BDGP Sequence Production Resources |
Search the DGRC for LP12385
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 123 |
Well: | 85 |
Vector: | pOT2 |
Associated Gene/Transcript | Cpr12A-RA |
Protein status: | LP12385.pep: gold |
Preliminary Size: | 654 |
Sequenced Size: | 876 |
Gene | Date | Evidence |
---|---|---|
CG15757 | 2002-01-01 | Sim4 clustering to Release 2 |
CG15757 | 2002-05-18 | Blastp of sequenced clone |
CG15757 | 2003-01-01 | Sim4 clustering to Release 3 |
Cpr12A | 2008-04-29 | Release 5.5 accounting |
Cpr12A | 2008-08-15 | Release 5.9 accounting |
Cpr12A | 2008-12-18 | 5.12 accounting |
876 bp (876 high quality bases) assembled on 2002-05-18
GenBank Submission: AY119097
> LP12385.complete AAACATCGCGCGACAGCACACACACCATCCACCTGCGTAGCCCAAACATC CCACACATCCATCCCACCACCACCCATAAATCACATTACATCCACATATC CACACACACATTCACACCGATCCGAGTTAAAATGGCCACTTCCGGTTCGA TCCTGTTCGCCATCTTCCTGCTGAGCGCCACCCTCATTTCCGCCCAGCAG ATCAAAGAGTCGGCGCCCAGTGCGCGATTACTAGATCGATTCGATAACCG ATATCCCGACGGCAGCTACGAGTATCGATTCGAGTTGGACGATGGAACCG CTCGCTATGAACGTGGATATTTCGTTAAGATCAACGATGTAAAGACCCTG ATGGTTGTGGGCTACTATGCCTATCGGATGACCGACGGGCGTTACATCAC CGTCTTCTACAATGCCGATCAGTTTGGCTATCGACAGAATCAGTCGATCA CGCCGCAGGAATATCCCAATCTGCCGCGTTCCATCGAGGTGCCCATGGTC AGCGAGGCATCTGCGGCATCCGCGGCATCTGATGGCGTCTCCAGTTCCCA GTTCCAATCTCAGTTTCAATCCCGTCTGGATGCCCATGGTAACCCCTCCA TCACGACGACCACGCCCAGGGGGGCGGGGACAAATCGTAGGGGCCGCTAC TGAGAGTTCGTAATTGCACACCATGCCCATTATTATTATTGGCTCCCTAC ATCGTTTTTTATACCTTATTTTATTATTTTTTTTTTTTAATTTTGTGCCC CCGACTACTCGTATTATATTATTATGAATTTAATTTCTGTCCACATTTTT GTTGTGTTCAATGAAATGGGATTAAAAAATAATAAAAATTTATTAAGGCA AAGCAGCGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cpr12A-RA | 921 | Cpr12A-RA | 52..914 | 1..863 | 4315 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 1065..1190 | 679..805 | 164 | 60.9 | Plus |
HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 1086..1214 | 716..845 | 160 | 62.1 | Plus |
HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 1102..1213 | 679..785 | 151 | 63.4 | Plus |
HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 1079..1245 | 679..844 | 130 | 57.3 | Plus |
HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 1061..1200 | 704..845 | 127 | 58 | Plus |
Tabor | 7345 | Tabor TABOR 7345bp | 1388..1537 | 815..663 | 119 | 58 | Minus |
Juan | 4236 | Juan JUAN 4236bp | 4046..4191 | 858..698 | 113 | 58.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 13434403..13434846 | 1..444 | 99 | -> | Plus |
chrX | 13435255..13435625 | 445..815 | 91 | <- | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr12A-RA | 1..522 | 132..653 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr12A-RA | 1..522 | 132..653 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr12A-RA | 1..522 | 132..653 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr12A-RA | 1..522 | 132..653 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr12A-RA | 1..522 | 132..653 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr12A-RA | 1..858 | 1..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr12A-RA | 1..858 | 1..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr12A-RA | 1..858 | 1..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr12A-RA | 1..858 | 1..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr12A-RA | 1..858 | 1..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13543643..13544086 | 1..444 | 100 | -> | Plus |
