BDGP Sequence Production Resources |
Search the DGRC for LP12254
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 122 |
Well: | 54 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9941-RA |
Protein status: | LP12254.pep: gold |
Sequenced Size: | 3197 |
Gene | Date | Evidence |
---|---|---|
CG9941 | 2009-02-12 | Manual selection by Sue Celniker |
3197 bp assembled on 2009-08-17
GenBank Submission: BT099613.1
> LP12254.complete AAAGGCAAATCAGAAATAATCAAGACATTGACCAACTTGTACTATTGCTA GTTTTGTGGACACAGGATCCAACACTTGAAGGCGACCACAGCTTTCGCAC ACTCACACACACACAGCGGCCATTTTCCGCCGAACAAGTGAAATGCCAAC ATGCCATTGTATGTGTGGTGGTGACCAACTGAAATAGAATAATAAACTAA ACCAAAGCGAAGAGAAAACGTAGGCCAAGAGCTATATTGGATCTGTGTCA CAGTTTTCCATAGCACCAACCTATCAAATGGGCAACTTTGTGAGCAGACA GAACGCGGCGGTGGAGGAGGCCGATCCGAGCACGAACAATGCCTACAAGT ATCCACCGAGAATGGGTAACTTCTTTGGCACCCACTTCATCATGGGCGGC GAGCGCTTCGACACGCCCCAACCGGAATCGTACTTGTTTGGCGAGAATGC GGATCTCAATTTCCTGGGCAATCGACCCACAGCCTTTCCGTATCCCCCGC CGCAGGCCAATGAACCGACGAAGACCCTGAAGAGTCTGGTCAACATTCGC AAGGAGTCGGTGCGTTTCGTCAAGACGATGAACGACAAGAAGCTGGGCGG TGTACTCGAGAAGCCCAAGATGAAGGAGATTGATCGGGACTTGGATCTGG ACAAGGAGAAGTCCAACGTGACCATCGAGGATGTGGATGGAAATGTGCTC TGCTCGATGGGTTTGGGTGGCGGTGATGCCGATATGACGCCCCCACCGCC GCCCTGCTCTTACAACATCGAGTTTACCTTTGACTCGGACGCCAAGTGCG CCATTACCATTTACTATTTCTGCTCGGAGGATGTCAGTCCCAGCGGCGTG ACACTGGTGCCGCGCGAGGGTCTCACCTCGGAGACGTACCACTACGAGAA GGGCATCAATCAGTGCTTCTCGCAGCCGAGCCATGTCTTCAATCCGCAGC AGATGCCCGAGGATGAACTGGGCTATAGTCCCGGCCGTGAACAGTATCCC GTGGCCATTCACTGTGTGGTGGAGGAGGGCAGCGACGAGTGTCGGCAATC GCACACCACCATCTGTGTGATCGATCATCATCCGGAAAACGGCAGCTATG TGCTGCGTGCATTGAAGCAAAAGATCTTTGTGGATGGCTTGTGCTACCTG CTACAGGAGATCTATGGCATCGAGAACAAGGCCGTGAACAAAACGTCTCT GGACGAGGAGATCGACGATCATGGCAGCGAGTGTGTTATTTGCATGAGTG AGACGAGGGATACGCTCATCCTGCCCTGCCGCCATCTCTGTTTGTGCAAT TCATGCGCGGATTCGCTGCGCTATCAGGCCAACAATTGTCCCATTTGTCG CGCTCCGTTTCGGGCGTTGCTTCAGATCCGTGCTGTCCAGAAGGGAATTA GCACGCATGTACTGCACCAGAACACGCCCACATCGGCGGCCGGGGAGCCG GCGCCAGTGGATGTTCCGCCAGGCTATATTCCAGTCTCACTAATTGAGGC ACTCAACGGACCGCCACAGTATGTGGCCAGGGCTAGGAACAGCGAACACG ATGTCACGGACTCAGCTGCCACCGTGGCCGCTTCGACAATGACCAGTGCT GACATCAAGGCCACATCGCCGATCAAGTCCAGCAGCCAGCGTCGACCGAA GATCAAGAAAAACGCTTCGACGTGCACGTCGACCAGTGAGGTGGGCACCA TTACCAATCAATCGGGCGGCGGCAATGGGTCATCCACACACTCTGTGGAG ATTGAAAGCGATCCGAAGAAGTCCAGCACGGCCACCTGTACTTCGCCAAC ATTGGGGGCATCCACTTCGCCGGAACCGAAACAGGACAAGCTGCAGATTG TTAACGAACGAAAGTATCCCAGATCCACAGCCGGTTCCGGTGGCGATGGC TCCGCGGGTACCGATGACGATGTGGACAGTGAGAACGAGAAGCTATCGCC TCTGCTATCACCCGGCAGCAAGAGCAAGAACGTTTCTAGCAAATCGCTGA AGCAGGTGGTGGCCTGCCTGGAAGCGGATGATGATGTCGATAATAAGAGC AGCACTGGTGATGGGCCGACCGAGGAGTCCAGCCTAAAGAAGGGTTCGTC GATAAAGCGCACCAAACCGAGACCAGAACTTAGCGGAAGCGGTGCACCCT CACCCGCCGAGGCCACGGCCGAGGATTCGGATTACTACACGCCGGAGGAT ACTCAGAATTCGATATTAAGCCCACTGTGCCCCACGGAGCGAGCCAAAAG CGGTGATCCCCTTGGCGCCGGCAGTCTGGGCAATGGCGGTCTCAGCGTGG GCAGGAGCGCAGGATCAGTGGGCGGACAAGCTGGAGTGGGACCCGTCGTT GTGGGTTTCAGTAGTGCAGTTAAGAAGAACCTGCACAAAAAGTCCACATC GGTGGGCAACATGGTGGGCTCCGGATCGGTGACAACGGTTGTGGACTTGA AGTCCAACAACGTAAGCTCCCTGCCAGACATGTTGGACAGCCCAATCAGC GGCAACTCGGCCTCGACGCGCAGCTCCAGTGATAGCTACTCCTCCAGTTC GTCCACCAAGCAGCTGCTCAGCTCCAATCCGACCACTACGGCGGCCAATA TTATCGTAGATGACAAGACAGCTCTGCAGAATGCCGTCAATGTTTAGAGC CGGTCTCGGTTGAATTTCGCGGAAATTCGTTTTCTCGTTTTAGCTTTGCG TTTATACTATTTATTCGGAGTTCACCTAGATTTAGTTAAATCAATGCTGC