BDGP Sequence Production Resources |
Search the DGRC for LP10490
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 104 |
Well: | 90 |
Vector: | pOT2 |
Associated Gene/Transcript | Vap-33B-RA |
Protein status: | LP10490.pep: gold |
Preliminary Size: | 1312 |
Sequenced Size: | 1526 |
Gene | Date | Evidence |
---|---|---|
CG10977 | 2002-01-01 | Sim4 clustering to Release 2 |
CG33523 | 2003-08-02 | Blastp of sequenced clone |
CG33523 | 2008-04-29 | Release 5.5 accounting |
CG33523 | 2008-08-15 | Release 5.9 accounting |
CG33523 | 2008-12-18 | 5.12 accounting |
1526 bp (1526 high quality bases) assembled on 2003-08-02
GenBank Submission: BT010032
> LP10490.complete CGAACTAGTCACAAAAACCTGCAAAGCAATCGCATTTTACGTTTGTTTCT GTCCTCAACTTGTCGTAATCGTCATGGAAATGTGCAATCTGTAATTGTTA TTAACAAAGGAGCAAACATAAGTGGAAACTGCATTGTTATCGTACCAATT GATATTCACTACTCAAAGTTTAAGCAAAAACAACAAAATGCCCAGGGTCA CCTTTGTCGATTCCGCTCCCATGGTGCTCAAGGAGACCAACATCAACAAG ATGCACACTCCATCCGAGGGCATGTTGCACATCAATCCCAAGGATTTTGT CAACTTCAATTCCAAGAATGCGGAAGCCACGATGACCATCAAGTCTATTG CCACCTCGGCAGTGACGTACAAGATCCAAACCACATCGCCGGAGAAGTTC CGTGTGCGACCACGTTGCGGCATCATCCAGCCCAATCAGGAGGCCACCAT CAACATATGGTTGAAGTCGGAGCACAAGCTTAGTGACGACAGCAAGGATA AGTTCCTGGTGATGGCTATGGTCGCGCCAGGCGGTGAATGCGGTGGCGCC GATGTGACCGAGCTGTGGCGGAGCAAATCCCCCACATCTGCGGATGTGGA GCAGCATCGACTGGTCTGCCGCTTCGATGAGAACAAATCAAAAGCGCAGC TAGATTGCGCAAGCAAGTCCAGTAAGGCCAGCGTGGATTGCAGCAAGAAG TCCGGTGCTGGCGTAGATCCAGCTACGGCAATGGAGCGTCAGTTGGCATT CACCCAGAACCTGCAATACGTGACGCTGGCGCTGTTGTTCCTGTTGTTTG CCGGCTTCGGCTTTCTGATGTACCAGCAGCTCGGCCAGCACGCCGCTACC TGTCCCAAGGCAACGGCGTATTCGTGCGCTAAGCGCAAATAATATTTACT TAGCCCGTGCAATTTGACCAGGCAGGAGCTAGACATTGCCGCTCGCGATA GCCACAACAATAACGAAGACGACTGCGACTGTCCAGAGCTGGAGAACTGT GCCTGTGCTGTTGATTTGATGAATCTAGGTCTGGACTGTGCCGATACGAT GGACCAATACGATGGCGAATGCCTCGAGGCACTGATACAGGCGCATCTGC AGCTGTGCCTCAGCTGTCAGGGCACTGGTGATTGGCAGCTGGGCGGCGTT GCTGCCGGCGGCCATTTGCTGGGATTCATCGCATTCGCAAGGAAGATGGT GCGCGTCGTTCTTTCGCTATCGCTGCTGTGCGGCATCTTGTTCGTGAGCT TCTACCTGGGAAGCAACTACGGCGGAAACTCCACCACCACTACCATAACC ACCTCCCTAGCCACAGTCGACTCAGGCAGAGGCAATCGTCAGCCGTGTTA CTACTCGTAGTGAAGCCAAAACCCTCAACTGTGCATGCCAGGGTGGTTCG ATTTGTTCAGCAGTAAATGCAACTTGTTCACCTCTGTACACGTAATAATC CATTTTGACCCTTGCCAGGTATGAAAACTACAAATATTAAAGCCTTCTTA CATACTTCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33523-RA | 2150 | CG33523-RA | 161..1670 | 1..1510 | 7550 | 100 | Plus |
CG33523.g | 2671 | CG33523.g | 1002..2316 | 196..1510 | 6575 | 100 | Plus |
CG33523.e | 1709 | CG33523.e | 216..1459 | 267..1510 | 6220 | 100 | Plus |
CG33523.e | 1709 | CG33523.e | 23..219 | 1..197 | 985 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 5921700..5922498 | 710..1508 | 3890 | 99.1 | Plus |
chr3L | 24539361 | chr3L | 5921298..5921636 | 372..710 | 1680 | 99.7 | Plus |
chr3L | 24539361 | chr3L | 5919467..5919664 | 1..198 | 960 | 99 | Plus |
chr3L | 24539361 | chr3L | 5921132..5921236 | 269..373 | 525 | 100 | Plus |
chr3L | 24539361 | chr3L | 5920819..5920893 | 196..270 | 375 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 5929104..5929904 | 710..1510 | 4005 | 100 | Plus |
