Clone LP12178 Report

Search the DGRC for LP12178

Clone and Library Details

Library:LP
Tissue Source:Drosophila melanogaster larval-early pupal
Created by:Ling Hong
Date Registered:1998-06-11
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:121
Well:78
Vector:pOT2
Associated Gene/TranscriptCG8172-RD
Protein status:LP12178.pep: gold
Preliminary Size:2049
Sequenced Size:1798

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8172 2002-01-01 Sim4 clustering to Release 2
CG8172 2002-05-18 Blastp of sequenced clone
CG8172 2003-01-01 Sim4 clustering to Release 3
CG8172 2008-04-29 Release 5.5 accounting
CG8172 2008-08-15 Release 5.9 accounting
CG8172 2008-12-18 5.12 accounting

Clone Sequence Records

LP12178.complete Sequence

1798 bp (1798 high quality bases) assembled on 2002-05-18

GenBank Submission: AY119095

> LP12178.complete
ACGGCACAGTGTTCGCGAACTGCGGATGCATTTGGACGGCGCGAGACCGC
AGAAAGCGAAGTGTAAAATATTAAAGATACGCTCTAAATTATCGCCAGGC
CTGCACGACCAGAAGTGAAGAAGTGTACGGTGGAGAAAATTGTGGACTTT
ATTCCGTTTACCAGGGCGGGCCCAACACTGCACATCGGCCTGCTATGCAA
ACGAGGCGCGATTATTCAATCAAAAACTCGCGCCGCTACGTGAATTAAGT
GAAACACAATTGCAGAAATCAGTGACAGACGCGGCAACAACAAGTGTACA
CAACAAAAAGTACGAAAGTATTGCAAAATGCGCCCGCCGCAGCAACTGCT
CGTGTTGCTGCTTGCAACAGTGGCCGCAGCTGGCCACAGCAGCTACAATT
CGGTTTACAACGAGGTGATCCCGCCGAAGCTGAAGCAGGCCATCGACCAG
GAGCTGCCCAAGGAGGCCAAGTTCTTCGATGAGCTGGACTTGATACCGCA
GTCGTGCCGCTTTCGTGGCCACAAGTTCGAGTGCGGCCTGTCCATCTCCT
GTGTCTTGGGCGGCGGCAAGCCGCTGGATCTTTGCTCTGGCGGCATGATC
TGGTCTTGTTGCGTGGACAAAGATCTCGACGCCGAGGAGAGTCCGCACGC
CGCCCCGGTGAACAACACGAGCTGCGGCGAGGTCTACACCCGATCCAATC
GCATTGTAGGAGGACATTCCACGGGCTTTGGCTCTCATCCCTGGCAGGTG
GCGCTGATCAAAAGTGGGTTCCTCACTAGGAAACTCAGCTGCGGCGGTGC
ACTGATCTCCAATCGATGGGTGATAACGGCTGCCCATTGTGTGGCTTCCA
CTCCAAACTCCAATATGAAAATCCGATTGGGCGAGTGGGATGTTCGTGGT
CAGGAGGAGCGCCTAAACCACGAAGAGTATGGCATCGAGCGAAAGGAAGT
GCATCCCCATTACAATCCGGCAGACTTTGTAAATGACGTGGCTCTGATCC
GCTTGGACAGGAATGTGGTCTACAAGCAGCACATCATACCCGTCTGTCTG
CCTCCTTCCACCACCAAATTGACTGGTAAAATGGCCACTGTGGCTGGGTG
GGGGCGAACCCGACACGGCCAGAGCACAGTTCCCTCCGTACTGCAGGAGG
TGGACGTGGAGGTGATCTCGAATGATCGCTGTCAGCGATGGTTCCGGGCA
GCGGGTCGCCGAGAGGCCATCCACGATGTCTTCTTGTGCGCAGGCTACAA
GGATGGCGGCCGGGATTCGTGTCAGGGCGACAGTGGTGGTCCACTAACAT
TGACCATGGACGGTCGCAAGACCCTGATCGGATTGGTGTCCTGGGGCATT
GGCTGTGGGAGGGAACACCTGCCCGGCGTCTATACGAACATCCAGCGTTT
CGTGCCCTGGATCAACAAGGTTATGGCCAATGACAACGCGTAGGCGCCAA
CGCGCAGGTGTGCGTCCGCTGCGGAGATGCATGCCGTCAGCCAGGCCATG
TGATTCCTCTACGACTCGGGGTTGCTAGTGTGTAAGACCGAGGTCCTTGG
GGCCTTGTATTTATTTTATCATACTCCACATCCTAGGGTTCCTCGACTCA
ATCAGTCCAACCGTTCGATCCCTCCACCCTTCATTCGACTTCATTGCATT
CCACGCATTCTATTTAAGTTTTCTATATTTATTAAACACTGTTCGAATAA
TTCCTACATTTGCGATCCACTTTCACTGACATCGTATTGATACCAATAAT
TATGTTTTAAAAATAAAAACAAAATGTACCAAAAAAAAAAAAAAAAAA