X | 13544494..13544907 | 445..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13543643..13544086 | 1..444 | 100 | -> | Plus |
X | 13544494..13544907 | 445..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13543643..13544086 | 1..444 | 100 | -> | Plus |
X | 13544494..13544907 | 445..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 13438527..13438940 | 445..858 | 100 | Plus | |
arm_X | 13437676..13438119 | 1..444 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13551741..13552184 | 1..444 | 100 | -> | Plus |
X | 13552592..13553005 | 445..858 | 100 | Plus |
Translation from 2 to 652
> LP12385.hyp TSRDSTHTIHLRSPNIPHIHPTTTHKSHYIHISTHTFTPIRVKMATSGSI LFAIFLLSATLISAQQIKESAPSARLLDRFDNRYPDGSYEYRFELDDGTA RYERGYFVKINDVKTLMVVGYYAYRMTDGRYITVFYNADQFGYRQNQSIT PQEYPNLPRSIEVPMVSEASAASAASDGVSSSQFQSQFQSRLDAHGNPSI TTTTPRGAGTNRRGRY*
Translation from 131 to 652
> LP12385.pep MATSGSILFAIFLLSATLISAQQIKESAPSARLLDRFDNRYPDGSYEYRF ELDDGTARYERGYFVKINDVKTLMVVGYYAYRMTDGRYITVFYNADQFGY RQNQSITPQEYPNLPRSIEVPMVSEASAASAASDGVSSSQFQSQFQSRLD AHGNPSITTTTPRGAGTNRRGRY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22573-PA | 170 | GF22573-PA | 1..132 | 1..126 | 547 | 81.1 | Plus |
Dana\GF22572-PA | 277 | GF22572-PA | 92..185 | 30..123 | 215 | 43.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17788-PA | 173 | GG17788-PA | 1..173 | 1..173 | 740 | 93.1 | Plus |
Dere\GG17787-PA | 298 | GG17787-PA | 92..185 | 30..123 | 223 | 45.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12498-PA | 166 | GH12498-PA | 11..166 | 10..173 | 474 | 58.4 | Plus |
Dgri\GH12497-PA | 280 | GH12497-PA | 74..181 | 26..132 | 197 | 38.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cpr12A-PA | 173 | CG15757-PA | 1..173 | 1..173 | 886 | 100 | Plus |
CG15756-PA | 298 | CG15756-PA | 80..185 | 18..123 | 223 | 41.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14849-PA | 191 | GI14849-PA | 36..135 | 28..127 | 455 | 82 | Plus |
Dmoj\GI14848-PA | 287 | GI14848-PA | 57..164 | 18..121 | 182 | 35.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20236-PA | 190 | GL20236-PA | 12..187 | 6..171 | 511 | 61.4 | Plus |
Dper\GL20235-PA | 294 | GL20235-PA | 95..195 | 32..132 | 214 | 39.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13937-PA | 190 | GA13937-PA | 46..187 | 31..171 | 507 | 71.1 | Plus |
Dpse\GA13936-PA | 294 | GA13936-PA | 85..214 | 22..150 | 221 | 35.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17614-PA | 173 | GM17614-PA | 1..173 | 1..173 | 884 | 97.7 | Plus |
Dsec\GM17612-PA | 300 | GM17612-PA | 92..183 | 30..121 | 215 | 44.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17132-PA | 173 | GD17132-PA | 1..173 | 1..173 | 884 | 97.7 | Plus |
Dsim\GD17131-PA | 213 | GD17131-PA | 92..163 | 30..101 | 177 | 45.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19510-PA | 184 | GJ19510-PA | 40..184 | 31..173 | 475 | 65.5 | Plus |
Dvir\GJ19507-PA | 302 | GJ19507-PA | 93..182 | 32..121 | 222 | 45.6 | Plus |