 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13377-PA | 646 | GM13377-PA | 1..254 | 1..254 | 1356 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15734-PA | 646 | GD15734-PA | 1..254 | 1..254 | 1356 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19453-PA | 642 | GJ19453-PA | 1..251 | 1..254 | 1083 | 81.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19948-PA | 651 | GK19948-PA | 1..259 | 1..254 | 1109 | 79.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15653-PA | 646 | GE15653-PA | 1..254 | 1..254 | 1328 | 97.6 | Plus |
Translation from 1615 to 2733
> LP10412.hyp MSSLDKPRSAYTGQLKPDPITGKMTLHYPMRYTYLQMYCISYPVVLGCVV AAGWFALYQFQIEAEVLADFGPDSWLLYVPVIVQSVLIAIFSWAYEKLAT FLTNLENHRTRSQYDRHRVNKLMLFEIVNNFFSQFYIAFVLHDLRQLKYQ LMMQLLVFQLLCIAQEIGIPLLAVLRQKYAEFRHREVAEEKLRSISDLPR YEQSFYESGLDEYHSTYEDYLQVCIQFGFVVLFAAVAPFAAIGALLNNVF AVHIDMWKLCNIFKRPFARRAKNIGAWQLAFELLSVMSLLSNCGLLFLQP NVKDFFSHWLPSVPDLSFVIFEHLLLGLKFLIHKVIHERPRWVRIGLLKA DFETSQALKQLKKFKAEANKMA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Axs-PA | 646 | CG9703-PA | 275..646 | 1..372 | 1940 | 100 | Plus |
CG15270-PB | 1259 | CG15270-PB | 376..758 | 4..351 | 434 | 30.2 | Plus |
CG15270-PE | 1292 | CG15270-PE | 376..758 | 4..351 | 434 | 30.2 | Plus |
CG15270-PF | 1305 | CG15270-PF | 376..758 | 4..351 | 434 | 30.2 | Plus |
CG15270-PA | 1338 | CG15270-PA | 376..758 | 4..351 | 434 | 30.2 | Plus |