LP12178.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:01:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG8172-RD 1835 CG8172-RD 53..1835 1..1783 8915 100 Plus
CG8172-RF 2371 CG8172-RF 1255..2368 671..1784 5570 100 Plus
CG8172-RE 2351 CG8172-RE 1239..2351 671..1783 5565 100 Plus
CG8172-RE 2351 CG8172-RE 47..718 1..672 3360 100 Plus
CG8172-RF 2371 CG8172-RF 553..734 491..672 910 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:59:10
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 4894777..4895329 1780..1228 2765 100 Minus
chr2R 21145070 chr2R 4900564..4901053 490..1 2405 99.4 Minus
chr2R 21145070 chr2R 4895412..4895792 1229..849 1905 100 Minus
chr2R 21145070 chr2R 4898785..4898965 671..491 905 100 Minus
chr2R 21145070 chr2R 4895861..4896038 848..671 890 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:55:56 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:59:08
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9007230..9007786 1784..1228 2785 100 Minus
2R 25286936 2R 9013019..9013508 490..1 2450 100 Minus
2R 25286936 2R 9007869..9008249 1229..849 1905 100 Minus
2R 25286936 2R 9011236..9011416 671..491 905 100 Minus
2R 25286936 2R 9008318..9008495 848..671 890 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:32:53
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 9008429..9008985 1784..1228 2785 100 Minus
2R 25260384 2R 9014218..9014707 490..1 2450 100 Minus
2R 25260384 2R 9009068..9009448 1229..849 1905 100 Minus
2R 25260384 2R 9012435..9012615 671..491 905 100 Minus
2R 25260384 2R 9009517..9009694 848..671 890 100 Minus
Blast to na_te.dros performed on 2019-03-16 02:59:09 has no hits.

