BDGP Sequence Production Resources |
Search the DGRC for LP11520
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 115 |
Well: | 20 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5447-RA |
Protein status: | LP11520.pep: gold |
Preliminary Size: | 1501 |
Sequenced Size: | 1439 |
Gene | Date | Evidence |
---|---|---|
CG5447 | 2001-01-01 | Release 2 assignment |
CG5447 | 2001-10-10 | Blastp of sequenced clone |
CG5447 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5447 | 2008-04-29 | Release 5.5 accounting |
1439 bp (1439 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061563
> LP11520.complete AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG AGAGAGAGAGAGAGAGAGAGAGAGAGGAATTTGAGGCAATTAGGGCATTC CTGTGAGCTTTTCCAGGCCAACTGCGATTACTTCAAGCCAAGACAAACAG CGACAACATGTCCCAAGGCGGTGGCACTACTCCAGCGGGCGGTAATCCCA CAGCGCTCCAGGCGACCGGAGGGGGCGTGGTCTTCAGCAAGGTCTTCATC CAGCGCGATTACAGCGAGGGCACCTCCGTCAAGTTCCATACACGGCTGCC CGCTGAGCTGGAGGGCATGATTGAAAGACACGTCTTCGAGGCCACCATCA ATAGGCTAAACGAGTTCTACGCCGAGGCGGAGGAGGGATCCTGCGGCACC TATTGCGAGGGCTGCATTGGCTGCATCACGGCCTACTTGATCTATATGTG CTCCGAAACGCACTATGAAAAGACCCTTCGCAAGATATCCAAATTTGTGG CTTCCCAAAATGAACGCATTTACAACACCAAGGGACTGCAGCTGATCGAT CCCACTTATCGGGGACTTCGCGTCATAGAGATTACAATATTCGATCGTCC GGGGCGAACGTGACTTCCGCTTTCCCATTCAGCCAACGAGTTTTTCATGT GAGATCGAGCAGCTACAGTCGCATCAACAGGCATGTGAAGGAGAAGAGTC CGTTTCAGCAATTATCAAGCAAAAGTCAGCGCCATCAGAGTGCGTTTCCA AAAATATAAATCAATAAAAAGCTGTGGAAGCAGCTAAAGCTTTATAACCT ATAACCATATGTCTTGGCAAAAGCAGTGGCCAGAGCGTTTTCGGGGCATG CGACTTAGTCACGGGTGTGCTGGTAGATGTGCCTCCGCTGCAGCCACATA CTGTATGCTAGATTAGCCGTTAATGATTAGCCAAGGCAGTGTACGGCCAG TTAGTTAGTATTTATGCAATAGCAGGCATAGTCATGTAAGTGAAAAGCTA CCGAAACTGCATTTTGAGCCGAAGCAAGAAGCATCAACATATACACACAT TCGCATATGTTACAATTGTTTTATTAATCGGACCGAAAGGCCAGCGAGAA TTGATTGTTTTGTAATTTGAAAATGAATAGAATTGTATACATCATGTTTG TAGTAGTTGCCAACAATTCGATTGTCTAATGTTGTAATTTCAATATGGCA TTAACATTTGCATAAATACACACACACATAGTTCAAGCTTAATCAGACAT AATGCATACGCATAACTTTTTCTATACAATACTTACCGATTTCAAACAGC GCCAAATGAACTTACACATAAATCGAATCGAGAATCGTTCGATATTTAAT ATAAATCAGCAACATTGATTAACATAGTTATATATCTTATAAGAAAAATA TATATATTGCCGTCATTTAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5447-RA | 1501 | CG5447-RA | 84..1430 | 75..1421 | 6735 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 22277002..22277596 | 813..1407 | 2975 | 100 | Plus |
chr3R | 27901430 | chr3R | 22276589..22276930 | 471..812 | 1710 | 100 | Plus |
chr3R | 27901430 | chr3R | 22275881..22276052 | 148..319 | 785 | 97.1 | Plus |
chr3R | 27901430 | chr3R | 22276118..22276271 | 319..472 | 770 | 100 | Plus |
chr3R | 27901430 | chr3R | 22275610..22275687 | 75..150 | 295 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 26453980..26454588 | 813..1421 | 3045 | 100 | Plus |
3R | 32079331 | 3R | 26453567..26453908 | 471..812 | 1710 | 100 | Plus |
3R | 32079331 | 3R | 26452851..26453022 | 148..319 | 860 | 100 | Plus |
3R | 32079331 | 3R | 26453088..26453241 | 319..472 | 770 | 100 | Plus |
3R | 32079331 | 3R | 26452582..26452657 | 75..150 | 380 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 26194811..26195419 | 813..1421 | 3045 | 100 | Plus |
3R | 31820162 | 3R | 26194398..26194739 | 471..812 | 1710 | 100 | Plus |
3R | 31820162 | 3R | 26193682..26193853 | 148..319 | 860 | 100 | Plus |
3R | 31820162 | 3R | 26193919..26194072 | 319..472 | 770 | 100 | Plus |
3R | 31820162 | 3R | 26193413..26193488 | 75..150 | 380 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\Newton | 1510 | Dbuz\Newton NEWTON 1510bp | 584..732 | 1126..1268 | 127 | 58.9 | Plus |
Dwil\Mar | 610 | Dwil\Mar MAR 610bp Derived from AF518731. | 257..320 | 1407..1344 | 122 | 65.6 | Minus |
copia | 5143 | copia DMCOPIA 5143bp Derived from X02599 (g7740) (Rel. 49, Last updated, Version 4). | 700..896 | 1272..1087 | 116 | 55.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 22275610..22275687 | 75..150 | 94 | -> | Plus |
chr3R | 22275884..22276052 | 151..319 | 97 | -> | Plus |
chr3R | 22276119..22276271 | 320..472 | 100 | -> | Plus |
chr3R | 22276591..22276930 | 473..812 | 100 | -> | Plus |
