BDGP Sequence Production Resources |
Search the DGRC for LP11234
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 112 |
Well: | 34 |
Vector: | pOT2 |
Associated Gene/Transcript | Oscillin-RA |
Protein status: | LP11234.pep: gold |
Preliminary Size: | 1329 |
Sequenced Size: | 1237 |
Gene | Date | Evidence |
---|---|---|
CG6957 | 2001-01-01 | Release 2 assignment |
CG6957 | 2002-06-12 | Blastp of sequenced clone |
CG6957 | 2003-01-01 | Sim4 clustering to Release 3 |
Oscillin | 2008-04-29 | Release 5.5 accounting |
Oscillin | 2008-08-15 | Release 5.9 accounting |
Oscillin | 2008-12-18 | 5.12 accounting |
1237 bp (1237 high quality bases) assembled on 2002-06-12
GenBank Submission: AY122220
> LP11234.complete CTCTTTTTCTCTCTCTTATTCCAACCGCAGCCGCAAAAACAAACTCAAAC TCGAGCTAATCGCTGCATAAATTTGCTGTTCGAATTGAACAATTGAACAG TCTCAGTTAGCAGCTGAAATCGGAAATAAGCGACAAAAGCAGCAGTGCGA GCAAAAATCAAGTAATAATAATCATCAATAAGCAGCTGTTTGCATTCGCG TGTTTTGAAGCTTAACAATGAGATTGGTCATCTTGGAAACCAGCGACTCG GTGGGCAAGTGGGCGGCCAAATATGTGATGAAACGCATCAATGACTTTCA GCCGAGTGCCGACAGATACTTCGTTTTGGGCCTGCCCACGGGATCTACGC CATTGGGAATGTACAAAGAACTGATCGAGTTTCATAAGCAGGGCAAGGTA TCCTTTCAGTATGTGAAAACCTTCAATATGGATGAGTATGTGGGACTGGC CAGAGATCACCATGAGAGCTATCACTACTTCATGTGGAACAACTTCTTCA AGCACATCGACATTGAGCCCAAGAATGTGCACATTTTGGATGGCAATGCA GCTGATCTGGTGGCCGAGTGCAATAAGTTCGAGGATCAGATCCGCGAGGC TGGAGGAGTGGAGCTGTTCATCGGTGGCATCGGACCCGATGGCCATATTG CCTTCAATGAGCCCGGCTCCTCATTGGTGTCCCGAACGCGGGTGAAAACT CTGGCGCAGGATACACTTGAAGCGAATGCCCGTTTCTTTGACAACGATAT GAGCAAGGTGCCCAAACAGGCTTTAACCGTGGGCGTTGGCACTGTGATGG ACTCCAAGGAGGTGATGATCCTCATCACCGGAGCTCACAAGGCATTTGCC CTGTACAAGGCCATCGAGGAGGGTGTGAATCACATGTGGACCGTCAGTGC CTTCCAGCAGCATGCAAATACCCTGATGATCTGCGACGAGGATGCCACTT TGGAGCTGAGAGTTAAGACCGTTAAATATTTCAAGGGCATTCTCAGAGAT CTAGACGAAGGCTCCCCACTGGAGGGCTACAAAAACTGATAATGCAGTCT GATGGACGTCCATTCCAAGCTGATAGAGCAACAAAAGACGACGTAACCCC AGATACTAAAGGGAATAATGGAGATCTGGATTCCATCGTTACCAGCATTA TAGTTTTTTCAATCAAAAGGAATCGAATTTTTATACAATAAATGAATTTT TATATGTTATCGCCTTAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Oscillin-RA | 1425 | Oscillin-RA | 120..1338 | 1..1219 | 6095 | 100 | Plus |
Oscillin-RB | 1638 | Oscillin-RB | 617..1627 | 209..1219 | 5055 | 100 | Plus |
Oscillin.d | 1365 | Oscillin.d | 120..1104 | 1..985 | 4925 | 100 | Plus |
Oscillin-RB | 1638 | Oscillin-RB | 14..223 | 1..210 | 1050 | 100 | Plus |
Oscillin.d | 1365 | Oscillin.d | 1105..1278 | 1046..1219 | 870 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 5547265..5547808 | 443..986 | 2720 | 100 | Plus |
chr2L | 23010047 | chr2L | 5546301..5546510 | 1..210 | 1050 | 100 | Plus |
chr2L | 23010047 | chr2L | 5548542..5548712 | 1046..1216 | 855 | 100 | Plus |
chr2L | 23010047 | chr2L | 5547069..5547199 | 314..444 | 655 | 100 | Plus |
chr2L | 23010047 | chr2L | 5546904..5547010 | 209..315 | 535 | 100 | Plus |
chr2L | 23010047 | chr2L | 5548113..5548174 | 984..1045 | 310 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 5548167..5548710 | 443..986 | 2720 | 100 | Plus |
2L | 23513712 | 2L | 5547203..5547412 | 1..210 | 1050 | 100 | Plus |
2L | 23513712 | 2L | 5549444..5549617 | 1046..1219 | 870 | 100 | Plus |
2L | 23513712 | 2L | 5547971..5548101 | 314..444 | 655 | 100 | Plus |