LP12178.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:59:53 Download gff for LP12178.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 4894777..4895329 1228..1780 100 <- Minus
chr2R 4895414..4895792 849..1227 100 <- Minus
chr2R 4895861..4896038 671..848 100 <- Minus
chr2R 4898786..4898965 491..670 100 <- Minus
chr2R 4900564..4901053 1..490 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:41:53 Download gff for LP12178.complete
Subject Subject Range Query Range Percent Splice Strand
CG8172-RC 985..1200 1228..1443 100   Plus
CG8172-RC 1..900 328..1227 100 -> Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:41:29 Download gff for LP12178.complete
Subject Subject Range Query Range Percent Splice Strand
CG8172-RD 1..1116 328..1443 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:41:31 Download gff for LP12178.complete
Subject Subject Range Query Range Percent Splice Strand
CG8172-RD 1..1116 328..1443 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:33:35 Download gff for LP12178.complete
Subject Subject Range Query Range Percent Splice Strand
CG8172-RC 1..900 328..1227 100 -> Plus
CG8172-RC 985..1200 1228..1443 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:27:58 Download gff for LP12178.complete
Subject Subject Range Query Range Percent Splice Strand
CG8172-RD 1..1116 328..1443 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:15:31 Download gff for LP12178.complete
Subject Subject Range Query Range Percent Splice Strand
CG8172-RC 1..1227 1..1227 100 -> Plus
CG8172-RC 1312..1864 1228..1780 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:41:29 Download gff for LP12178.complete
Subject Subject Range Query Range Percent Splice Strand
CG8172-RD 1..1780 1..1780 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:41:31 Download gff for LP12178.complete
Subject Subject Range Query Range Percent Splice Strand
CG8172-RD 19..1798 1..1780 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:33:36 Download gff for LP12178.complete
Subject Subject Range Query Range Percent Splice Strand
CG8172-RC 1..1227 1..1227 100 -> Plus
CG8172-RC 1312..1864 1228..1780 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:27:58 Download gff for LP12178.complete
Subject Subject Range Query Range Percent Splice Strand
CG8172-RD 19..1798 1..1780 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:59:53 Download gff for LP12178.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9007234..9007786 1228..1780 100 <- Minus
2R 9007871..9008249 849..1227 100 <- Minus
2R 9008318..9008495 671..848 100 <- Minus
2R 9011237..9011416 491..670 100 <- Minus
2R 9013019..9013508 1..490 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:59:53 Download gff for LP12178.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9007234..9007786 1228..1780 100 <- Minus
2R 9007871..9008249 849..1227 100 <- Minus
2R 9008318..9008495 671..848 100 <- Minus
2R 9011237..9011416 491..670 100 <- Minus
2R 9013019..9013508 1..490 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:59:53 Download gff for LP12178.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9007234..9007786 1228..1780 100 <- Minus
2R 9007871..9008249 849..1227 100 <- Minus
2R 9008318..9008495 671..848 100 <- Minus
2R 9011237..9011416 491..670 100 <- Minus
2R 9013019..9013508 1..490 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:41:31 Download gff for LP12178.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4894739..4895291 1228..1780 100 <- Minus
arm_2R 4895376..4895754 849..1227 100 <- Minus
arm_2R 4895823..4896000 671..848 100 <- Minus
arm_2R 4898742..4898921 491..670 100 <- Minus
arm_2R 4900524..4901013 1..490 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:05:54 Download gff for LP12178.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9012436..9012615 491..670 100 <- Minus
2R 9014218..9014707 1..490 100   Minus
2R 9008433..9008985 1228..1780 100 <- Minus
2R 9009070..9009448 849..1227 100 <- Minus
2R 9009517..9009694 671..848 100 <- Minus

LP12178.pep Sequence

Translation from 327 to 1442

> LP12178.pep
MRPPQQLLVLLLATVAAAGHSSYNSVYNEVIPPKLKQAIDQELPKEAKFF
DELDLIPQSCRFRGHKFECGLSISCVLGGGKPLDLCSGGMIWSCCVDKDL
DAEESPHAAPVNNTSCGEVYTRSNRIVGGHSTGFGSHPWQVALIKSGFLT
RKLSCGGALISNRWVITAAHCVASTPNSNMKIRLGEWDVRGQEERLNHEE
YGIERKEVHPHYNPADFVNDVALIRLDRNVVYKQHIIPVCLPPSTTKLTG
KMATVAGWGRTRHGQSTVPSVLQEVDVEVISNDRCQRWFRAAGRREAIHD
VFLCAGYKDGGRDSCQGDSGGPLTLTMDGRKTLIGLVSWGIGCGREHLPG
VYTNIQRFVPWINKVMANDNA*

