BDGP Sequence Production Resources |
Search the DGRC for LP11958
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 119 |
Well: | 58 |
Vector: | pOT2 |
Associated Gene/Transcript | CREG-RC |
Protein status: | LP11958.pep: gold |
Sequenced Size: | 810 |
Gene | Date | Evidence |
---|---|---|
CG5413 | 2002-10-31 | Blastp of sequenced clone |
CG5413 | 2003-01-01 | Sim4 clustering to Release 3 |
CREG | 2008-04-29 | Release 5.5 accounting |
CREG | 2008-08-15 | Release 5.9 accounting |
CREG | 2008-12-18 | 5.12 accounting |
810 bp (810 high quality bases) assembled on 2002-10-31
GenBank Submission: BT001520
> LP11958.complete TTGCAGTCTAGCCATGAAAACCTTTCACTCCCTACTATTCGCCCTGATTT TGGCCCTCGTGAGCCTGGACCCCTCTTCCGGTTACTCCCGCCGGAAAGAT GAGCGTATAATTAGAGAATATAAGCGAGAGCAAGAGTTAAATCACGCCAA GATCGCCAGAGATTTGGTCCATCGCGCCAATTGGGCGGCTGTGGGAAGTC TCTCCACCAACGAACGGGTGAAGGGGTATCCCATGGTCAACATTATCTCC ATCGACGACAGCGATGCTAATAACAGGTCCACTGGACGTATTCGATTCCT GCTAACCGATTTGGACTTCACTGGTCCCGACTGGCAGAAGGACAACAAGG TCACACTCCTGTTCAGTGACGAGCAGACCCTAAGATGCAAGGAGGGCGGA AAGGATCCCATGGAGCCTACATGTGCCCGTTCCATGATCAGTGGACAGGT GAAGAAGCTCACAATTTCTACCTTTGCGAACTGGAAATTAGCAATATCTT TGTTCTGGACTTCTATGGAGGTCCTCATAAAGTGAGCGCCTCTGACTATT ACGCTGTTTCGAATTGATGAACTCCTCCAAAAGCAATCCAACTGACGCCT CATATACTTTGTCAAAAAATGAAATGATAAGCATATTTGCACAACATGTC TGCCACAAAGGGAAAGAATGAAGACAAAGGCCTTTATGAAAGCCACTTAT CAGTTGAGCTCTGTGATTTCAATCGATAGAACAATAACTTTGATATAAAT AAAAATACATTCCGTTGAATGTACTCTGACATACTGAAAAAAAAAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CREG-RC | 929 | CREG-RC | 98..886 | 1..789 | 3945 | 100 | Plus |
CREG-RA | 1041 | CREG-RA | 128..584 | 1..457 | 2285 | 100 | Plus |
CREG-RB | 1154 | CREG-RB | 248..701 | 4..457 | 2270 | 100 | Plus |
CREG-RA | 1041 | CREG-RA | 664..998 | 455..789 | 1675 | 100 | Plus |
CREG-RB | 1154 | CREG-RB | 781..1115 | 455..789 | 1675 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 13217645..13217972 | 458..786 | 98 | <- | Minus |
chr3R | 13218188..13218644 | 1..457 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CREG-RC | 1..522 | 14..535 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CREG-RC | 1..522 | 14..535 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CREG-RC | 1..522 | 14..535 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CREG-RC | 1..522 | 14..535 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CREG-RC | 1..522 | 14..535 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CREG-RC | 11..796 | 1..786 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CREG-RC | 11..796 | 1..786 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CREG-RC | 38..823 | 1..786 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CREG-RC | 11..796 | 1..786 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CREG-RC | 38..823 | 1..786 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17393272..17393600 | 458..786 | 100 | <- | Minus |
3R | 17393816..17394272 | 1..457 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17393272..17393600 | 458..786 | 100 | <- | Minus |
3R | 17393816..17394272 | 1..457 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17393272..17393600 | 458..786 | 100 | <- | Minus |
3R | 17393816..17394272 | 1..457 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 13218994..13219322 | 458..786 | 100 | <- | Minus |
arm_3R | 13219538..13219994 | 1..457 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17134103..17134431 | 458..786 | 100 | <- | Minus |
3R | 17134647..17135103 | 1..457 | 100 | Minus |
Translation from 0 to 534
> LP11958.hyp CSLAMKTFHSLLFALILALVSLDPSSGYSRRKDERIIREYKREQELNHAK IARDLVHRANWAAVGSLSTNERVKGYPMVNIISIDDSDANNRSTGRIRFL LTDLDFTGPDWQKDNKVTLLFSDEQTLRCKEGGKDPMEPTCARSMISGQV KKLTISTFANWKLAISLFWTSMEVLIK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CREG-PC | 173 | CG5413-PC | 1..173 | 5..177 | 891 | 100 | Plus |
CREG-PD | 211 | CG5413-PD | 1..149 | 5..153 | 766 | 99.3 | Plus |
CREG-PB | 211 | CG5413-PB | 1..149 | 5..153 | 766 | 99.3 | Plus |
CREG-PA | 211 | CG5413-PA | 1..149 | 5..153 | 766 | 99.3 | Plus |
Translation from 13 to 534
> LP11958.pep MKTFHSLLFALILALVSLDPSSGYSRRKDERIIREYKREQELNHAKIARD LVHRANWAAVGSLSTNERVKGYPMVNIISIDDSDANNRSTGRIRFLLTDL DFTGPDWQKDNKVTLLFSDEQTLRCKEGGKDPMEPTCARSMISGQVKKLT ISTFANWKLAISLFWTSMEVLIK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16884-PA | 211 | GF16884-PA | 7..150 | 7..150 | 602 | 75.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16779-PA | 211 | GG16779-PA | 1..152 | 1..152 | 650 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17497-PA | 212 | GH17497-PA | 10..150 | 7..149 | 512 | 67.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CREG-PC | 173 | CG5413-PC | 1..173 | 1..173 | 891 | 100 | Plus |
CREG-PD | 211 | CG5413-PD | 1..149 | 1..149 | 766 | 99.3 | Plus |
CREG-PB | 211 | CG5413-PB | 1..149 | 1..149 | 766 | 99.3 | Plus |
CREG-PA | 211 | CG5413-PA | 1..149 | 1..149 | 766 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22825-PA | 207 | GI22825-PA | 3..145 | 7..149 | 530 | 67.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23943-PA | 211 | GL23943-PA | 21..149 | 21..149 | 561 | 78.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18865-PA | 211 | GA18865-PA | 1..149 | 1..149 | 589 | 71.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15369-PA | 211 | GM15369-PA | 1..152 | 1..152 | 698 | 90.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20237-PA | 211 | GD20237-PA | 1..152 | 1..152 | 699 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22827-PA | 211 | GJ22827-PA | 8..149 | 8..149 | 540 | 70.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11455-PA | 215 | GK11455-PA | 14..167 | 11..164 | 560 | 66.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24171-PA | 211 | GE24171-PA | 23..152 | 23..152 | 657 | 92.3 | Plus |