2L | 23513712 | 2L | 5547806..5547912 | 209..315 | 535 | 100 | Plus |
2L | 23513712 | 2L | 5549015..5549076 | 984..1045 | 310 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 5548167..5548710 | 443..986 | 2720 | 100 | Plus |
2L | 23513712 | 2L | 5547203..5547412 | 1..210 | 1050 | 100 | Plus |
2L | 23513712 | 2L | 5549444..5549617 | 1046..1219 | 870 | 100 | Plus |
2L | 23513712 | 2L | 5547971..5548101 | 314..444 | 655 | 100 | Plus |
2L | 23513712 | 2L | 5547806..5547912 | 209..315 | 535 | 100 | Plus |
2L | 23513712 | 2L | 5549015..5549076 | 984..1045 | 310 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 5546301..5546510 | 1..210 | 100 | -> | Plus |
chr2L | 5546906..5547010 | 211..315 | 100 | -> | Plus |
chr2L | 5547071..5547198 | 316..443 | 100 | -> | Plus |
chr2L | 5547266..5547807 | 444..985 | 100 | -> | Plus |
chr2L | 5548115..5548174 | 986..1045 | 100 | -> | Plus |
chr2L | 5548542..5548712 | 1046..1216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oscillin-RB | 1..822 | 218..1039 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oscillin-RB | 1..822 | 218..1039 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oscillin-RC | 1..822 | 218..1039 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oscillin-RB | 1..822 | 218..1039 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oscillin-RC | 1..822 | 218..1039 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oscillin-RA | 1..1216 | 1..1216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oscillin-RA | 1..1216 | 1..1216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oscillin-RA | 1..1216 | 1..1216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oscillin-RA | 1..1216 | 1..1216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oscillin-RA | 1..1216 | 1..1216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5547203..5547412 | 1..210 | 100 | -> | Plus |
2L | 5547808..5547912 | 211..315 | 100 | -> | Plus |
2L | 5547973..5548100 | 316..443 | 100 | -> | Plus |
2L | 5548168..5548709 | 444..985 | 100 | -> | Plus |
2L | 5549017..5549076 | 986..1045 | 100 | -> | Plus |
2L | 5549444..5549614 | 1046..1216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5547203..5547412 | 1..210 | 100 | -> | Plus |
2L | 5547808..5547912 | 211..315 | 100 | -> | Plus |
2L | 5547973..5548100 | 316..443 | 100 | -> | Plus |
2L | 5548168..5548709 | 444..985 | 100 | -> | Plus |
2L | 5549017..5549076 | 986..1045 | 100 | -> | Plus |
2L | 5549444..5549614 | 1046..1216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5547203..5547412 | 1..210 | 100 | -> | Plus |
2L | 5547808..5547912 | 211..315 | 100 | -> | Plus |
2L | 5547973..5548100 | 316..443 | 100 | -> | Plus |
2L | 5548168..5548709 | 444..985 | 100 | -> | Plus |
2L | 5549017..5549076 | 986..1045 | 100 | -> | Plus |
2L | 5549444..5549614 | 1046..1216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 5547973..5548100 | 316..443 | 100 | -> | Plus |
arm_2L | 5547203..5547412 | 1..210 | 100 | -> | Plus |
arm_2L | 5547808..5547912 | 211..315 | 100 | -> | Plus |
arm_2L | 5548168..5548709 | 444..985 | 100 | -> | Plus |
arm_2L | 5549017..5549076 | 986..1045 | 100 | -> | Plus |