LP12178.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 04:34:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12720-PA 554 GF12720-PA 298..552 116..370 1348 96.9 Plus
Dana\GF16156-PA 964 GF16156-PA 719..959 124..362 622 49.2 Plus
Dana\GF12724-PA 1594 GF12724-PA 1322..1590 99..365 574 45 Plus
Dana\GF12723-PA 250 GF12723-PA 6..248 125..366 573 45.9 Plus
Dana\GF12720-PA 554 GF12720-PA 11..124 4..115 542 89.5 Plus
Dana\GF12718-PA 839 GF12718-PA 495..833 44..366 537 38 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 04:34:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10597-PA 544 GG10597-PA 289..544 116..371 1383 99.2 Plus
Dere\GG16980-PA 782 GG16980-PA 537..777 124..362 621 49.2 Plus
Dere\GG10597-PA 544 GG10597-PA 1..115 1..115 600 97.4 Plus
Dere\GG10601-PA 1637 GG10601-PA 1382..1633 116..365 574 46.5 Plus
Dere\GG10599-PA 250 GG10599-PA 6..248 125..366 567 45.5 Plus
Dere\GG10595-PA 855 GG10595-PA 511..849 44..366 536 38 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 04:34:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20262-PA 564 GH20262-PA 308..561 116..369 1324 95.7 Plus
Dgri\GH18766-PA 742 GH18766-PA 485..737 114..362 630 49.2 Plus
Dgri\GH20266-PA 1646 GH20266-PA 1391..1642 116..365 569 46.1 Plus
Dgri\GH20265-PA 250 GH20265-PA 6..248 125..366 568 45.5 Plus
Dgri\GH20260-PA 842 GH20260-PA 498..836 44..366 530 38.3 Plus
Dgri\GH20262-PA 564 GH20262-PA 39..131 23..115 469 90.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:01:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG8172-PD 371 CG8172-PD 1..371 1..371 2006 100 Plus
CG8172-PF 561 CG8172-PF 306..561 116..371 1392 100 Plus
CG8172-PE 545 CG8172-PE 290..545 116..371 1392 100 Plus
CG8172-PG 192 CG8172-PG 1..192 180..371 1045 100 Plus
Sb-PB 787 CG4316-PB 543..782 125..362 626 49.4 Plus
Sb-PA 787 CG4316-PA 543..782 125..362 626 49.4 Plus
CG8172-PE 545 CG8172-PE 1..115 1..115 614 100 Plus
Np-PB 1041 CG34350-PB 765..1039 100..366 574 42.4 Plus
Np-PA 1041 CG34350-PA 765..1039 100..366 574 42.4 Plus
lint-PC 1693 CG8213-PC 1435..1689 113..365 573 46.3 Plus
lint-PB 1674 CG8213-PB 1419..1670 116..365 567 46.5 Plus
CG8170-PA 855 CG8170-PA 511..849 44..366 549 38 Plus
CG8170-PB 778 CG8170-PB 501..772 96..366 521 40.4 Plus
CG13744-PA 389 CG13744-PA 15..387 39..369 495 31.8 Plus
CG4998-PA 891 CG4998-PA 651..886 134..365 464 36.7 Plus
CG4998-PB 1185 CG4998-PB 945..1180 134..365 464 36.7 Plus
CG3355-PA 314 CG3355-PA 65..308 113..368 459 41.2 Plus
CG9372-PA 408 CG9372-PA 130..402 94..362 454 34 Plus
CG11836-PI 281 CG11836-PI 19..276 101..368 447 35.2 Plus
CG11836-PJ 333 CG11836-PJ 71..328 101..368 447 35.2 Plus
Corin-PC 1397 CG2105-PC 1086..1348 112..367 439 36.6 Plus
Corin-PB 1397 CG2105-PB 1086..1348 112..367 439 36.6 Plus
l(2)k05911-PC 639 CG31728-PC 374..636 110..364 435 38.2 Plus
CG7432-PB 721 CG7432-PB 460..715 111..362 433 34.7 Plus
CG4613-PC 374 CG4613-PC 135..362 124..362 423 41.2 Plus
CG4613-PB 374 CG4613-PB 135..362 124..362 423 41.2 Plus
CG4386-PA 372 CG4386-PA 105..357 106..365 417 35.7 Plus
CG9294-PB 352 CG9294-PB 92..334 116..362 416 36.5 Plus
CG18735-PA 364 CG18735-PA 63..311 105..362 412 36.2 Plus
CG5390-PB 406 CG5390-PB 157..391 134..363 412 35.2 Plus
CG5390-PA 406 CG5390-PA 157..391 134..363 412 35.2 Plus
CG1299-PB 442 CG1299-PB 167..434 101..362 402 36.8 Plus
CG1299-PA 511 CG1299-PA 236..503 101..362 402 36.8 Plus
CG32260-PC 395 CG32260-PC 128..394 106..368 401 36.5 Plus
CG32260-PA 575 CG32260-PA 308..574 106..368 401 36.5 Plus
CG11836-PF 223 CG11836-PF 9..218 152..368 399 37.1 Plus
CG11836-PE 223 CG11836-PE 9..218 152..368 399 37.1 Plus
CG11836-PG 223 CG11836-PG 9..218 152..368 399 37.1 Plus
CG11836-PC 223 CG11836-PC 9..218 152..368 399 37.1 Plus
CG11836-PA 223 CG11836-PA 9..218 152..368 399 37.1 Plus
CG11836-PB 223 CG11836-PB 9..218 152..368 399 37.1 Plus
CG8299-PA 260 CG8299-PA 25..254 123..364 398 35.9 Plus
Sp7-PF 391 CG3066-PF 72..385 75..362 397 34.3 Plus
Sp7-PE 391 CG3066-PE 72..385 75..362 397 34.3 Plus
Sp7-PA 391 CG3066-PA 72..385 75..362 397 34.3 Plus
CG13318-PA 405 CG13318-PA 171..403 134..366 396 37.2 Plus
CG4914-PA 374 CG4914-PA 95..360 92..362 395 37.1 Plus
CG8586-PC 444 CG8586-PC 139..432 86..364 391 31.2 Plus
