Clone LP11571 Report

Search the DGRC for LP11571

Clone and Library Details

Library:LP
Tissue Source:Drosophila melanogaster larval-early pupal
Created by:Ling Hong
Date Registered:1998-06-11
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:115
Well:71
Vector:pOT2
Associated Gene/Transcriptfbl-RA
Protein status:LP11571.pep: gold
Sequenced Size:1917

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5725 2004-07-14 Blastp of sequenced clone
fbl 2008-04-29 Release 5.5 accounting
fbl 2008-08-15 Release 5.9 accounting
fbl 2008-12-18 5.12 accounting

Clone Sequence Records

LP11571.complete Sequence

1917 bp (1917 high quality bases) assembled on 2004-07-14

GenBank Submission: BT015256

> LP11571.complete
GTCGCACTTGCCTGTGGCGCCCGAGTGAAATGTTTCCGGTTTAGGCAAAC
CAACGTAGTATACAGGCGCACTGTGCTCGTAATGAACCCATAGCCATATA
CTGCCCGAAACGAAACCCAACGCAACGAATCGAATTGAAAGCGCCGTAGT
TCCGTGGAATATATACACCTCGACATACGCGCTGCCCGGGTCTCTGGGCT
GGGCTGGTCTGACTGACTGGAGAGTCAAATAAAATAAAACGCGTTTACCA
GTGATTACACGTCGGTGTTATGTGCAGCCGATTCTATAGTCGAGCGGAAT
AAACCAGCAGCGCCACAGCTCCAAGGGTTACACAATGCCGGAGGCGCTAC
ACTTTACATCGATCTTTGATCTCATCATCAAGAGCGCGATGCCATGGTTT
GGCATGGACATCGGCGGAACCCTCACCAAGCTGGTCTACTTCGAGCCCAA
GGACATAACGCCGGATGAGCAGGATCGCGAGGCTGGCATTTTGCGGAATA
TCCGACGCTACTTGACCAAAAACTCGGCGTACGGCAAAACCGGACATCGT
GATACGCACCTACAGATGGACAATGTCGAGATACGCAAAAGACGCGGCTC
CTTGCATTTCATTCGCTTCCAGACCACGGACATGGGCAACTTCCTATCGC
TTGCCAAGCAGAAGGGCATGGCCGAGCTGGTGACCACGGTTTGTGCCACC
GGCGGTGGCGCATTCAAGTTCGAGCAGGATTTCCGCGACCAAGTCAACAT
GAAGCTGGCTAAATTCGACGAGCTGGACACGCTCATCAAAGGCATTCTCT
TCGCCGATCTGCATAATCGCACGGAGTGCTACTACTACGAAAACGCACGT
GACATTCTAAAAAGCGAAAAGCAGCAGTTCAATTTCTCTCAACCGTTTCC
GTTTATTCTGGTGAACGTCGGATCCGGAGTCTCCATCCTGGCGGTCTACG
GTCCCGACAACTACAAGCGGATTTCGGGCACGAGCTTGGGCGGCGGTACA
TTCCTCGGCCTGTGTTGTCTACTCACCGGCTGCACATCCTTCGAAGAGGC
CATCCAACTGGCCACCAAGGGTGACAATAGGAAGGTGGACAAGTTAGTTA
AGGACATTTATGGTGGCGATTACAACCGCTTTGGTCTCCCCGGCGATTTG
GTGGCGTCAAGCTTTGGCCAGATGCATCTCAACGACAAACGGGTTTCCGT
ATCACGCGAAGATCTGGCCAACGCCACTCTGGTCACCATAACGAATAATA
TCGGCTCCATAGCAAGGATGTGCGCGCTGAATGAGAAGATCGATAGGGTC
GTCTTTGTGGGCAACTTTCTGCGAGTTAACCCCATTTCCATGAAGCTGCT
GGCGTACGCAATGGAGTTCTGGTCCAATGGCACAATGAAGGGTCTTTTCC
TGGAGCACGAGGGATACTTTGGGGCTCTGGGTTGCCTGCTGCAGTTCAAC
GGCGAGCTGGCAGCCGCCCTTAACGACGGAGTGGAGCATTCAATCCACAC
TGAATCCGATTCAGCAAGCGAAGCAGCACAGACATCTTCTACGGCGGACG
AGCCACCAGAAAAGGCGCCCACAAGCAAACACTCCACTAGATAGTCGCTA
TAACCACATGTTCCTCCCAAGGGCACCCAACGTGCGCCAGCCGATTGAAG
TGCATGTACAGTAGACCTAAGATCAATAAGGCAATGACAATGGCAATGGC
AATGACTTTGGTCCTTCGCAGTTCATCTCGGTATTTATCGTAATTCTTTC
TCGGCTTTAGTTGTAACTTGATGACGCACAAATTGTAAATGCATGAAATT
ACGTATGTATGGATAAAGTGCCTGCTAGAAAGCAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAA

LP11571.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:00:10
Subject Length Description Subject Range Query Range Score Percent Strand
fbl-RA 2246 fbl-RA 133..1967 1..1835 9175 100 Plus
fbl.g 2458 fbl.g 133..1967 1..1835 9175 100 Plus
fbl.d 1549 fbl.d 68..1518 385..1835 7255 100 Plus
fbl.d 1549 fbl.d 1..42 345..386 210 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:30:41
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 20379942..20380478 1297..1833 2685 100 Plus
chr3L 24539361 chr3L 20376675..20377058 1..386 1865 99.5 Plus
chr3L 24539361 chr3L 20378970..20379265 563..858 1480 100 Plus
chr3L 24539361 chr3L 20377725..20377904 386..565 900 100 Plus
chr3L 24539361 chr3L 20379513..20379691 983..1161 895 100 Plus
chr3L 24539361 chr3L 20379745..20379884 1160..1299 685 99.3 Plus
chr3L 24539361 chr3L 20379325..20379450 859..984 630 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:55:32 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:30:40
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20390885..20391423 1297..1835 2695 100 Plus
3L 28110227 3L 20387616..20388001 1..386 1930 100 Plus
3L 28110227 3L 20389913..20390208 563..858 1480 100 Plus
3L 28110227 3L 20388668..20388847 386..565 900 100 Plus
3L 28110227 3L 20390456..20390634 983..1161 895 100 Plus
3L 28110227 3L 20390688..20390827 1160..1299 700 100 Plus
3L 28110227 3L 20390268..20390393 859..984 630 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:48:42
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 20383985..20384523 1297..1835 2695 100 Plus
3L 28103327 3L 20380716..20381101 1..386 1930 100 Plus
3L 28103327 3L 20383013..20383308 563..858 1480 100 Plus
3L 28103327 3L 20381768..20381947 386..565 900 100 Plus
3L 28103327 3L 20383556..20383734 983..1161 895 100 Plus
3L 28103327 3L 20383788..20383927 1160..1299 700 100 Plus
3L 28103327 3L 20383368..20383493 859..984 630 100 Plus
Blast to na_te.dros performed on 2019-03-16 11:30:40 has no hits.

