BDGP Sequence Production Resources |
Search the DGRC for LP10445
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 104 |
Well: | 45 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8300-RA |
Protein status: | LP10445.pep: gold |
Preliminary Size: | 1148 |
Sequenced Size: | 1063 |
Gene | Date | Evidence |
---|---|---|
CG8300 | 2001-01-01 | Release 2 assignment |
CG8300 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8300 | 2003-03-19 | Blastp of sequenced clone |
CG8300 | 2008-04-29 | Release 5.5 accounting |
CG8300 | 2008-08-15 | Release 5.9 accounting |
CG8300 | 2008-12-18 | 5.12 accounting |
1063 bp (1063 high quality bases) assembled on 2003-03-19
GenBank Submission: AY069749
> LP10445.complete TTTGCACCTAACTGCGCCAAGCGCCCCATGGCACGCGATTCTCGCCGTTT GTGAGTCGTTTCGCCGGTGGCCCCCAACCCAAGGACATTTTGGCCCCCAG CCGGCCGTATACGCATTTGGCGTTGACCCGCGTCCGCTTTTTTCATGACC AAAACGGCGGCTGCGATTCAAACGAAGCTCAAGCGCAAGCAAAAACATTC GCGCAGCGTCAATCAATCGAGGCGGTACTTAATCGGGTTTAGAGCTATCC ATAGCCATGTCAGCGGAGAGGAACAAGAGTGGCGAAGTACGCAGTGCAGC TGGAGGATTGGAACTGGCATCTGCGAGTGGAGCAAGTGCATCCGAGACGG ACAATGTGAGCGCCCTTGAACTGCAGTCCAACAAGCGCATGCTGTACTTT AGCGACGGCGTCATGGAGGAGTTGTCCTCGGGCAGCGAGGACGAGGCGGA TGCGGAAATGGGCGACAAATGCTACGACGTCCATTTAAACGAGAGCGAAA TGCCGCTGGGACCACGCCTGCGTTACAAGGCCAGCAGGATGGGCAACCGA TTCCTGGCCGGCATCGACTATGTGGGCGGTGGGCTGGCCCACCTGCTTGG TATCACCAGCAGCAAGTATGCCAGCGAATTGGAGAACTACCACAGGGCCA AGGAGCACGGCGACGAGGACCTTGACAATTGGCACCCGCGGGCCATGTCG ACCACGACCAGTAGCAGCAACAACAACAGCAGCGGCAACAACAATCGCAA CGAAACCATCGTCCTATGCGAACCAACACGCAGCGAGGCGACCTTGCCAC CCACACGGCAGTAGGCGCCCACTGGGCCACCCACTTGCCAGGTGGGTTGT GCAAGGTGGCGATTTTCTTGGCAGGAAGGCGAAACAAAATGCTCATGGAG TACTGGCGACACTTGGAGACTCTTTTACTTGGTAAAAACCATGCGAAACG AAATGAATCAAAACAGATATTAACTTTTCGACACTTTATTCGCTAGCAAA TAAGTTATACATATACATATATGATAATAAAAAAAATACACATATAAAAA AAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2449..2562 | 701..811 | 175 | 64 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2682..2914 | 590..813 | 169 | 57.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2524..2682 | 602..760 | 166 | 60.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6727..6881 | 600..760 | 158 | 60.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1056..1107 | 698..749 | 152 | 76.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6768..6883 | 701..814 | 150 | 63.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1540..1605 | 713..778 | 150 | 69.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6732..6815 | 701..784 | 149 | 67.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2417 | 707..814 | 147 | 64 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1104..1163 | 701..760 | 147 | 71.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6819..6881 | 701..763 | 144 | 69.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2318..2395 | 699..778 | 143 | 67.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6750..6830 | 701..780 | 141 | 65.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2264..2452 | 599..778 | 139 | 57.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6729..6772 | 701..744 | 139 | 79.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2788..2838 | 707..757 | 138 | 74.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6796 | 713..786 | 135 | 68 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1549..1612 | 701..760 | 130 | 71.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6751 | 712..744 | 129 | 87.9 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1110..1178 | 710..778 | 129 | 65.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2577..2626 | 695..743 | 121 | 74 | Plus |
TART-A | 13424 | TART-A 13424bp | 897..942 | 697..741 | 119 | 76.1 | Plus |
TART-A | 13424 | TART-A 13424bp | 12075..12120 | 697..741 | 119 | 76.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1518..1591 | 715..792 | 118 | 68.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2438..2475 | 714..751 | 118 | 78.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1546..1599 | 701..754 | 117 | 68.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 5649..5720 | 718..792 | 114 | 68.4 | Plus |