CG8586-PB 444 CG8586-PB 139..432 86..364 391 31.2 Plus
CG8586-PA 444 CG8586-PA 139..432 86..364 391 31.2 Plus
epsilonTry-PA 256 CG18681-PA 30..251 125..364 384 37.6 Plus
CG6865-PB 285 CG6865-PB 31..281 122..366 383 35.3 Plus
CG8172-PF 561 CG8172-PF 71..131 55..115 340 98.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 04:34:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19431-PA 551 GI19431-PA 295..549 116..370 1334 95.7 Plus
Dmoj\GI22656-PA 729 GI22656-PA 484..724 124..362 625 49.6 Plus
Dmoj\GI19434-PA 1755 GI19434-PA 1500..1751 116..365 571 46.1 Plus
Dmoj\GI19433-PA 250 GI19433-PA 6..248 125..366 570 45.9 Plus
Dmoj\GI19429-PA 864 GI19429-PA 520..858 44..366 531 38.3 Plus
Dmoj\GI19431-PA 551 GI19431-PA 27..124 18..115 494 90.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 04:34:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17746-PA 567 GL17746-PA 312..567 116..371 1353 96.5 Plus
Dper\GL12221-PA 628 GL12221-PA 383..623 124..362 629 50 Plus
Dper\GL17747-PA 996 GL17747-PA 743..994 116..366 579 44.7 Plus
Dper\GL17749-PA 1628 GL17749-PA 1373..1624 116..365 569 46.1 Plus
Dper\GL17746-PA 567 GL17746-PA 20..127 7..115 533 91.7 Plus
Dper\GL16860-PA 867 GL16860-PA 523..861 44..366 532 37.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 04:34:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20865-PC 381 GA20865-PC 27..381 17..371 1856 96.1 Plus
Dpse\GA20865-PA 567 GA20865-PA 312..567 116..371 1354 96.5 Plus
Dpse\GA20865-PB 572 GA20865-PB 317..572 116..371 1351 96.5 Plus
Dpse\GA18102-PB 746 GA18102-PB 501..741 124..362 628 50 Plus
Dpse\GA24897-PB 1090 GA24897-PB 837..1088 116..366 580 44.7 Plus
Dpse\GA20865-PA 567 GA20865-PA 18..125 7..115 533 91.7 Plus
Dpse\GA20865-PB 572 GA20865-PB 26..130 12..115 341 65.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 04:34:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20642-PA 537 GM20642-PA 348..537 182..371 1039 100 Plus
Dsec\GM24286-PA 778 GM24286-PA 533..773 124..362 621 49.2 Plus
Dsec\GM20642-PA 537 GM20642-PA 1..115 1..115 585 95.7 Plus
Dsec\GM20646-PA 1627 GM20646-PA 1372..1623 116..365 571 46.5 Plus
Dsec\GM20644-PA 250 GM20644-PA 6..248 125..366 569 45.5 Plus
Dsec\GM20640-PA 857 GM20640-PA 513..851 44..366 537 38 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 04:34:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10116-PA 589 GD10116-PA 334..589 116..371 1396 100 Plus
Dsim\GD19075-PA 772 GD19075-PA 527..767 124..362 622 49.2 Plus
Dsim\GD10120-PA 334 GD10120-PA 75..330 112..365 573 46.1 Plus
Dsim\GD10118-PA 250 GD10118-PA 6..248 125..366 568 45.5 Plus
Dsim\GD10116-PA 589 GD10116-PA 1..160 1..115 542 69.4 Plus
Dsim\GD10113-PA 857 GD10113-PA 513..851 44..366 530 37.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 04:34:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21185-PA 560 GJ21185-PA 304..558 116..370 1336 96.1 Plus
Dvir\GJ23384-PA 724 GJ23384-PA 479..719 124..362 631 50 Plus
Dvir\GJ21186-PA 1024 GJ21186-PA 771..1022 116..366 575 44.7 Plus
Dvir\GJ21187-PA 1690 GJ21187-PA 1435..1686 116..365 566 46.1 Plus
Dvir\GJ21183-PA 854 GJ21183-PA 510..848 44..366 529 38 Plus
Dvir\GJ21185-PA 560 GJ21185-PA 32..129 18..115 488 89.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 04:34:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17814-PA 616 GK17814-PA 310..614 80..370 1363 84.9 Plus
Dwil\GK13263-PA 798 GK13263-PA 553..793 124..362 628 49.6 Plus
Dwil\GK17817-PA 1623 GK17817-PA 1368..1619 116..365 572 46.1 Plus
Dwil\GK17815-PA 250 GK17815-PA 6..248 125..366 570 45.5 Plus
Dwil\GK17811-PA 1237 GK17811-PA 892..1231 44..366 531 38.2 Plus
Dwil\GK17814-PA 616 GK17814-PA 92..194 14..115 320 63.1 Plus
Dwil\GK17814-PA 616 GK17814-PA 24..59 20..55 167 86.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 04:34:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22664-PA 545 GE22664-PA 290..545 116..371 1383 98.8 Plus
Dyak\GE24370-PA 800 GE24370-PA 555..795 124..362 623 49.2 Plus
Dyak\GE22664-PA 545 GE22664-PA 1..115 1..115 599 97.4 Plus
Dyak\GE22684-PA 1680 GE22684-PA 1425..1676 116..365 571 46.5 Plus
Dyak\GE22674-PA 250 GE22674-PA 6..248 125..366 568 45.5 Plus
Dyak\GE22656-PA 859 GE22656-PA 515..853 44..366 537 38 Plus