arm_2L | 5549444..5549614 | 1046..1216 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5547203..5547412 | 1..210 | 100 | -> | Plus |
2L | 5547808..5547912 | 211..315 | 100 | -> | Plus |
2L | 5547973..5548100 | 316..443 | 100 | -> | Plus |
2L | 5548168..5548709 | 444..985 | 100 | -> | Plus |
2L | 5549017..5549076 | 986..1045 | 100 | -> | Plus |
2L | 5549444..5549614 | 1046..1216 | 100 | Plus |
Translation from 217 to 1038
> LP11234.hyp MRLVILETSDSVGKWAAKYVMKRINDFQPSADRYFVLGLPTGSTPLGMYK ELIEFHKQGKVSFQYVKTFNMDEYVGLARDHHESYHYFMWNNFFKHIDIE PKNVHILDGNAADLVAECNKFEDQIREAGGVELFIGGIGPDGHIAFNEPG SSLVSRTRVKTLAQDTLEANARFFDNDMSKVPKQALTVGVGTVMDSKEVM ILITGAHKAFALYKAIEEGVNHMWTVSAFQQHANTLMICDEDATLELRVK TVKYFKGILRDLDEGSPLEGYKN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Oscillin-PH | 273 | CG6957-PH | 1..273 | 1..273 | 1434 | 100 | Plus |
Oscillin-PF | 273 | CG6957-PF | 1..273 | 1..273 | 1434 | 100 | Plus |
Oscillin-PC | 273 | CG6957-PC | 1..273 | 1..273 | 1434 | 100 | Plus |
Oscillin-PB | 273 | CG6957-PB | 1..273 | 1..273 | 1434 | 100 | Plus |
Oscillin-PA | 273 | CG6957-PA | 1..273 | 1..273 | 1434 | 100 | Plus |
Translation from 217 to 1038
> LP11234.pep MRLVILETSDSVGKWAAKYVMKRINDFQPSADRYFVLGLPTGSTPLGMYK ELIEFHKQGKVSFQYVKTFNMDEYVGLARDHHESYHYFMWNNFFKHIDIE PKNVHILDGNAADLVAECNKFEDQIREAGGVELFIGGIGPDGHIAFNEPG SSLVSRTRVKTLAQDTLEANARFFDNDMSKVPKQALTVGVGTVMDSKEVM ILITGAHKAFALYKAIEEGVNHMWTVSAFQQHANTLMICDEDATLELRVK TVKYFKGILRDLDEGSPLEGYKN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15148-PA | 273 | GF15148-PA | 1..273 | 1..273 | 1402 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25080-PA | 273 | GG25080-PA | 1..273 | 1..273 | 1443 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10296-PA | 280 | GH10296-PA | 1..274 | 1..273 | 1308 | 88.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Oscillin-PH | 273 | CG6957-PH | 1..273 | 1..273 | 1434 | 100 | Plus |
Oscillin-PF | 273 | CG6957-PF | 1..273 | 1..273 | 1434 | 100 | Plus |
Oscillin-PC | 273 | CG6957-PC | 1..273 | 1..273 | 1434 | 100 | Plus |
Oscillin-PB | 273 | CG6957-PB | 1..273 | 1..273 | 1434 | 100 | Plus |
Oscillin-PA | 273 | CG6957-PA | 1..273 | 1..273 | 1434 | 100 | Plus |
Oscillin-PG | 272 | CG6957-PG | 1..259 | 1..259 | 1348 | 98.8 | Plus |
Oscillin-PD | 272 | CG6957-PD | 1..259 | 1..259 | 1348 | 98.8 | Plus |
Oscillin-PE | 266 | CG6957-PE | 1..256 | 1..256 | 1344 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17992-PA | 276 | GI17992-PA | 1..271 | 1..271 | 1320 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25853-PA | 274 | GL25853-PA | 1..274 | 1..273 | 1370 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19983-PA | 274 | GA19983-PA | 1..274 | 1..273 | 1374 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18555-PA | 273 | GM18555-PA | 1..273 | 1..273 | 1447 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23349-PA | 803 | GD23349-PA | 564..803 | 34..273 | 1290 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19587-PA | 278 | GJ19587-PA | 1..273 | 1..273 | 1305 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21107-PA | 273 | GK21107-PA | 1..273 | 1..273 | 1357 | 90.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25482-PA | 273 | GE25482-PA | 1..273 | 1..273 | 1459 | 98.9 | Plus |