BDGP Sequence Production Resources |
Search the DGRC for LP11136
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 111 |
Well: | 36 |
Vector: | pOT2 |
Associated Gene/Transcript | Cep89-RA |
Protein status: | LP11136.pep: gold |
Preliminary Size: | 1436 |
Sequenced Size: | 1501 |
Gene | Date | Evidence |
---|---|---|
CG8214 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8214 | 2002-05-18 | Blastp of sequenced clone |
CG8214 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8214 | 2008-04-29 | Release 5.5 accounting |
CG8214 | 2008-08-15 | Release 5.9 accounting |
CG8214 | 2008-12-18 | 5.12 accounting |
1501 bp (1501 high quality bases) assembled on 2002-05-18
GenBank Submission: AY119085
> LP11136.complete CCACAATGAGCACGCGAAATGTGATGATAACGGACCTGGATCAGCCAGAT CCGAACCAGCAGCAGCATCATCAAAATCCCAAAAAGAACCGAAAGGTTCT CCAAACTCTGTCGGGCAATTTTAATCGTCGGTCACGAAGCGTGGAGGTGG AAGTAAAGCGACAGGATAACTTGGGTGTTGTCCACAAAGATCGCAAAAAG GATCGTTCGTTTAACTCGCTGTTGCAAGCCAAGGACCAGCAGTTGGAGCA GCTTGTGCAGCGATTAGCCACCCTGCATCGATACAACGACCAATTCGCCA AGGAGAATGACCAACTACGCAAGGACAGCGGCCAGCTGGAGCGGCGTCTT ACGGAGGCGGAGCAGCAGGTTGCCAATTGCAGCCGCTGTCAACAGCTCGG CCAACGACTGGACACCGTTCTTGCACAGAATAGAACATTAGCCGGCGACG TGGACATGCTGAAGACGCTCGTCTTCAGGCTGAACGTGCAAATTGAGAGT TACCAGGATCAACGGCGTCTCGGTGAGGGTGCACCCACTTGTGGAGGATC AACGAAAGTCAGCTCGTCATCTGCTCCGTATCCGCCACTGCCCACTCACA CGTTGGGACCACTCCTGCAGGCATACGATGAATCTCTAAGGGATAAGGAC GCTCTTTTGGCTCAATATAACACAGAGTTCGAGCACTTCACTGGGGAACT AAAGCGAGCCCTGGAGGAGAACACAAAGCTGCTGCAGTCCCAGGAGCAAC TGCGTCGTGACCTCGGCGGCTGGCGAGAGGAGCGAGTGTGTCTGCAGGCC CAACTAGGAGTATGCCGCTCCAAAGCGGAGGCGCAAACTCGCAAGACGGA CTTGGCCAAGGAGAAGCTGGTGGAAGTGATGCACTGCTACGAACAGCGCA TGCAGACGCTGATCCTGGACATGGATCACCTGCAGGCGGCCTACGCGCGA ACTAAATCCGAACTAGCCGCGCTTAAAAGTGCCTCATCGGCGGCGCCCGC TGCGGTTGCTCCTCCAGTTCCCGCCGAATCCGAGGCACTGCATCAGTGCA AAGCCCTGCTTGAGCAATTGCGGCAGGAGCATGCGAGAGAGCGAACTTGC CTCCAGGAACAGCTGCAAGCCACCACCGCACGGGCAGCTTCACTGGTCCG CAGCACGGAAAAAGCCAAGCACAGCAGAGATCGGCTTAAGGCTCGTCTGA GAATGGCGCTGCAGTGGGCCCAAAAGCTGGAGGCAGGGCAGGCTGAGGTG CGCGATACCTACGAGGCGGTACGCCGCCTGGAAGTACTTGTCCAGCACAA GGAGTCACAATTGCGCGGATTGCATGCCCGGAATGCAGAAGAAATGGACA AGTTGCGTCATAAGTTACAGCAGAAGGAGGAAACGATATGTGCGCTGCTT AGAGGCAAAATGGAGCGCAGACCGGCGGTGGATTAACGCGTAGAACATAG TTTTTAACAATTAAAAATATATAATTTCAATACAAAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 11574570..11575322 | 1483..731 | 3675 | 99.2 | Minus |
chr2R | 21145070 | chr2R | 11575386..11575896 | 731..221 | 2510 | 99.4 | Minus |
chr2R | 21145070 | chr2R | 11575947..11576167 | 221..1 | 1075 | 99.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 15687384..15688140 | 1487..731 | 3785 | 100 | Minus |
2R | 25286936 | 2R | 15688204..15688714 | 731..221 | 2555 | 100 | Minus |
2R | 25286936 | 2R | 15688765..15688985 | 221..1 | 1105 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 15688583..15689339 | 1487..731 | 3785 | 100 | Minus |
2R | 25260384 | 2R | 15689403..15689913 | 731..221 | 2555 | 100 | Minus |
2R | 25260384 | 2R | 15689964..15690184 | 221..1 | 1105 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6846..6900 | 34..88 | 113 | 67.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 11575947..11576167 | 1..221 | 99 | Minus | |
chr2R | 11574570..11575321 | 732..1483 | 99 | <- | Minus |
chr2R | 11575386..11575895 | 222..731 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8214-RA | 1..1431 | 6..1436 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8214-RA | 1..1431 | 6..1436 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8214-RA | 1..1431 | 6..1436 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8214-RA | 1..1431 | 6..1436 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cep89-RA | 1..1431 | 6..1436 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8214-RA | 1..1483 | 1..1483 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8214-RA | 1..1483 | 1..1483 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8214-RA | 1..1483 | 1..1483 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8214-RA | 1..1483 | 1..1483 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cep89-RA | 1..1483 | 1..1483 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15687388..15688139 | 732..1483 | 100 | <- | Minus |