TTCCCCGCTCGCAGGAACAAATATTTTGAGGATTATATTAATATTAATAT TAATGGTAATGCTAATGATGATGATGATGATGATGATGATAATGATAATA CGGATAAGGATGGAACGGAGGAGGAGCAAGGAATAAGGCTACCAGGACGC AACACTTAACCAGTATACACAGTATATACATACATACAAACACTAACACC ACAGACACGAAAAGACACACGTCCCACATGCATGTGTGTGTATGTAGTTT AATCTAGTATAATGGCTTGGGTATATAACAAATAAAATAAATCCAATAAA CAACGGCGCCTAGGGCGCTACATTCCACAGTATAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9941-RA | 3190 | CG9941-RA | 73..3157 | 1..3085 | 15425 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 13611146..13612682 | 1537..1 | 7685 | 100 | Minus |
chrX | 22417052 | chrX | 13610140..13611082 | 2477..1535 | 4715 | 100 | Minus |
chrX | 22417052 | chrX | 13609469..13610078 | 3083..2474 | 3050 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 13720417..13721953 | 1537..1 | 7685 | 100 | Minus |
X | 23542271 | X | 13719411..13720353 | 2477..1535 | 4715 | 100 | Minus |
X | 23542271 | X | 13718738..13719349 | 3085..2474 | 3060 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 13728515..13730051 | 1537..1 | 7685 | 100 | Minus |
X | 23527363 | X | 13727509..13728451 | 2477..1535 | 4715 | 100 | Minus |
X | 23527363 | X | 13726836..13727447 | 3085..2474 | 3060 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
accord2 | 7650 | accord2 QBERT 7650bp | 5868..5959 | 2996..2900 | 148 | 66 | Minus |
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 41..86 | 2782..2827 | 122 | 73.9 | Plus |
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 7079..7124 | 2782..2827 | 122 | 73.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 13609469..13610074 | 2478..3083 | 100 | <- | Minus |
chrX | 13610140..13611080 | 1537..2477 | 100 | <- | Minus |
chrX | 13611147..13612682 | 1..1536 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9941-RA | 1..2370 | 278..2647 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9941-RA | 1..2370 | 278..2647 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9941-RA | 1..2370 | 278..2647 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9941-RA | 1..2370 | 278..2647 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9941-RA | 73..3155 | 1..3083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9941-RA | 73..3155 | 1..3083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9941-RA | 25..3107 | 1..3083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9941-RA | 25..3107 | 1..3083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13718740..13719345 | 2478..3083 | 100 | <- | Minus |
X | 13719411..13720351 | 1537..2477 | 100 | <- | Minus |
X | 13720418..13721953 | 1..1536 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13718740..13719345 | 2478..3083 | 100 | <- | Minus |
X | 13719411..13720351 | 1537..2477 | 100 | <- | Minus |
X | 13720418..13721953 | 1..1536 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13718740..13719345 | 2478..3083 | 100 | <- | Minus |
X | 13719411..13720351 | 1537..2477 | 100 | <- | Minus |
X | 13720418..13721953 | 1..1536 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 13612773..13613378 | 2478..3083 | 100 | <- | Minus |
arm_X | 13613444..13614384 | 1537..2477 | 100 | <- | Minus |
arm_X | 13614451..13615986 | 1..1536 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13726838..13727443 | 2478..3083 | 100 | <- | Minus |
