BDGP Sequence Production Resources |
Search the DGRC for LP11415
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 114 |
Well: | 15 |
Vector: | pOT2 |
Associated Gene/Transcript | Sclp-RA |
Protein status: | LP11415.pep: gold |
Preliminary Size: | 1312 |
Sequenced Size: | 1120 |
Gene | Date | Evidence |
---|---|---|
CG2471 | 2001-01-01 | Release 2 assignment |
CG2471 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2471 | 2003-02-22 | Blastp of sequenced clone |
Sclp | 2008-04-29 | Release 5.5 accounting |
Sclp | 2008-08-15 | Release 5.9 accounting |
Sclp | 2008-12-18 | 5.12 accounting |
1120 bp (1120 high quality bases) assembled on 2003-02-22
GenBank Submission: AY061562
> LP11415.complete AGATAGTCACGTTCAGTTGGTTGCGAAGTAGCTCGCGTTTAAACAATCCA AATAATAGGAAAGATATATCTTGAACCAATCACACTTGCCACACTGATTG GAAATACAAAAACACACATATTTTTTTTCGAGTGATTACCCAGTGAGACA AAGCCAAATTAATATACCCACACCAAAGACTAGTTCAAATCAATCGAAAA CAAAAAAAAAACACAAAAGATGCGGCCTTTTGGCAACGACATAACAAACA TCCCGAACGGTGGTAATAATGGTGGTAATAATGGTGGTAATAATGGCAAC AACGATCCCAACGACGGCAACGACAACCGGAACACGAACATATCCAGTGA GGATCCCAGCGAGGAGTCCGGACTATCGGACGATCCGAGTATTCCGCCGC ATATAGCGAGAATCGGCGGAATCGTTACCTGCCCCCCGATCGCTGGACAA GGAGTTATCCGGGTGGTTCAGCGTTGCGAAGACGCCAAGGAGAACCACAA ACTGGATCTTTCAAGTTGTGAACTGATGCAAATACCAGATGCGGTATATC ATCTTATGCGAAACACAGAGTTGATCACCTGCAATCTCAGTGGCAATGTG CTCAAAAGCGTTTCGCCCAAGTTTTCGCAAAAGTTTAGTACCATCACAGA TCTTAATCTGTCACACAACAAACTGTCGAGGCTGCCAGAAGAATTCGCCA GCTTGTCTGCGCTAACCAAGCTGAATATCTCGAACAATTCATTTATCGTT TTGCCACAAGTAGTCTTTAAGCTTCAGAGTCTTGCCAGTCTGGATGCCCA GAACAATGCCATTTTGGAAATTGATACCGATGAGGCAATTACCAGTGACA ATTTGGCCCTCGTTGATCTTCGGAATAATCCGCTGAGCAGAAACTGCCGA CGAAAGCTGCAGAGCTTCAAGACCCCCTTCCACCTTGAGATCTCCAAGGA TGTCGAAGACGACTGGTAAACCGGATGAATGTCCTGTCCATTCATTTTCC AACACACCACAAACAAATCTCTCGTTATCTCGAAAGAGAGCGCCCTAAAC GGCCCTCCTTCAACTTATTTATTCTGTTTATAAATTTATATATATATTTA TCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 11815294..11815794 | 505..1 | 2415 | 99 | Minus |
chrX | 22417052 | chrX | 11812787..11813072 | 1102..817 | 1430 | 100 | Minus |
chrX | 22417052 | chrX | 11813137..11813307 | 817..647 | 840 | 99.4 | Minus |
chrX | 22417052 | chrX | 11813369..11813513 | 649..505 | 695 | 98.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 11924158..11924662 | 505..1 | 2525 | 100 | Minus |
X | 23542271 | X | 11921642..11921932 | 1107..817 | 1455 | 100 | Minus |
X | 23542271 | X | 11921998..11922168 | 817..647 | 855 | 100 | Minus |
X | 23542271 | X | 11922230..11922374 | 649..505 | 725 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 11932256..11932760 | 505..1 | 2525 | 100 | Minus |
X | 23527363 | X | 11929740..11930030 | 1107..817 | 1455 | 100 | Minus |
X | 23527363 | X | 11930096..11930266 | 817..647 | 855 | 100 | Minus |
X | 23527363 | X | 11930328..11930472 | 649..505 | 725 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 11812814..11813071 | 818..1075 | 100 | <- | Minus |
chrX | 11813137..11813304 | 650..817 | 99 | <- | Minus |
chrX | 11813369..11813512 | 506..649 | 98 | <- | Minus |