3L | 28110227 | 3L | 5928702..5929040 | 372..710 | 1695 | 100 | Plus |
3L | 28110227 | 3L | 5926871..5927068 | 1..198 | 990 | 100 | Plus |
3L | 28110227 | 3L | 5928536..5928640 | 269..373 | 525 | 100 | Plus |
3L | 28110227 | 3L | 5928223..5928297 | 196..270 | 375 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 5922204..5923004 | 710..1510 | 4005 | 100 | Plus |
3L | 28103327 | 3L | 5921802..5922140 | 372..710 | 1695 | 100 | Plus |
3L | 28103327 | 3L | 5919971..5920168 | 1..198 | 990 | 100 | Plus |
3L | 28103327 | 3L | 5921636..5921740 | 269..373 | 525 | 100 | Plus |
3L | 28103327 | 3L | 5921323..5921397 | 196..270 | 375 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 5919467..5919662 | 1..196 | 98 | -> | Plus |
chr3L | 5920820..5920892 | 197..269 | 100 | -> | Plus |
chr3L | 5921133..5921236 | 270..373 | 100 | -> | Plus |
chr3L | 5921300..5921635 | 374..709 | 99 | -> | Plus |
chr3L | 5921700..5922498 | 710..1508 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33523-RA | 1..705 | 188..892 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33523-RA | 1..705 | 188..892 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33523-RF | 801..1965 | 196..1360 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33523-RA | 1..705 | 188..892 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vap-33B-RF | 801..1965 | 196..1360 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33523-RA | 1..1508 | 1..1508 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33523-RA | 1..1508 | 1..1508 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33523-RA | 1..1508 | 1..1508 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33523-RA | 1..1508 | 1..1508 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vap-33B-RA | 1..1508 | 1..1508 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5926871..5927066 | 1..196 | 100 | -> | Plus |
3L | 5928224..5928296 | 197..269 | 100 | -> | Plus |
3L | 5928537..5928640 | 270..373 | 100 | -> | Plus |
3L | 5928704..5929039 | 374..709 | 100 | -> | Plus |
3L | 5929104..5929902 | 710..1508 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5926871..5927066 | 1..196 | 100 | -> | Plus |
3L | 5928224..5928296 | 197..269 | 100 | -> | Plus |
3L | 5928537..5928640 | 270..373 | 100 | -> | Plus |
3L | 5928704..5929039 | 374..709 | 100 | -> | Plus |
3L | 5929104..5929902 | 710..1508 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5926871..5927066 | 1..196 | 100 | -> | Plus |
3L | 5928224..5928296 | 197..269 | 100 | -> | Plus |
3L | 5928537..5928640 | 270..373 | 100 | -> | Plus |
3L | 5928704..5929039 | 374..709 | 100 | -> | Plus |
3L | 5929104..5929902 | 710..1508 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 5919971..5920166 | 1..196 | 100 | -> | Plus |
arm_3L | 5921324..5921396 | 197..269 | 100 | -> | Plus |
arm_3L | 5921637..5921740 | 270..373 | 100 | -> | Plus |
arm_3L | 5921804..5922139 | 374..709 | 100 | -> | Plus |
arm_3L | 5922204..5923002 | 710..1508 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5921804..5922139 | 374..709 | 100 | -> | Plus |
