BDGP Sequence Production Resources |
Search the DGRC for LP10820
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 108 |
Well: | 20 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4025-RA |
Protein status: | LP10820.pep: gold |
Preliminary Size: | 842 |
Sequenced Size: | 1242 |
Gene | Date | Evidence |
---|---|---|
CG4025 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4025 | 2002-06-04 | Blastp of sequenced clone |
CG4025 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4025 | 2008-04-29 | Release 5.5 accounting |
CG4025 | 2008-08-15 | Release 5.9 accounting |
CG4025 | 2008-12-18 | 5.12 accounting |
1242 bp (1242 high quality bases) assembled on 2002-06-04
GenBank Submission: AY118613
> LP10820.complete CGCTCCCTTGTTCGTGTTATTGCAGCGCAATTAAATAAGATACGTTAGTT GTGGCCAGTGCTGCAACTTACCACCACCCGGATACACCATTCCCTAGCGC GATGTCACAGGTTTACTTGCTGCCGGTGCTCACGTTCCTGATATTCCAGG TCACCTTTCTTGGCACGTACATCTTCGCCGTGCTGGAGGGGCATGTGGTG CCCACGGTTCCCTACATCAGCGATGCGGCCACCTACTCGCCGGAAAGCTG TGTGTTCGGGCAGCTTATCAACATAGGCAGCGTTCTGCTTGGAATTACCA TCTACGTACGCTACCGTCAGGTGCTGCAGCTTTATGAACACCATCCGGAT TTGGACGGGTCGGTGCTGCGCCAGAACCGACTAGCCTTGTGGTTCGGACT GGTGTCCTGCCTGGGCATTAGCTTCGTGGGCAACTTTCAGGAGACGAACG TGCGGATTGTCCACTTCATCGGAGCCTTCTGCTGCTTCGGCTGCGGCACC TTGTACTTTTGGATGCAGGCGCTCATCTCGTATCTGATCTTCCCCATGTC GGGTACCCGCATTAACGCTCACTTGCGGCTGGGCATGTCCGTTGTCTGCA CGATCCTGTTCATCCTGCTGGCGGTCACCGGCGTGATGTCGCACATCCTC TTCAAAGGACAGAATCCTCGAAAGTGGTATCCCTCGGACGGCGGCTGGTA CTTCCACGTGGTCAGCTCTATTTCAGAGTGGGTCATCGCCACCGTCTTCA GCTTCTTTATCCTCTCCTTCACGAATGAGTTCCGCGACGTGTCGCTGTCG CATCCCCAGATTGCCCTGATGTCCTATTCGACCACCATCTAGAGCTTACC TTCATAGATCAGAAGATCAGATAGTAGAGATCAGCGTCTGAAGTAGGCAG CGGTTCCTTCACCTTCAACATTTTAAGTACAATCTAAGGTGGCAAGAGCA CGGGCCTCGAGGACGATGTGCTGAGCGGCTGATGTGCACTGCGGCCTCTC GCCTGCCTTTCCTCTCTTTCCGGTGCTCTTTCTCTGTCGGATTGCTGTGA TATGTGCAAAGTGTTTCCCAAAGACTGGGATCGGGTAGTTCGAAGTGACA GAATGCTTTTTGATTGAAGAGTTACATTTATTGTTTACCCGCGTTCGTTT TTTCAATACACATTAGCATTACTAAATCGGTAGAAATAATCTGTAAATTT GTAAAATAAAGAGCAATTAAATATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 1971821..1972369 | 676..1224 | 2730 | 99.8 | Plus |
chrX | 22417052 | chrX | 1971366..1971755 | 289..678 | 1950 | 100 | Plus |
chrX | 22417052 | chrX | 1970896..1971064 | 1..169 | 845 | 100 | Plus |
chrX | 22417052 | chrX | 1971132..1971253 | 167..288 | 610 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 2077907..2078457 | 676..1226 | 2755 | 100 | Plus |
X | 23542271 | X | 2077452..2077841 | 289..678 | 1950 | 100 | Plus |
X | 23542271 | X | 2076982..2077150 | 1..169 | 845 | 100 | Plus |
X | 23542271 | X | 2077218..2077339 | 167..288 | 610 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 2086005..2086555 | 676..1226 | 2755 | 100 | Plus |
X | 23527363 | X | 2085550..2085939 | 289..678 | 1950 | 100 | Plus |
X | 23527363 | X | 2085080..2085248 | 1..169 | 845 | 100 | Plus |
X | 23527363 | X | 2085316..2085437 | 167..288 | 610 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 1970896..1971061 | 1..166 | 100 | -> | Plus |
chrX | 1971132..1971253 | 167..288 | 100 | -> | Plus |
chrX | 1971366..1971753 | 289..676 | 100 | -> | Plus |