LP11571.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:31:42 Download gff for LP11571.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 20376675..20377058 1..386 99 -> Plus
chr3L 20377726..20377904 387..565 100 -> Plus
chr3L 20378973..20379265 566..858 100 -> Plus
chr3L 20379325..20379450 859..984 100 -> Plus
chr3L 20379515..20379691 985..1161 100 -> Plus
chr3L 20379747..20379882 1162..1297 99 -> Plus
chr3L 20379943..20380478 1298..1833 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:41:32 Download gff for LP11571.complete
Subject Subject Range Query Range Percent Splice Strand
fbl-RA 1..1260 335..1594 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:34:45 Download gff for LP11571.complete
Subject Subject Range Query Range Percent Splice Strand
fbl-RA 1..1260 335..1594 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 13:41:15 Download gff for LP11571.complete
Subject Subject Range Query Range Percent Splice Strand
fbl-RA 1..1260 335..1594 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:18:39 Download gff for LP11571.complete
Subject Subject Range Query Range Percent Splice Strand
fbl-RA 1..1260 335..1594 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:19:14 Download gff for LP11571.complete
Subject Subject Range Query Range Percent Splice Strand
fbl-RA 1..1260 335..1594 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:41:12 Download gff for LP11571.complete
Subject Subject Range Query Range Percent Splice Strand
fbl-RA 1..1833 1..1833 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:34:45 Download gff for LP11571.complete
Subject Subject Range Query Range Percent Splice Strand
fbl-RA 1..1833 1..1833 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:41:15 Download gff for LP11571.complete
Subject Subject Range Query Range Percent Splice Strand
fbl-RA 1..1833 1..1833 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:18:39 Download gff for LP11571.complete
Subject Subject Range Query Range Percent Splice Strand
fbl-RA 1..1833 1..1833 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:19:14 Download gff for LP11571.complete
Subject Subject Range Query Range Percent Splice Strand
fbl-RA 1..1833 1..1833 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:31:42 Download gff for LP11571.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20390886..20391421 1298..1833 100   Plus
3L 20387616..20388001 1..386 100 -> Plus
3L 20388669..20388847 387..565 100 -> Plus
3L 20389916..20390208 566..858 100 -> Plus
3L 20390268..20390393 859..984 100 -> Plus
3L 20390458..20390634 985..1161 100 -> Plus
3L 20390690..20390825 1162..1297 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:31:42 Download gff for LP11571.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20390886..20391421 1298..1833 100   Plus
3L 20387616..20388001 1..386 100 -> Plus
3L 20388669..20388847 387..565 100 -> Plus
3L 20389916..20390208 566..858 100 -> Plus
3L 20390268..20390393 859..984 100 -> Plus
3L 20390458..20390634 985..1161 100 -> Plus
3L 20390690..20390825 1162..1297 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:31:42 Download gff for LP11571.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20390886..20391421 1298..1833 100   Plus
3L 20387616..20388001 1..386 100 -> Plus
3L 20388669..20388847 387..565 100 -> Plus
3L 20389916..20390208 566..858 100 -> Plus
3L 20390268..20390393 859..984 100 -> Plus
3L 20390458..20390634 985..1161 100 -> Plus
3L 20390690..20390825 1162..1297 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:41:15 Download gff for LP11571.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20380716..20381101 1..386 100 -> Plus
arm_3L 20381769..20381947 387..565 100 -> Plus
arm_3L 20383016..20383308 566..858 100 -> Plus
arm_3L 20383368..20383493 859..984 100 -> Plus
arm_3L 20383558..20383734 985..1161 100 -> Plus
arm_3L 20383790..20383925 1162..1297 100 -> Plus
arm_3L 20383986..20384521 1298..1833 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:55:48 Download gff for LP11571.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20380716..20381101 1..386 100 -> Plus
3L 20381769..20381947 387..565 100 -> Plus
3L 20383016..20383308 566..858 100 -> Plus
3L 20383368..20383493 859..984 100 -> Plus
3L 20383558..20383734 985..1161 100 -> Plus
3L 20383790..20383925 1162..1297 100 -> Plus
3L 20383986..20384521 1298..1833 100   Plus

LP11571.pep Sequence

Translation from 334 to 1593

> LP11571.pep
MPEALHFTSIFDLIIKSAMPWFGMDIGGTLTKLVYFEPKDITPDEQDREA
GILRNIRRYLTKNSAYGKTGHRDTHLQMDNVEIRKRRGSLHFIRFQTTDM
GNFLSLAKQKGMAELVTTVCATGGGAFKFEQDFRDQVNMKLAKFDELDTL
IKGILFADLHNRTECYYYENARDILKSEKQQFNFSQPFPFILVNVGSGVS
ILAVYGPDNYKRISGTSLGGGTFLGLCCLLTGCTSFEEAIQLATKGDNRK
VDKLVKDIYGGDYNRFGLPGDLVASSFGQMHLNDKRVSVSREDLANATLV
TITNNIGSIARMCALNEKIDRVVFVGNFLRVNPISMKLLAYAMEFWSNGT
MKGLFLEHEGYFGALGCLLQFNGELAAALNDGVEHSIHTESDSASEAAQT
SSTADEPPEKAPTSKHSTR*

