LP10657.complete Sequence
769 bp (769 high quality bases) assembled on 2002-11-16
GenBank Submission: BT003551
> LP10657.complete
CAACGGGATAGTGCGGTTTTATCGGTTGCTTAAATAAATTGAACACTTTC
CAGAATGCACGCGACTGTCATCTCGGCTTTCGGGATAGTATATCTACTGT
TCCTGTTCCTGGGACATCTTTCTGCTCAAATTACCGTGAGTCCAAGCACG
TTCAATCCTCTTATGGTCGACAGCAAGCCGGAACCCGCCACAAAAAACTC
TTGGCACATTAATAATTATTATCCAAAAAGGTGGTTAATAAATATGAATA
GTTCCGATAAGAAACTCAGACAATCCTACGATTACCGCCCGCTGCACAAT
CCCCTCTATGGGTAACCAGTTCCAAAGTCCACTTAGTCTTTGCTCTCGAA
TCGGTCATCCAAGCCTTTGAGATTACATTTAAATATGTCATGAAATACAT
AGCATGATATACATACATATATAGCATGAGTAACGAAATATGTATATGTG
CAACAAGTTCTGATTGTTAAAGCTACTCGATTCTAATTTAAAATCAAGGT
CAATACAAAATGCTCTTATCAACATATATGAATCACATATGTATTAAGAT
GTAAAATCTCATTTTTAATTAAGCATTAATGTGAAATGAAAGTGCCTTTT
TGCCGTGTGTATTTTTTATATGTAAGGCCCCTTTAAAGTCGGCAGTCAAC
TGTTTGTTTACTGAGTCAGAATCTTGGAGTCGCCATGATCAGTCGCATTG
AAATATTTATTTTTATTCATATAAATTCCATAATAATCAAAACTGGAAAT
TAAAAAAAAAAAAAAAAAA
LP10657.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 20:53:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33494-RA | 1091 | CG33494-RA | 58..824 | 1..767 | 3835 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:15:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 21316706..21317207 | 751..250 | 2495 | 99.8 | Minus |
chr3R | 27901430 | chr3R | 21317341..21317546 | 251..46 | 1030 | 100 | Minus |
chr3R | 27901430 | chr3R | 21318243..21318287 | 45..1 | 225 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:54:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:15:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 25493563..25494080 | 767..250 | 2590 | 100 | Minus |
3R | 32079331 | 3R | 25494215..25494420 | 251..46 | 1030 | 100 | Minus |
3R | 32079331 | 3R | 25495117..25495161 | 45..1 | 225 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:12:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 25234394..25234911 | 767..250 | 2590 | 100 | Minus |
3R | 31820162 | 3R | 25235046..25235251 | 251..46 | 1030 | 100 | Minus |
3R | 31820162 | 3R | 25235948..25235992 | 45..1 | 225 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 16:15:16 has no hits.
LP10657.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:15:58 Download gff for
LP10657.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 21316711..21317205 | 252..746 | 99 | <- | Minus |
chr3R | 21317341..21317546 | 46..251 | 100 | <- | Minus |
chr3R | 21318243..21318287 | 1..45 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:40:44 Download gff for
LP10657.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33494-RA | 1..261 | 55..315 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:49:51 Download gff for
LP10657.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33494-RA | 1..261 | 55..315 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:57:47 Download gff for
LP10657.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33494-RA | 1..261 | 55..315 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:31:59 Download gff for
LP10657.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33494-RA | 1..261 | 55..315 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:31:20 Download gff for
LP10657.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33494-RA | 1..261 | 55..315 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:00:30 Download gff for
LP10657.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33494-RA | 1..751 | 1..751 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:49:51 Download gff for
LP10657.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33494-RA | 1..751 | 1..751 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:57:47 Download gff for
LP10657.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33494-RA | 1..751 | 1..751 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:31:59 Download gff for
LP10657.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33494-RA | 1..751 | 1..751 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:31:20 Download gff for
LP10657.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33494-RA | 1..751 | 1..751 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:15:58 Download gff for
LP10657.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25494215..25494420 | 46..251 | 100 | <- | Minus |
3R | 25495117..25495161 | 1..45 | 100 | | Minus |
3R | 25493579..25494078 | 252..751 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:15:58 Download gff for
LP10657.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25494215..25494420 | 46..251 | 100 | <- | Minus |
3R | 25495117..25495161 | 1..45 | 100 | | Minus |
3R | 25493579..25494078 | 252..751 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:15:58 Download gff for
LP10657.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25494215..25494420 | 46..251 | 100 | <- | Minus |
3R | 25495117..25495161 | 1..45 | 100 | | Minus |
3R | 25493579..25494078 | 252..751 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:57:47 Download gff for
LP10657.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21319301..21319800 | 252..751 | 100 | <- | Minus |
arm_3R | 21319937..21320142 | 46..251 | 100 | <- | Minus |
arm_3R | 21320839..21320883 | 1..45 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:11:33 Download gff for
LP10657.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25234410..25234909 | 252..751 | 100 | <- | Minus |
3R | 25235046..25235251 | 46..251 | 100 | <- | Minus |
3R | 25235948..25235992 | 1..45 | 100 | | Minus |
LP10657.pep Sequence
Translation from 54 to 314
> LP10657.pep
MHATVISAFGIVYLLFLFLGHLSAQITVSPSTFNPLMVDSKPEPATKNSW
HINNYYPKRWLINMNSSDKKLRQSYDYRPLHNPLYG*
LP10657.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:13:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33494-PB | 86 | CG33494-PB | 1..86 | 1..86 | 465 | 100 | Plus |
CG33494-PA | 86 | CG33494-PA | 1..86 | 1..86 | 465 | 100 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 22:53:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD18191-PA | 99 | GD18191-PA | 1..90 | 1..85 | 257 | 60 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 22:53:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE10690-PA | 131 | GE10690-PA | 1..80 | 1..72 | 143 | 43.8 | Plus |
LP10657.hyp Sequence
Translation from 54 to 314
> LP10657.hyp
MHATVISAFGIVYLLFLFLGHLSAQITVSPSTFNPLMVDSKPEPATKNSW
HINNYYPKRWLINMNSSDKKLRQSYDYRPLHNPLYG*
LP10657.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:49:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33494-PB | 86 | CG33494-PB | 1..86 | 1..86 | 465 | 100 | Plus |
CG33494-PA | 86 | CG33494-PA | 1..86 | 1..86 | 465 | 100 | Plus |