2R | 15688204..15688713 | 222..731 | 100 | <- | Minus |
2R | 15688765..15688985 | 1..221 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15687388..15688139 | 732..1483 | 100 | <- | Minus |
2R | 15688204..15688713 | 222..731 | 100 | <- | Minus |
2R | 15688765..15688985 | 1..221 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15687388..15688139 | 732..1483 | 100 | <- | Minus |
2R | 15688204..15688713 | 222..731 | 100 | <- | Minus |
2R | 15688765..15688985 | 1..221 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 11574893..11575644 | 732..1483 | 100 | <- | Minus |
arm_2R | 11575709..11576218 | 222..731 | 100 | <- | Minus |
arm_2R | 11576270..11576490 | 1..221 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15688587..15689338 | 732..1483 | 100 | <- | Minus |
2R | 15689403..15689912 | 222..731 | 100 | <- | Minus |
2R | 15689964..15690184 | 1..221 | 100 | Minus |
Translation from 2 to 1435
> LP11136.hyp TMSTRNVMITDLDQPDPNQQQHHQNPKKNRKVLQTLSGNFNRRSRSVEVE VKRQDNLGVVHKDRKKDRSFNSLLQAKDQQLEQLVQRLATLHRYNDQFAK ENDQLRKDSGQLERRLTEAEQQVANCSRCQQLGQRLDTVLAQNRTLAGDV DMLKTLVFRLNVQIESYQDQRRLGEGAPTCGGSTKVSSSSAPYPPLPTHT LGPLLQAYDESLRDKDALLAQYNTEFEHFTGELKRALEENTKLLQSQEQL RRDLGGWREERVCLQAQLGVCRSKAEAQTRKTDLAKEKLVEVMHCYEQRM QTLILDMDHLQAAYARTKSELAALKSASSAAPAAVAPPVPAESEALHQCK ALLEQLRQEHARERTCLQEQLQATTARAASLVRSTEKAKHSRDRLKARLR MALQWAQKLEAGQAEVRDTYEAVRRLEVLVQHKESQLRGLHARNAEEMDK LRHKLQQKEETICALLRGKMERRPAVD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cep89-PA | 476 | CG8214-PA | 1..476 | 2..477 | 2413 | 100 | Plus |
Translation from 5 to 1435
> LP11136.pep MSTRNVMITDLDQPDPNQQQHHQNPKKNRKVLQTLSGNFNRRSRSVEVEV KRQDNLGVVHKDRKKDRSFNSLLQAKDQQLEQLVQRLATLHRYNDQFAKE NDQLRKDSGQLERRLTEAEQQVANCSRCQQLGQRLDTVLAQNRTLAGDVD MLKTLVFRLNVQIESYQDQRRLGEGAPTCGGSTKVSSSSAPYPPLPTHTL GPLLQAYDESLRDKDALLAQYNTEFEHFTGELKRALEENTKLLQSQEQLR RDLGGWREERVCLQAQLGVCRSKAEAQTRKTDLAKEKLVEVMHCYEQRMQ TLILDMDHLQAAYARTKSELAALKSASSAAPAAVAPPVPAESEALHQCKA LLEQLRQEHARERTCLQEQLQATTARAASLVRSTEKAKHSRDRLKARLRM ALQWAQKLEAGQAEVRDTYEAVRRLEVLVQHKESQLRGLHARNAEEMDKL RHKLQQKEETICALLRGKMERRPAVD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13375-PA | 473 | GF13375-PA | 1..473 | 1..476 | 1965 | 82.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22338-PA | 476 | GG22338-PA | 1..476 | 1..476 | 2141 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22965-PA | 490 | GH22965-PA | 11..490 | 6..476 | 1502 | 66.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cep89-PA | 476 | CG8214-PA | 1..476 | 1..476 | 2413 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18452-PA | 492 | GI18452-PA | 1..492 | 1..476 | 1377 | 64.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11859-PA | 489 | GL11859-PA | 1..489 | 1..476 | 1650 | 69.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20904-PA | 479 | GA20904-PA | 1..479 | 1..476 | 1838 | 76 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20125-PA | 453 | GM20125-PA | 1..453 | 1..476 | 2283 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25603-PA | 476 | GD25603-PA | 1..476 | 1..476 | 2436 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21537-PA | 520 | GJ21537-PA | 1..520 | 1..476 | 1457 | 62.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17959-PA | 489 | GK17959-PA | 1..489 | 1..476 | 1686 | 72.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14138-PA | 478 | GE14138-PA | 1..478 | 1..476 | 2203 | 93.5 | Plus |