chrX | 11815294..11815794 | 1..505 | 91 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sclp-RA | 1..750 | 220..969 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sclp-RA | 1..750 | 220..969 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sclp-RA | 1..750 | 220..969 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sclp-RA | 1..750 | 220..969 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sclp-RA | 1..750 | 220..969 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sclp-RA | 1..1102 | 1..1102 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sclp-RA | 1..1102 | 1..1102 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sclp-RA | 1..1102 | 1..1102 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sclp-RA | 1..1102 | 1..1102 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sclp-RA | 1..1102 | 1..1102 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11922230..11922373 | 506..649 | 100 | <- | Minus |
X | 11921647..11921931 | 818..1102 | 100 | <- | Minus |
X | 11921998..11922165 | 650..817 | 100 | <- | Minus |
X | 11924158..11924662 | 1..505 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11922230..11922373 | 506..649 | 100 | <- | Minus |
X | 11921647..11921931 | 818..1102 | 100 | <- | Minus |
X | 11921998..11922165 | 650..817 | 100 | <- | Minus |
X | 11924158..11924662 | 1..505 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11922230..11922373 | 506..649 | 100 | <- | Minus |
X | 11921647..11921931 | 818..1102 | 100 | <- | Minus |
X | 11921998..11922165 | 650..817 | 100 | <- | Minus |
X | 11924158..11924662 | 1..505 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 11815680..11815964 | 818..1102 | 100 | <- | Minus |
arm_X | 11816031..11816198 | 650..817 | 100 | <- | Minus |
arm_X | 11816263..11816406 | 506..649 | 100 | <- | Minus |
arm_X | 11818191..11818695 | 1..505 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11929745..11930029 | 818..1102 | 100 | <- | Minus |
X | 11930096..11930263 | 650..817 | 100 | <- | Minus |
X | 11930328..11930471 | 506..649 | 100 | <- | Minus |
X | 11932256..11932760 | 1..505 | 100 | Minus |
Translation from 219 to 968
> LP11415.pep MRPFGNDITNIPNGGNNGGNNGGNNGNNDPNDGNDNRNTNISSEDPSEES GLSDDPSIPPHIARIGGIVTCPPIAGQGVIRVVQRCEDAKENHKLDLSSC ELMQIPDAVYHLMRNTELITCNLSGNVLKSVSPKFSQKFSTITDLNLSHN KLSRLPEEFASLSALTKLNISNNSFIVLPQVVFKLQSLASLDAQNNAILE IDTDEAITSDNLALVDLRNNPLSRNCRRKLQSFKTPFHLEISKDVEDDW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21583-PA | 247 | GF21583-PA | 1..247 | 1..249 | 852 | 65.4 | Plus |
Dana\GF18150-PA | 782 | GF18150-PA | 597..732 | 84..220 | 149 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18819-PA | 246 | GG18819-PA | 1..246 | 1..249 | 1226 | 95.2 | Plus |
Dere\GG16778-PA | 644 | GG16778-PA | 149..290 | 75..222 | 149 | 31.8 | Plus |
Dere\GG17029-PA | 873 | GG17029-PA | 699..823 | 93..220 | 146 | 39.2 | Plus |
Dere\GG22967-PA | 239 | GG22967-PA | 87..172 | 116..205 | 143 | 42.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11829-PA | 256 | GH11829-PA | 1..246 | 1..242 | 833 | 72.4 | Plus |
Dgri\GH14049-PA | 744 | GH14049-PA | 570..694 | 93..220 | 186 | 40.8 | Plus |
Dgri\GH21000-PA | 237 | GH21000-PA | 75..171 | 110..206 | 159 | 41.8 | Plus |
Dgri\GH14049-PA | 744 | GH14049-PA | 204..315 | 87..198 | 152 | 43.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sclp-PC | 339 | CG2471-PC | 1..249 | 1..249 | 1299 | 100 | Plus |
Sclp-PA | 249 | CG2471-PA | 1..249 | 1..249 | 1299 | 100 | Plus |
Sclp-PB | 175 | CG2471-PB | 5..175 | 79..249 | 828 | 95.3 | Plus |