Doc3-element | 4740 | Doc3-element DOC3 4740bp | 529..580 | 716..769 | 112 | 70.4 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 979..1011 | 701..733 | 111 | 81.8 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 1173..1246 | 962..1039 | 111 | 62.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6769..6920 | 600..751 | 110 | 55.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 6996891..6997383 | 1..493 | 100 | -> | Plus |
chrX | 6997784..6998318 | 494..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8300-RA | 1..558 | 257..814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8300-RA | 1..558 | 257..814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8300-RA | 1..558 | 257..814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8300-RA | 1..558 | 257..814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8300-RA | 1..558 | 257..814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8300-RA | 1..1028 | 1..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8300-RA | 1..1028 | 1..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8300-RA | 16..1043 | 1..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8300-RA | 1..1028 | 1..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8300-RA | 16..1043 | 1..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7104900..7105392 | 1..493 | 100 | -> | Plus |
X | 7105794..7106328 | 494..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7104900..7105392 | 1..493 | 100 | -> | Plus |
X | 7105794..7106328 | 494..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7104900..7105392 | 1..493 | 100 | -> | Plus |
X | 7105794..7106328 | 494..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 6998933..6999425 | 1..493 | 100 | -> | Plus |
arm_X | 6999827..7000361 | 494..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7112998..7113490 | 1..493 | 100 | -> | Plus |
X | 7113892..7114426 | 494..1028 | 100 | Plus |
Translation from 256 to 813
> LP10445.hyp MSAERNKSGEVRSAAGGLELASASGASASETDNVSALELQSNKRMLYFSD GVMEELSSGSEDEADAEMGDKCYDVHLNESEMPLGPRLRYKASRMGNRFL AGIDYVGGGLAHLLGITSSKYASELENYHRAKEHGDEDLDNWHPRAMSTT TSSSNNNSSGNNNRNETIVLCEPTRSEATLPPTRQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8300-PA | 185 | CG8300-PA | 1..185 | 1..185 | 952 | 100 | Plus |
Translation from 256 to 813
> LP10445.pep MSAERNKSGEVRSAAGGLELASASGASASETDNVSALELQSNKRMLYFSD GVMEELSSGSEDEADAEMGDKCYDVHLNESEMPLGPRLRYKASRMGNRFL AGIDYVGGGLAHLLGITSSKYASELENYHRAKEHGDEDLDNWHPRAMSTT TSSSNNNSSGNNNRNETIVLCEPTRSEATLPPTRQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21344-PA | 181 | GF21344-PA | 16..181 | 19..185 | 509 | 66.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19634-PA | 181 | GG19634-PA | 1..181 | 1..185 | 748 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24652-PA | 172 | GH24652-PA | 9..172 | 30..185 | 411 | 55.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8300-PA | 185 | CG8300-PA | 1..185 | 1..185 | 952 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11080-PA | 174 | GI11080-PA | 17..174 | 29..185 | 403 | 57.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14687-PA | 175 | GL14687-PA | 9..159 | 20..177 | 510 | 68.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20968-PA | 183 | GA20968-PA | 1..171 | 18..181 | 477 | 64 | Plus |
Dpse\GA23719-PA | 1010 | GA23719-PA | 1..148 | 18..157 | 444 | 64.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17507-PA | 176 | GM17507-PA | 1..176 | 1..185 | 690 | 84.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16834-PA | 176 | GD16834-PA | 1..176 | 1..185 | 867 | 91.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16391-PA | 166 | GJ16391-PA | 19..165 | 30..184 | 414 | 58.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25121-PA | 178 | GK25121-PA | 14..138 | 20..140 | 351 | 63.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15703-PA | 185 | GE15703-PA | 23..185 | 19..185 | 729 | 86.2 | Plus |