LP11571.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 19:02:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10336-PA 529 GF10336-PA 128..529 18..419 2019 93.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 19:02:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16111-PA 512 GG16111-PA 112..512 18..419 2097 97 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 19:02:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16974-PA 531 GH16974-PA 109..516 1..412 1937 87.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:28:01
Subject Length Description Subject Range Query Range Score Percent Strand
fbl-PA 419 CG5725-PA 1..419 1..419 2182 100 Plus
fbl-PG 428 CG5725-PG 1..428 1..419 2162 97.9 Plus
fbl-PB 417 CG5725-PB 16..417 18..419 2097 100 Plus
fbl-PE 512 CG5725-PE 111..512 18..419 2094 99.8 Plus
fbl-PC 401 CG5725-PC 1..401 19..419 2093 100 Plus
fbl-PD 401 CG5725-PD 1..401 19..419 2093 100 Plus
fbl-PF 342 CG5725-PF 1..342 78..419 1772 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 19:02:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11839-PA 523 GI11839-PA 111..522 4..413 1921 87.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 19:02:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11882-PA 537 GL11882-PA 127..537 18..419 2006 91.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 19:02:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19085-PA 537 GA19085-PA 127..537 18..419 2007 91.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 19:02:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22287-PA 512 GM22287-PA 111..512 18..419 2154 99 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 19:02:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14883-PA 512 GD14883-PA 111..512 18..419 2156 99.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 19:02:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13538-PA 528 GJ13538-PA 112..526 1..418 1946 87.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 19:02:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16961-PA 519 GK16961-PA 117..519 18..415 1952 90.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 19:02:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\fbl-PA 418 GE19678-PA 1..418 1..419 2208 98.3 Plus
Dyak\GE19675-PA 504 GE19675-PA 109..467 18..376 1933 99.4 Plus

LP11571.hyp Sequence

Translation from 334 to 1593

> LP11571.hyp
MPEALHFTSIFDLIIKSAMPWFGMDIGGTLTKLVYFEPKDITPDEQDREA
GILRNIRRYLTKNSAYGKTGHRDTHLQMDNVEIRKRRGSLHFIRFQTTDM
GNFLSLAKQKGMAELVTTVCATGGGAFKFEQDFRDQVNMKLAKFDELDTL
IKGILFADLHNRTECYYYENARDILKSEKQQFNFSQPFPFILVNVGSGVS
ILAVYGPDNYKRISGTSLGGGTFLGLCCLLTGCTSFEEAIQLATKGDNRK
VDKLVKDIYGGDYNRFGLPGDLVASSFGQMHLNDKRVSVSREDLANATLV
TITNNIGSIARMCALNEKIDRVVFVGNFLRVNPISMKLLAYAMEFWSNGT
MKGLFLEHEGYFGALGCLLQFNGELAAALNDGVEHSIHTESDSASEAAQT
SSTADEPPEKAPTSKHSTR*

LP11571.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:42:05
Subject Length Description Subject Range Query Range Score Percent Strand
fbl-PA 419 CG5725-PA 1..419 1..419 2182 100 Plus
fbl-PG 428 CG5725-PG 1..428 1..419 2162 97.9 Plus
fbl-PB 417 CG5725-PB 16..417 18..419 2097 100 Plus
fbl-PC 401 CG5725-PC 1..401 19..419 2093 100 Plus
fbl-PD 401 CG5725-PD 1..401 19..419 2093 100 Plus