Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
LP10814.complete Sequence
888 bp assembled on 2008-05-27
GenBank Submission: BT032851.1
> LP10814.complete
TCGCATTTCTCGAACAAGTTACAGAAATGTATCAAAATTTTTTCAGTTAA
AAAACTACATTGCCGACGAAATGTCGGCACAAGGCTTGGTTCCTCGCCCG
AATCCGAGGAATCCAAACCAGGAAACAACGTTGATAATGATCGACAAAAT
TACTCACTACTCATGAACACGATGCTCCATAACTGCCGGACGAGCACCAA
TCGGCGACCCAGTTCCGGAGGATCATCAAGCTGCAAAACCCATGACACTA
GACTGTAAAAGTACACATTGTTACAGCAGCAGTGCACAAGGCTTGATTCC
TCGCCCGAATCCGAGGAATCTAAGCCAGGAAACGACGTTTGATCATGATT
CGCCACGTGTGGGACTAGATTTTTCACTACCTATGAACACGATGCTTTCT
TTATACGACACTGGATGGTAACACGATGGTAACACGAATTGATACTGCGT
TGATTTGGATCGTTGAACACAGTTACATACGTTACATTTTGCACGTTTTC
TATTGCGATTTACAATTAGTTTTGCCAGTTCACACAATCTCCTTTGATTA
TTGTAAGCCAATTAATACTACTTACAGTGACAATACTAAAATACAGCTGT
GTATGAAAGTGGACAATACACAAAACCATACACTACAACTAAAACAAAAA
CAAATCAGAATTTGAAAGTGGACTAGAAGTAACACTTATTACACAGACAC
CGAATGTTATAACAAATACACTGAAAACACACAAATAAAATATTGTATAC
GTCATCCCAAAGAATAAAAACATCGATTAATTGAGCTAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
LP10814.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:52:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32690-RA | 831 | CG32690-RA | 40..831 | 1..792 | 3960 | 100 | Plus |
CG32690.b | 1165 | CG32690.b | 40..831 | 1..792 | 3960 | 100 | Plus |
CG32690.a | 1524 | CG32690.a | 40..831 | 1..792 | 3960 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:11:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 10096163..10096895 | 55..787 | 3650 | 99.9 | Plus |
chrX | 22417052 | chrX | 9449611..9449974 | 398..55 | 970 | 86.3 | Minus |
chrX | 22417052 | chrX | 9449255..9449408 | 784..647 | 310 | 83.1 | Minus |
chrX | 22417052 | chrX | 9449382..9449506 | 614..493 | 290 | 84 | Minus |
chrX | 22417052 | chrX | 10096044..10096097 | 1..54 | 270 | 100 | Plus |
chrX | 22417052 | chrX | 9449572..9449724 | 217..77 | 235 | 78.4 | Minus |
chrX | 22417052 | chrX | 10096185..10096240 | 284..339 | 220 | 92.9 | Plus |
chrX | 22417052 | chrX | 10096392..10096447 | 77..132 | 220 | 92.9 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:54:44 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:11:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 10204557..10205294 | 55..792 | 3690 | 100 | Plus |
X | 23542271 | X | 9557898..9558261 | 398..55 | 970 | 86.3 | Minus |
X | 23542271 | X | 9557536..9557695 | 790..647 | 325 | 83.1 | Minus |
X | 23542271 | X | 9557669..9557793 | 614..493 | 290 | 84 | Minus |
X | 23542271 | X | 10204438..10204491 | 1..54 | 270 | 100 | Plus |
X | 23542271 | X | 9557859..9558011 | 217..77 | 235 | 78.4 | Minus |
X | 23542271 | X | 10204579..10204634 | 284..339 | 220 | 92.9 | Plus |
X | 23542271 | X | 10204786..10204841 | 77..132 | 220 | 92.9 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:49:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 10212655..10213392 | 55..792 | 3690 | 100 | Plus |
X | 23527363 | X | 9566148..9566359 | 265..55 | 735 | 90.5 | Minus |
X | 23527363 | X | 9565996..9566131 | 398..262 | 510 | 92.7 | Minus |
X | 23527363 | X | 9565634..9565730 | 790..695 | 310 | 89.6 | Minus |
X | 23527363 | X | 10212536..10212589 | 1..54 | 270 | 100 | Plus |
X | 23527363 | X | 9565743..9565793 | 697..647 | 225 | 96 | Minus |
X | 23527363 | X | 9565833..9565891 | 551..493 | 220 | 91.5 | Minus |
X | 23527363 | X | 9566045..9566109 | 141..77 | 220 | 89.2 | Minus |
X | 23527363 | X | 9566270..9566337 | 352..284 | 185 | 86.9 | Minus |
X | 23527363 | X | 9565957..9566025 | 217..149 | 180 | 84 | Minus |
X | 23527363 | X | 9565767..9565821 | 614..560 | 155 | 85.4 | Minus |
Blast to na_te.dros performed 2019-03-15 15:11:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Juan | 4236 | Juan JUAN 4236bp | 3787..3925 | 562..700 | 117 | 59.4 | Plus |
Porto1 | 4682 | Porto1 DOC5 4682bp | 4414..4507 | 691..779 | 115 | 62.8 | Plus |
LP10814.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:12:23 Download gff for
LP10814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 10096044..10096097 | 1..54 | 100 | -> | Plus |
chrX | 10096163..10096895 | 55..787 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:40:49 Download gff for
LP10814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32690-RA | 1..240 | 426..665 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:45:18 Download gff for
LP10814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32690-RA | 1..240 | 426..665 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:09:05 Download gff for
LP10814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32690-RA | 1..665 | 1..665 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:45:19 Download gff for
LP10814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32690-RA | 1..665 | 1..665 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:12:23 Download gff for
LP10814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10204438..10204491 | 1..54 | 100 | -> | Plus |
X | 10204557..10205289 | 55..787 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:12:23 Download gff for
LP10814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10204438..10204491 | 1..54 | 100 | -> | Plus |
X | 10204557..10205289 | 55..787 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:12:23 Download gff for
LP10814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10204438..10204491 | 1..54 | 100 | -> | Plus |
X | 10204557..10205289 | 55..787 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:06:50 Download gff for
LP10814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 10098471..10098524 | 1..54 | 100 | -> | Plus |
arm_X | 10098590..10099322 | 55..787 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:06:50 Download gff for
LP10814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 10098471..10098524 | 1..54 | 100 | -> | Plus |
arm_X | 10098590..10099322 | 55..787 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:06:50 Download gff for
LP10814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 10098471..10098524 | 1..54 | 100 | -> | Plus |
arm_X | 10098590..10099322 | 55..787 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:21:41 Download gff for
LP10814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10212655..10213387 | 55..787 | 100 | | Plus |
X | 10212536..10212589 | 1..54 | 100 | -> | Plus |
LP10814.hyp Sequence
Translation from 0 to 257
> LP10814.hyp
SHFSNKLQKCIKIFSVKKLHCRRNVGTRLGSSPESEESKPGNNVDNDRQN
YSLLMNTMLHNCRTSTNRRPSSGGSSSCKTHDTRL*
Sequence LP10814.hyp has no blast hits.
LP10814.pep Sequence
Translation from 425 to 664
> LP10814.pep
MVTRIDTALIWIVEHSYIRYILHVFYCDLQLVLPVHTISFDYCKPINTTY
SDNTKIQLCMKVDNTQNHTLQLKQKQIRI*
Sequence LP10814.pep has no blast hits.