X | 13727509..13728449 | 1537..2477 | 100 | <- | Minus |
X | 13728516..13730051 | 1..1536 | 100 | Minus |
Translation from 277 to 2646
> LP12254.hyp MGNFVSRQNAAVEEADPSTNNAYKYPPRMGNFFGTHFIMGGERFDTPQPE SYLFGENADLNFLGNRPTAFPYPPPQANEPTKTLKSLVNIRKESVRFVKT MNDKKLGGVLEKPKMKEIDRDLDLDKEKSNVTIEDVDGNVLCSMGLGGGD ADMTPPPPPCSYNIEFTFDSDAKCAITIYYFCSEDVSPSGVTLVPREGLT SETYHYEKGINQCFSQPSHVFNPQQMPEDELGYSPGREQYPVAIHCVVEE GSDECRQSHTTICVIDHHPENGSYVLRALKQKIFVDGLCYLLQEIYGIEN KAVNKTSLDEEIDDHGSECVICMSETRDTLILPCRHLCLCNSCADSLRYQ ANNCPICRAPFRALLQIRAVQKGISTHVLHQNTPTSAAGEPAPVDVPPGY IPVSLIEALNGPPQYVARARNSEHDVTDSAATVAASTMTSADIKATSPIK SSSQRRPKIKKNASTCTSTSEVGTITNQSGGGNGSSTHSVEIESDPKKSS TATCTSPTLGASTSPEPKQDKLQIVNERKYPRSTAGSGGDGSAGTDDDVD SENEKLSPLLSPGSKSKNVSSKSLKQVVACLEADDDVDNKSSTGDGPTEE SSLKKGSSIKRTKPRPELSGSGAPSPAEATAEDSDYYTPEDTQNSILSPL CPTERAKSGDPLGAGSLGNGGLSVGRSAGSVGGQAGVGPVVVGFSSAVKK NLHKKSTSVGNMVGSGSVTTVVDLKSNNVSSLPDMLDSPISGNSASTRSS SDSYSSSSSTKQLLSSNPTTTAANIIVDDKTALQNAVNV*
Translation from 277 to 2646
> LP12254.pep MGNFVSRQNAAVEEADPSTNNAYKYPPRMGNFFGTHFIMGGERFDTPQPE SYLFGENADLNFLGNRPTAFPYPPPQANEPTKTLKSLVNIRKESVRFVKT MNDKKLGGVLEKPKMKEIDRDLDLDKEKSNVTIEDVDGNVLCSMGLGGGD ADMTPPPPPCSYNIEFTFDSDAKCAITIYYFCSEDVSPSGVTLVPREGLT SETYHYEKGINQCFSQPSHVFNPQQMPEDELGYSPGREQYPVAIHCVVEE GSDECRQSHTTICVIDHHPENGSYVLRALKQKIFVDGLCYLLQEIYGIEN KAVNKTSLDEEIDDHGSECVICMSETRDTLILPCRHLCLCNSCADSLRYQ ANNCPICRAPFRALLQIRAVQKGISTHVLHQNTPTSAAGEPAPVDVPPGY IPVSLIEALNGPPQYVARARNSEHDVTDSAATVAASTMTSADIKATSPIK SSSQRRPKIKKNASTCTSTSEVGTITNQSGGGNGSSTHSVEIESDPKKSS TATCTSPTLGASTSPEPKQDKLQIVNERKYPRSTAGSGGDGSAGTDDDVD SENEKLSPLLSPGSKSKNVSSKSLKQVVACLEADDDVDNKSSTGDGPTEE SSLKKGSSIKRTKPRPELSGSGAPSPAEATAEDSDYYTPEDTQNSILSPL CPTERAKSGDPLGAGSLGNGGLSVGRSAGSVGGQAGVGPVVVGFSSAVKK NLHKKSTSVGNMVGSGSVTTVVDLKSNNVSSLPDMLDSPISGNSASTRSS SDSYSSSSSTKQLLSSNPTTTAANIIVDDKTALQNAVNV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22349-PA | 793 | GF22349-PA | 1..793 | 1..789 | 3169 | 85.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19492-PA | 790 | GG19492-PA | 1..790 | 1..789 | 4107 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11938-PA | 802 | GH11938-PA | 1..802 | 1..789 | 2723 | 70.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9941-PA | 789 | CG9941-PA | 1..789 | 1..789 | 4113 | 100 | Plus |
Muc68D-PB | 1514 | CG6004-PB | 393..760 | 420..772 | 162 | 21.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\moj152-PA | 778 | GI14142-PA | 1..778 | 1..789 | 2537 | 66.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19851-PA | 809 | GL19851-PA | 1..809 | 1..789 | 3062 | 79 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22141-PA | 809 | GA22141-PA | 1..809 | 1..789 | 3125 | 79.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24519-PA | 564 | GD24519-PA | 1..564 | 226..789 | 2890 | 98.4 | Plus |
Dsim\GD24520-PA | 168 | GD24520-PA | 1..157 | 1..157 | 855 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19082-PA | 782 | GJ19082-PA | 1..782 | 1..789 | 2539 | 67.4 | Plus |
Dvir\GJ19083-PA | 266 | GJ19083-PA | 13..266 | 415..657 | 385 | 44.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25125-PA | 782 | GK25125-PA | 1..782 | 1..789 | 2550 | 70.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16144-PA | 791 | GE16144-PA | 1..791 | 1..789 | 4082 | 98 | Plus |