LP12178.hyp Sequence

Translation from 327 to 1442

> LP12178.hyp
MRPPQQLLVLLLATVAAAGHSSYNSVYNEVIPPKLKQAIDQELPKEAKFF
DELDLIPQSCRFRGHKFECGLSISCVLGGGKPLDLCSGGMIWSCCVDKDL
DAEESPHAAPVNNTSCGEVYTRSNRIVGGHSTGFGSHPWQVALIKSGFLT
RKLSCGGALISNRWVITAAHCVASTPNSNMKIRLGEWDVRGQEERLNHEE
YGIERKEVHPHYNPADFVNDVALIRLDRNVVYKQHIIPVCLPPSTTKLTG
KMATVAGWGRTRHGQSTVPSVLQEVDVEVISNDRCQRWFRAAGRREAIHD
VFLCAGYKDGGRDSCQGDSGGPLTLTMDGRKTLIGLVSWGIGCGREHLPG
VYTNIQRFVPWINKVMANDNA*

LP12178.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:03:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG8172-PD 371 CG8172-PD 1..371 1..371 2006 100 Plus
CG8172-PE 545 CG8172-PE 290..545 116..371 1392 100 Plus
CG8172-PF 561 CG8172-PF 306..561 116..371 1392 100 Plus
CG8172-PG 192 CG8172-PG 1..192 180..371 1045 100 Plus
Sb-PB 787 CG4316-PB 543..782 125..362 626 49.4 Plus
CG8172-PE 545 CG8172-PE 1..115 1..115 614 100 Plus
CG8172-PF 561 CG8172-PF 71..131 55..115 340 98.4 Plus