chr3R | 22277002..22277609 | 813..1418 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5447-RA | 1..456 | 158..613 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5447-RA | 1..456 | 158..613 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5447-RB | 1..495 | 158..652 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5447-RA | 1..456 | 158..613 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5447-RB | 1..495 | 158..652 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5447-RA | 50..1393 | 75..1418 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5447-RA | 49..1392 | 75..1418 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5447-RA | 49..1392 | 75..1418 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5447-RA | 50..1393 | 75..1418 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5447-RA | 49..1392 | 75..1418 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26452582..26452657 | 75..150 | 100 | -> | Plus |
3R | 26452854..26453022 | 151..319 | 100 | -> | Plus |
3R | 26453089..26453241 | 320..472 | 100 | -> | Plus |
3R | 26453569..26453908 | 473..812 | 100 | -> | Plus |
3R | 26453980..26454585 | 813..1418 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26452582..26452657 | 75..150 | 100 | -> | Plus |
3R | 26452854..26453022 | 151..319 | 100 | -> | Plus |
3R | 26453089..26453241 | 320..472 | 100 | -> | Plus |
3R | 26453569..26453908 | 473..812 | 100 | -> | Plus |
3R | 26453980..26454585 | 813..1418 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26452582..26452657 | 75..150 | 100 | -> | Plus |
3R | 26452854..26453022 | 151..319 | 100 | -> | Plus |
3R | 26453089..26453241 | 320..472 | 100 | -> | Plus |
3R | 26453569..26453908 | 473..812 | 100 | -> | Plus |
3R | 26453980..26454585 | 813..1418 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 22278304..22278379 | 75..150 | 100 | -> | Plus |
arm_3R | 22278576..22278744 | 151..319 | 100 | -> | Plus |
arm_3R | 22278811..22278963 | 320..472 | 100 | -> | Plus |
arm_3R | 22279291..22279630 | 473..812 | 100 | -> | Plus |
arm_3R | 22279702..22280307 | 813..1418 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26194400..26194739 | 473..812 | 100 | -> | Plus |
3R | 26194811..26195416 | 813..1418 | 100 | Plus | |
3R | 26193413..26193488 | 75..150 | 100 | -> | Plus |
3R | 26193685..26193853 | 151..319 | 100 | -> | Plus |
3R | 26193920..26194072 | 320..472 | 100 | -> | Plus |
Translation from 157 to 612
> LP11520.pep MSQGGGTTPAGGNPTALQATGGGVVFSKVFIQRDYSEGTSVKFHTRLPAE LEGMIERHVFEATINRLNEFYAEAEEGSCGTYCEGCIGCITAYLIYMCSE THYEKTLRKISKFVASQNERIYNTKGLQLIDPTYRGLRVIEITIFDRPGR T*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16123-PA | 178 | GF16123-PA | 40..178 | 13..151 | 714 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11479-PA | 177 | GG11479-PA | 27..177 | 1..151 | 789 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14188-PA | 148 | GH14188-PA | 1..148 | 1..151 | 689 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5447-PA | 151 | CG5447-PA | 1..151 | 1..151 | 797 | 100 | Plus |
CG5447-PB | 164 | CG5447-PB | 1..151 | 1..151 | 797 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22098-PA | 143 | GI22098-PA | 1..143 | 1..151 | 668 | 87.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23365-PA | 185 | GL23365-PA | 27..151 | 1..126 | 560 | 91.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18888-PA | 150 | GA18888-PA | 1..150 | 1..151 | 683 | 92.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10323-PA | 177 | GM10323-PA | 27..177 | 1..151 | 795 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21284-PA | 98 | GD21284-PA | 1..98 | 54..151 | 516 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24212-PA | 143 | GJ24212-PA | 1..143 | 1..151 | 677 | 88.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11740-PA | 150 | GK11740-PA | 1..150 | 1..151 | 726 | 91.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23670-PA | 177 | GE23670-PA | 27..177 | 1..151 | 796 | 98.7 | Plus |
Translation from 157 to 612
> LP11520.hyp MSQGGGTTPAGGNPTALQATGGGVVFSKVFIQRDYSEGTSVKFHTRLPAE LEGMIERHVFEATINRLNEFYAEAEEGSCGTYCEGCIGCITAYLIYMCSE THYEKTLRKISKFVASQNERIYNTKGLQLIDPTYRGLRVIEITIFDRPGR T*