BDGP Sequence Production Resources |
Search the DGRC for LP10852
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 108 |
Well: | 52 |
Vector: | pOT2 |
Associated Gene/Transcript | mRpS18B-RA |
Protein status: | LP10852.pep: gold |
Preliminary Size: | 871 |
Sequenced Size: | 751 |
Gene | Date | Evidence |
---|---|---|
CG10757 | 2001-01-01 | Release 2 assignment |
CG10757 | 2002-01-03 | Blastp of sequenced clone |
CG10757 | 2003-01-01 | Sim4 clustering to Release 3 |
mRpS18B | 2008-04-29 | Release 5.5 accounting |
mRpS18B | 2008-08-15 | Release 5.9 accounting |
mRpS18B | 2008-12-18 | 5.12 accounting |
751 bp (751 high quality bases) assembled on 2002-01-03
GenBank Submission: AY075438
> LP10852.complete CCGAACCCAGGCGTCGGCGCTCTATTTTTTTATGGTGGCATCCAAATTAA CTTCAGGTTTTATTCAATTAAAATGTTGCCGATTGCACGTGGAATTTACA TTGGACTGGTCAACATTACCCGGAATAGCCGGGGAGCTCTTCACACGGCC AGCGCCTTGAGATGCAAGGCGGAGACTTCGACTGAAGAAAATAATGCGGC TGCCACCGAAGGCGAAGGCGAGGATAACGCTAGTGGTTCCGCACCAGACC CGAAGGATCGCAGCAAACCAATCCCAGTGGAGACCTCGATTCGATACTTA AAGAGCGCCGCTTACAAGCAAACCTACGGCGAGGACTTTGTGTGGACGCA GTATCGGCGCAACCACAAGGGCATGTATGCGCCGCGCAAAACACGAAAGA CGTGCATCCGCCAGAACCGTATCAGCACCGGAAATCCCTGTCCCATTTGC CGTGATGAATACCTGGTGCTGGACTACCGCAACACGGAGCTCCTGGAGCA GTTCATATCGCCCCACAGCGGAGACGTCCTTAGCTACTCAAAGACAGGCC TGTGTCAAAAGAGCCACCTGCGTCTAATGGTCGCCGTTCAGCAAGCCCGC GACTCCGGGTACCTAACATACGATGTGCCCTTCAGGGAGTATGATTACAG CGAGTACTACGGCCAGGAGCAGAAGCAGAAAGCTTAACCAACTAATGATT AACATGTTTTTATTAAAAGAAATTACTGTAAAAAAAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpS18B-RA | 729 | mRpS18B-RA | 1..729 | 1..729 | 3645 | 100 | Plus |
mRpS18B-RB | 904 | mRpS18B-RB | 120..808 | 48..736 | 3430 | 99.8 | Plus |
mRpS18B.a | 745 | mRpS18B.a | 381..744 | 369..732 | 1820 | 100 | Plus |
mRpS18B.a | 745 | mRpS18B.a | 73..382 | 48..357 | 1550 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 20094840..20095213 | 729..356 | 1840 | 99.5 | Minus |
chr2L | 23010047 | chr2L | 20095274..20095583 | 357..48 | 1535 | 99.7 | Minus |
chr2L | 23010047 | chr2L | 20096428..20096474 | 47..1 | 235 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 20096424..20096804 | 736..356 | 1890 | 99.7 | Minus |
2L | 23513712 | 2L | 20096865..20097174 | 357..48 | 1550 | 100 | Minus |
2L | 23513712 | 2L | 20098019..20098065 | 47..1 | 235 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 20096424..20096804 | 736..356 | 1890 | 99.7 | Minus |
2L | 23513712 | 2L | 20096865..20097174 | 357..48 | 1550 | 100 | Minus |
2L | 23513712 | 2L | 20098019..20098065 | 47..1 | 235 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 20094840..20095212 | 357..729 | 99 | <- | Minus |
chr2L | 20095275..20095583 | 48..356 | 99 | <- | Minus |
chr2L | 20096428..20096474 | 1..47 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS18B-RB | 1..615 | 73..687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS18B-RB | 1..615 | 73..687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS18B-RA | 1..615 | 73..687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS18B-RB | 1..615 | 73..687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS18B-RA | 1..615 | 73..687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS18B-RA | 1..729 | 1..729 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS18B-RA | 1..729 | 1..729 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS18B-RA | 77..761 | 45..729 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS18B-RA | 1..729 | 1..729 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS18B-RA | 77..761 | 45..729 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20096431..20096803 | 357..729 | 100 | <- | Minus |