f-cup-PE | 620 | CG9611-PE | 446..572 | 93..222 | 192 | 38.2 | Plus |
f-cup-PB | 650 | CG9611-PB | 476..602 | 93..222 | 192 | 38.2 | Plus |
f-cup-PA | 693 | CG9611-PA | 519..645 | 93..222 | 192 | 38.2 | Plus |
f-cup-PG | 759 | CG9611-PG | 585..711 | 93..222 | 192 | 38.2 | Plus |
f-cup-PF | 802 | CG9611-PF | 628..754 | 93..222 | 192 | 38.2 | Plus |
Sur-8-PF | 641 | CG5407-PF | 86..287 | 14..222 | 162 | 28 | Plus |
Sur-8-PB | 641 | CG5407-PB | 86..287 | 14..222 | 162 | 28 | Plus |
Sur-8-PA | 641 | CG5407-PA | 86..287 | 14..222 | 162 | 28 | Plus |
Sur-8-PE | 694 | CG5407-PE | 86..287 | 14..222 | 162 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14772-PA | 270 | GI14772-PA | 1..270 | 1..249 | 864 | 67.4 | Plus |
Dmoj\GI24424-PA | 694 | GI24424-PA | 520..644 | 93..220 | 178 | 39.5 | Plus |
Dmoj\GI14449-PA | 115 | GI14449-PA | 1..114 | 1..97 | 171 | 45.6 | Plus |
Dmoj\GI20638-PA | 237 | GI20638-PA | 70..170 | 105..205 | 145 | 38.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15850-PA | 249 | GL15850-PA | 1..249 | 1..249 | 784 | 63.5 | Plus |
Dper\GL15851-PA | 152 | GL15851-PA | 6..122 | 127..239 | 236 | 48.7 | Plus |
Dper\GL24452-PA | 655 | GL24452-PA | 481..605 | 93..220 | 153 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15374-PA | 249 | GA15374-PA | 1..249 | 1..249 | 768 | 62.2 | Plus |
Dpse\GA23495-PA | 200 | GA23495-PA | 13..172 | 82..239 | 339 | 46.9 | Plus |
Dpse\GA23498-PA | 199 | GA23498-PA | 13..172 | 82..239 | 336 | 46.9 | Plus |
Dpse\GA26616-PA | 655 | GA26616-PA | 481..605 | 93..220 | 157 | 40.8 | Plus |
Dpse\GA26616-PD | 616 | GA26616-PD | 442..566 | 93..220 | 157 | 40.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13238-PA | 249 | GM13238-PA | 1..249 | 1..249 | 1264 | 98 | Plus |
Dsec\GM15368-PA | 683 | GM15368-PA | 149..290 | 75..222 | 150 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15956-PA | 249 | GD15956-PA | 1..249 | 1..249 | 1264 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18740-PA | 243 | GJ18740-PA | 1..243 | 1..249 | 932 | 73.9 | Plus |
Dvir\GJ14282-PA | 750 | GJ14282-PA | 572..700 | 89..220 | 174 | 38.3 | Plus |
Dvir\GJ21606-PA | 237 | GJ21606-PA | 70..187 | 105..220 | 144 | 37 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10280-PA | 267 | GK10280-PA | 1..267 | 1..249 | 883 | 69.7 | Plus |
Dwil\GK13066-PA | 650 | GK13066-PA | 447..600 | 90..220 | 178 | 32.5 | Plus |
Dwil\GK19299-PA | 163 | GK19299-PA | 1..113 | 108..220 | 168 | 38.9 | Plus |
Dwil\GK19345-PA | 240 | GK19345-PA | 40..173 | 95..205 | 154 | 31.3 | Plus |
Dwil\GK13066-PA | 650 | GK13066-PA | 102..213 | 87..198 | 147 | 43.1 | Plus |
Translation from 219 to 968
> LP11415.hyp MRPFGNDITNIPNGGNNGGNNGGNNGNNDPNDGNDNRNTNISSEDPSEES GLSDDPSIPPHIARIGGIVTCPPIAGQGVIRVVQRCEDAKENHKLDLSSC ELMQIPDAVYHLMRNTELITCNLSGNVLKSVSPKFSQKFSTITDLNLSHN KLSRLPEEFASLSALTKLNISNNSFIVLPQVVFKLQSLASLDAQNNAILE IDTDEAITSDNLALVDLRNNPLSRNCRRKLQSFKTPFHLEISKDVEDDW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sclp-PA | 249 | CG2471-PA | 1..249 | 1..249 | 1299 | 100 | Plus |
Sclp-PC | 339 | CG2471-PC | 1..249 | 1..249 | 1299 | 100 | Plus |
Sclp-PB | 175 | CG2471-PB | 5..175 | 79..249 | 828 | 95.3 | Plus |
f-cup-PE | 620 | CG9611-PE | 446..572 | 93..222 | 192 | 38.2 | Plus |
f-cup-PB | 650 | CG9611-PB | 476..602 | 93..222 | 192 | 38.2 | Plus |