chrX | 1971822..1972369 | 677..1224 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4025-RA | 1..741 | 102..842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4025-RA | 1..741 | 102..842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4025-RA | 1..741 | 102..842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4025-RA | 1..741 | 102..842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4025-RA | 1..741 | 102..842 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4025-RA | 1..1224 | 1..1224 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4025-RA | 1..1224 | 1..1224 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4025-RA | 17..1240 | 1..1224 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4025-RA | 1..1224 | 1..1224 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4025-RA | 17..1240 | 1..1224 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2076982..2077147 | 1..166 | 100 | -> | Plus |
X | 2077218..2077339 | 167..288 | 100 | -> | Plus |
X | 2077452..2077839 | 289..676 | 100 | -> | Plus |
X | 2077908..2078455 | 677..1224 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2076982..2077147 | 1..166 | 100 | -> | Plus |
X | 2077218..2077339 | 167..288 | 100 | -> | Plus |
X | 2077452..2077839 | 289..676 | 100 | -> | Plus |
X | 2077908..2078455 | 677..1224 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2076982..2077147 | 1..166 | 100 | -> | Plus |
X | 2077218..2077339 | 167..288 | 100 | -> | Plus |
X | 2077452..2077839 | 289..676 | 100 | -> | Plus |
X | 2077908..2078455 | 677..1224 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 1971015..1971180 | 1..166 | 100 | -> | Plus |
arm_X | 1971251..1971372 | 167..288 | 100 | -> | Plus |
arm_X | 1971485..1971872 | 289..676 | 100 | -> | Plus |
arm_X | 1971941..1972488 | 677..1224 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2085550..2085937 | 289..676 | 100 | -> | Plus |
X | 2086006..2086553 | 677..1224 | 100 | Plus | |
X | 2085080..2085245 | 1..166 | 100 | -> | Plus |
X | 2085316..2085437 | 167..288 | 100 | -> | Plus |
Translation from 101 to 841
> LP10820.hyp MSQVYLLPVLTFLIFQVTFLGTYIFAVLEGHVVPTVPYISDAATYSPESC VFGQLINIGSVLLGITIYVRYRQVLQLYEHHPDLDGSVLRQNRLALWFGL VSCLGISFVGNFQETNVRIVHFIGAFCCFGCGTLYFWMQALISYLIFPMS GTRINAHLRLGMSVVCTILFILLAVTGVMSHILFKGQNPRKWYPSDGGWY FHVVSSISEWVIATVFSFFILSFTNEFRDVSLSHPQIALMSYSTTI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4025-PA | 246 | CG4025-PA | 1..246 | 1..246 | 1294 | 100 | Plus |
Translation from 101 to 841
> LP10820.pep MSQVYLLPVLTFLIFQVTFLGTYIFAVLEGHVVPTVPYISDAATYSPESC VFGQLINIGSVLLGITIYVRYRQVLQLYEHHPDLDGSVLRQNRLALWFGL VSCLGISFVGNFQETNVRIVHFIGAFCCFGCGTLYFWMQALISYLIFPMS GTRINAHLRLGMSVVCTILFILLAVTGVMSHILFKGQNPRKWYPSDGGWY FHVVSSISEWVIATVFSFFILSFTNEFRDVSLSHPQIALMSYSTTI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21936-PA | 246 | GF21936-PA | 1..246 | 1..246 | 1186 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12904-PA | 246 | GG12904-PA | 1..246 | 1..246 | 1259 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24452-PA | 246 | GH24452-PA | 1..246 | 1..246 | 1153 | 85.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4025-PA | 246 | CG4025-PA | 1..246 | 1..246 | 1294 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21652-PA | 246 | GI21652-PA | 1..246 | 1..246 | 1146 | 84.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18336-PA | 246 | GL18336-PA | 1..246 | 1..246 | 1175 | 88.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17883-PA | 246 | GA17883-PA | 1..246 | 1..246 | 1175 | 88.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19194-PA | 223 | GM19194-PA | 1..223 | 1..246 | 1102 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16585-PA | 246 | GD16585-PA | 1..246 | 1..246 | 1268 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16890-PA | 246 | GJ16890-PA | 1..246 | 1..246 | 1118 | 82.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10247-PA | 246 | GK10247-PA | 1..246 | 1..246 | 1112 | 83.3 | Plus |