2L | 20096866..20097174 | 48..356 | 100 | <- | Minus |
2L | 20098019..20098065 | 1..47 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20096431..20096803 | 357..729 | 100 | <- | Minus |
2L | 20096866..20097174 | 48..356 | 100 | <- | Minus |
2L | 20098019..20098065 | 1..47 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20096431..20096803 | 357..729 | 100 | <- | Minus |
2L | 20096866..20097174 | 48..356 | 100 | <- | Minus |
2L | 20098019..20098065 | 1..47 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 20096431..20096803 | 357..729 | 100 | <- | Minus |
arm_2L | 20096866..20097174 | 48..356 | 100 | <- | Minus |
arm_2L | 20098019..20098065 | 1..47 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20096431..20096803 | 357..729 | 100 | <- | Minus |
2L | 20096866..20097174 | 48..356 | 100 | <- | Minus |
2L | 20098019..20098065 | 1..47 | 100 | Minus |
Translation from 0 to 686
> LP10852.hyp PNPGVGALFFYGGIQINFRFYSIKMLPIARGIYIGLVNITRNSRGALHTA SALRCKAETSTEENNAAATEGEGEDNASGSAPDPKDRSKPIPVETSIRYL KSAAYKQTYGEDFVWTQYRRNHKGMYAPRKTRKTCIRQNRISTGNPCPIC RDEYLVLDYRNTELLEQFISPHSGDVLSYSKTGLCQKSHLRLMVAVQQAR DSGYLTYDVPFREYDYSEYYGQEQKQKA*
Translation from 72 to 686
> LP10852.pep MLPIARGIYIGLVNITRNSRGALHTASALRCKAETSTEENNAAATEGEGE DNASGSAPDPKDRSKPIPVETSIRYLKSAAYKQTYGEDFVWTQYRRNHKG MYAPRKTRKTCIRQNRISTGNPCPICRDEYLVLDYRNTELLEQFISPHSG DVLSYSKTGLCQKSHLRLMVAVQQARDSGYLTYDVPFREYDYSEYYGQEQ KQKA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15452-PA | 209 | GF15452-PA | 1..206 | 1..203 | 942 | 85.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21586-PA | 204 | GG21586-PA | 1..204 | 1..204 | 1033 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13236-PA | 205 | GH13236-PA | 1..199 | 1..201 | 802 | 73.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpS18B-PB | 204 | CG10757-PB | 1..204 | 1..204 | 1079 | 100 | Plus |
mRpS18B-PA | 204 | CG10757-PA | 1..204 | 1..204 | 1079 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12473-PA | 203 | GI12473-PA | 1..202 | 1..203 | 854 | 78.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26668-PA | 196 | GL26668-PA | 1..195 | 1..200 | 876 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA29010-PA | 200 | GA29010-PA | 1..199 | 1..200 | 833 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16961-PA | 204 | GM16961-PA | 1..204 | 1..204 | 1059 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21714-PA | 204 | GD21714-PA | 1..204 | 1..204 | 1059 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17885-PA | 201 | GJ17885-PA | 1..200 | 1..203 | 804 | 75.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18744-PA | 210 | GK18744-PA | 1..208 | 1..203 | 802 | 74.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12605-PA | 204 | GE12605-PA | 1..204 | 1..204 | 1025 | 93.1 | Plus |