3L | 5922204..5923002 | 710..1508 | 100 | Plus | |
3L | 5919971..5920166 | 1..196 | 100 | -> | Plus |
3L | 5921324..5921396 | 197..269 | 100 | -> | Plus |
3L | 5921637..5921740 | 270..373 | 100 | -> | Plus |
Translation from 187 to 891
> LP10490.pep MPRVTFVDSAPMVLKETNINKMHTPSEGMLHINPKDFVNFNSKNAEATMT IKSIATSAVTYKIQTTSPEKFRVRPRCGIIQPNQEATINIWLKSEHKLSD DSKDKFLVMAMVAPGGECGGADVTELWRSKSPTSADVEQHRLVCRFDENK SKAQLDCASKSSKASVDCSKKSGAGVDPATAMERQLAFTQNLQYVTLALL FLLFAGFGFLMYQQLGQHAATCPKATAYSCAKRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24005-PA | 662 | GF24005-PA | 268..503 | 3..228 | 805 | 69.1 | Plus |
Dana\GF23828-PA | 176 | GF23828-PA | 26..142 | 29..145 | 184 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15302-PA | 497 | GG15302-PA | 267..497 | 3..234 | 1039 | 89.7 | Plus |
Dere\GG13971-PA | 166 | GG13971-PA | 8..122 | 30..144 | 194 | 32.2 | Plus |
Dere\GG14468-PA | 232 | GG14468-PA | 1..172 | 22..191 | 147 | 24.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14689-PA | 482 | GH14689-PA | 260..482 | 8..234 | 503 | 45.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33523-PA | 234 | CG33523-PA | 1..234 | 1..234 | 1214 | 100 | Plus |
CG33523-PD | 498 | CG33523-PD | 267..498 | 3..234 | 1199 | 99.6 | Plus |
CG33523-PF | 654 | CG33523-PF | 267..498 | 3..234 | 1199 | 99.6 | Plus |
CG33523-PC | 240 | CG33523-PC | 10..240 | 4..234 | 1197 | 100 | Plus |
CG33523-PB | 206 | CG33523-PB | 1..206 | 29..234 | 1068 | 100 | Plus |
CG6527-PB | 166 | CG6527-PB | 8..141 | 30..163 | 186 | 28.4 | Plus |
CG6527-PA | 166 | CG6527-PA | 8..141 | 30..163 | 186 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13304-PA | 504 | GI13304-PA | 272..504 | 3..234 | 500 | 50.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21079-PA | 498 | GL21079-PA | 269..497 | 3..234 | 607 | 54.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28323-PA | 498 | GA28323-PA | 269..497 | 3..234 | 602 | 54.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14735-PA | 497 | GM14735-PA | 266..497 | 3..234 | 1225 | 97.4 | Plus |
Dsec\GM24808-PA | 162 | GM24808-PA | 8..141 | 30..163 | 192 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13915-PA | 240 | GD13915-PA | 10..240 | 4..234 | 1217 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12072-PA | 487 | GJ12072-PA | 272..487 | 3..234 | 433 | 44.1 | Plus |
Translation from 187 to 891
> LP10490.hyp MPRVTFVDSAPMVLKETNINKMHTPSEGMLHINPKDFVNFNSKNAEATMT IKSIATSAVTYKIQTTSPEKFRVRPRCGIIQPNQEATINIWLKSEHKLSD DSKDKFLVMAMVAPGGECGGADVTELWRSKSPTSADVEQHRLVCRFDENK SKAQLDCASKSSKASVDCSKKSGAGVDPATAMERQLAFTQNLQYVTLALL FLLFAGFGFLMYQQLGQHAATCPKATAYSCAKRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Vap-33B-PA | 234 | CG33523-PA | 1..234 | 1..234 | 1214 | 100 | Plus |
Vap-33B-PD | 498 | CG33523-PD | 267..498 | 3..234 | 1199 | 99.6 | Plus |
Vap-33B-PF | 654 | CG33523-PF | 267..498 | 3..234 | 1199 | 99.6 | Plus |
Vap-33B-PC | 240 | CG33523-PC | 10..240 | 4..234 | 1197 | 100 | Plus |
Vap-33B-PB | 206 | CG33523-PB | 1..206 | 29..234 | 1068 | 100 | Plus |